Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_L01
(861 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein. 34 0.58
L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated prote... 34 0.58
AB208784-1|BAD92021.1| 222|Homo sapiens zinc finger protein 76 ... 32 3.1
D64159-1|BAA21515.1| 709|Homo sapiens hypothetical protein prot... 31 5.4
BC132736-1|AAI32737.1| 1843|Homo sapiens coiled-coil domain cont... 31 5.4
BC078168-1|AAH78168.1| 887|Homo sapiens CCDC88A protein protein. 31 5.4
BC060037-1|AAH60037.1| 622|Homo sapiens CCDC88A protein protein. 31 5.4
AF112218-1|AAF17206.1| 742|Homo sapiens unknown protein. 31 5.4
AB201172-1|BAE44387.1| 1870|Homo sapiens girdin protein. 31 5.4
AB125644-1|BAF44475.1| 1843|Homo sapiens PKB/Akt-binding protein... 31 5.4
D87448-1|BAA13389.1| 1550|Homo sapiens KIAA0259 protein. 30 9.4
BC151237-1|AAI51238.1| 1435|Homo sapiens topoisomerase (DNA) II ... 30 9.4
BC126209-1|AAI26210.2| 1435|Homo sapiens topoisomerase (DNA) II ... 30 9.4
BC044830-1|AAH44830.1| 258|Homo sapiens chromosome 10 open read... 30 9.4
AY497060-1|AAS45485.1| 1472|Homo sapiens bromodomain and WD repe... 30 9.4
AY497059-1|AAS45484.1| 1398|Homo sapiens bromodomain and WD repe... 30 9.4
AY497058-1|AAS45483.1| 1398|Homo sapiens bromodomain and WD repe... 30 9.4
AY497057-1|AAS45482.1| 1398|Homo sapiens bromodomain and WD repe... 30 9.4
AY497056-1|AAS45481.1| 1398|Homo sapiens bromodomain and WD repe... 30 9.4
AY497055-1|AAS45480.1| 1472|Homo sapiens bromodomain and WD repe... 30 9.4
AY497054-1|AAS45479.1| 1472|Homo sapiens bromodomain and WD repe... 30 9.4
AY497053-1|AAS45478.1| 1472|Homo sapiens bromodomain and WD repe... 30 9.4
AY497052-1|AAS45477.1| 1398|Homo sapiens bromodomain and WD repe... 30 9.4
AY497051-1|AAS45476.1| 1398|Homo sapiens bromodomain and WD repe... 30 9.4
AY497050-1|AAS45475.1| 1398|Homo sapiens bromodomain and WD repe... 30 9.4
AY497049-1|AAS45474.1| 1398|Homo sapiens bromodomain and WD repe... 30 9.4
AY497048-1|AAS45473.1| 1398|Homo sapiens bromodomain and WD repe... 30 9.4
AY497047-1|AAS45472.1| 1631|Homo sapiens bromodomain and WD repe... 30 9.4
AY497046-1|AAS45471.1| 1802|Homo sapiens bromodomain and WD repe... 30 9.4
AY026763-1|AAK07687.1| 638|Homo sapiens gene overexpressed in a... 30 9.4
AL669934-1|CAI95405.1| 1802|Homo sapiens bromodomain and WD repe... 30 9.4
AL590031-1|CAI39936.2| 1802|Homo sapiens bromodomain and WD repe... 30 9.4
AL512504-2|CAI95143.1| 1802|Homo sapiens bromodomain and WD repe... 30 9.4
AL137265-1|CAB70664.1| 992|Homo sapiens hypothetical protein pr... 30 9.4
AK125995-1|BAC86384.1| 842|Homo sapiens protein ( Homo sapiens ... 30 9.4
AK096702-1|BAC04846.1| 274|Homo sapiens protein ( Homo sapiens ... 30 9.4
AK095887-1|BAC04641.1| 699|Homo sapiens protein ( Homo sapiens ... 30 9.4
AB028975-1|BAA83004.2| 1456|Homo sapiens KIAA1052 protein protein. 30 9.4
AB019397-1|BAA34202.1| 1435|Homo sapiens DNA topoisomerase II bi... 30 9.4
>X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.
Length = 1411
Score = 34.3 bits (75), Expect = 0.58
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +1
Query: 370 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQESXKL 537
D K ++L+ S+ E+ ++ + A D+EK L+ +LQ + NT++E +L
Sbjct: 860 DKLSKVSDSLKNSKSEFEKENQKGKAAILDLEKTCKELKHQLQVQMENTLKEQKEL 915
>L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated protein
protein.
Length = 1410
Score = 34.3 bits (75), Expect = 0.58
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +1
Query: 370 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQESXKL 537
D K ++L+ S+ E+ ++ + A D+EK L+ +LQ + NT++E +L
Sbjct: 860 DKLSKVSDSLKNSKSEFEKENQKGKAAILDLEKTCKELKHQLQVQMENTLKEQKEL 915
>AB208784-1|BAD92021.1| 222|Homo sapiens zinc finger protein 76
(expressed in testis) variant protein.
Length = 222
Score = 31.9 bits (69), Expect = 3.1
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 439 APRPCARCSASTVPKPPWPCRSRLRALPWR 350
+P P A + T PPWPC S + WR
Sbjct: 162 SPTPAAPAARPTGRPPPWPCTSAVPMASWR 191
>D64159-1|BAA21515.1| 709|Homo sapiens hypothetical protein
protein.
Length = 709
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 400 EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQESXKLXXKVSS 555
+QS QN + +++L K +EK LRE + + QE+ L VSS
Sbjct: 443 KQSLQNCQNLSKDLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSS 494
>BC132736-1|AAI32737.1| 1843|Homo sapiens coiled-coil domain
containing 88A protein.
Length = 1843
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 400 EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQESXKLXXKVSS 555
+QS QN + +++L K +EK LRE + + QE+ L VSS
Sbjct: 518 KQSLQNCQNLSKDLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSS 569
>BC078168-1|AAH78168.1| 887|Homo sapiens CCDC88A protein protein.
Length = 887
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 400 EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQESXKLXXKVSS 555
+QS QN + +++L K +EK LRE + + QE+ L VSS
Sbjct: 515 KQSLQNCQNLSKDLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSS 566
>BC060037-1|AAH60037.1| 622|Homo sapiens CCDC88A protein protein.
Length = 622
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 400 EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQESXKLXXKVSS 555
+QS QN + +++L K +EK LRE + + QE+ L VSS
Sbjct: 518 KQSLQNCQNLSKDLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSS 569
>AF112218-1|AAF17206.1| 742|Homo sapiens unknown protein.
Length = 742
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 400 EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQESXKLXXKVSS 555
+QS QN + +++L K +EK LRE + + QE+ L VSS
Sbjct: 443 KQSLQNCQNLSKDLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSS 494
>AB201172-1|BAE44387.1| 1870|Homo sapiens girdin protein.
Length = 1870
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 400 EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQESXKLXXKVSS 555
+QS QN + +++L K +EK LRE + + QE+ L VSS
Sbjct: 518 KQSLQNCQNLSKDLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSS 569
>AB125644-1|BAF44475.1| 1843|Homo sapiens PKB/Akt-binding protein
protein.
Length = 1843
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 400 EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQESXKLXXKVSS 555
+QS QN + +++L K +EK LRE + + QE+ L VSS
Sbjct: 518 KQSLQNCQNLSKDLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSS 569
>D87448-1|BAA13389.1| 1550|Homo sapiens KIAA0259 protein.
Length = 1550
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +1
Query: 289 QGLEGRLRXPCCNSSTPSPRVSRXALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEK 468
QG L CNS++ +P +R A + EAL QSRQ + E + +
Sbjct: 1116 QGQRTSLSRSGCNSASSTPDSTRSARS-GRSRVLEALRQSRQTVPDVNTEPSQNEQIIWD 1174
Query: 469 NATALREKLQAA 504
+ TA E+ + A
Sbjct: 1175 DPTAREERARLA 1186
>BC151237-1|AAI51238.1| 1435|Homo sapiens topoisomerase (DNA) II
binding protein 1 protein.
Length = 1435
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +1
Query: 289 QGLEGRLRXPCCNSSTPSPRVSRXALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEK 468
QG L CNS++ +P +R A + EAL QSRQ + E + +
Sbjct: 1001 QGQRTSLSRSGCNSASSTPDSTRSARS-GRSRVLEALRQSRQTVPDVNTEPSQNEQIIWD 1059
Query: 469 NATALREKLQAA 504
+ TA E+ + A
Sbjct: 1060 DPTAREERARLA 1071
>BC126209-1|AAI26210.2| 1435|Homo sapiens topoisomerase (DNA) II
binding protein 1 protein.
Length = 1435
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +1
Query: 289 QGLEGRLRXPCCNSSTPSPRVSRXALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEK 468
QG L CNS++ +P +R A + EAL QSRQ + E + +
Sbjct: 1001 QGQRTSLSRSGCNSASSTPDSTRSARS-GRSRVLEALRQSRQTVPDVNTEPSQNEQIIWD 1059
Query: 469 NATALREKLQAA 504
+ TA E+ + A
Sbjct: 1060 DPTAREERARLA 1071
>BC044830-1|AAH44830.1| 258|Homo sapiens chromosome 10 open reading
frame 96 protein.
Length = 258
Score = 30.3 bits (65), Expect = 9.4
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 391 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQESXKLXXKV 549
E+L Q E AEE R+ +V T REK++ A +E KL KV
Sbjct: 4 ESLFQHIIFTEHQAEESRRLMREVRSEITRCREKIKKATEELNEEKIKLESKV 56
>AY497060-1|AAS45485.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-P protein.
Length = 1472
Score = 30.3 bits (65), Expect = 9.4
Identities = 27/106 (25%), Positives = 43/106 (40%)
Frame = +2
Query: 77 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*QQQFNS 256
ISS+ ++ H Q+ ++H + PRS AT R + R + + + Q
Sbjct: 360 ISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEEC 419
Query: 257 LTKSKDAQDFSKAWKDGSEXRAATAQRLRQESPGXRSETRTARPRR 394
T D + S + + + T QR E RS RT R R+
Sbjct: 420 RTAKGDI-EISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQ 464
>AY497059-1|AAS45484.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-O protein.
Length = 1398
Score = 30.3 bits (65), Expect = 9.4
Identities = 27/106 (25%), Positives = 43/106 (40%)
Frame = +2
Query: 77 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*QQQFNS 256
ISS+ ++ H Q+ ++H + PRS AT R + R + + + Q
Sbjct: 286 ISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEEC 345
Query: 257 LTKSKDAQDFSKAWKDGSEXRAATAQRLRQESPGXRSETRTARPRR 394
T D + S + + + T QR E RS RT R R+
Sbjct: 346 RTAKGDI-EISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQ 390
>AY497058-1|AAS45483.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-N protein.
Length = 1398
Score = 30.3 bits (65), Expect = 9.4
Identities = 27/106 (25%), Positives = 43/106 (40%)
Frame = +2
Query: 77 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*QQQFNS 256
ISS+ ++ H Q+ ++H + PRS AT R + R + + + Q
Sbjct: 286 ISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEEC 345
Query: 257 LTKSKDAQDFSKAWKDGSEXRAATAQRLRQESPGXRSETRTARPRR 394
T D + S + + + T QR E RS RT R R+
Sbjct: 346 RTAKGDI-EISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQ 390
>AY497057-1|AAS45482.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-M protein.
Length = 1398
Score = 30.3 bits (65), Expect = 9.4
Identities = 27/106 (25%), Positives = 43/106 (40%)
Frame = +2
Query: 77 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*QQQFNS 256
ISS+ ++ H Q+ ++H + PRS AT R + R + + + Q
Sbjct: 286 ISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEEC 345
Query: 257 LTKSKDAQDFSKAWKDGSEXRAATAQRLRQESPGXRSETRTARPRR 394
T D + S + + + T QR E RS RT R R+
Sbjct: 346 RTAKGDI-EISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQ 390
>AY497056-1|AAS45481.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-L protein.
Length = 1398
Score = 30.3 bits (65), Expect = 9.4
Identities = 27/106 (25%), Positives = 43/106 (40%)
Frame = +2
Query: 77 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*QQQFNS 256
ISS+ ++ H Q+ ++H + PRS AT R + R + + + Q
Sbjct: 286 ISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEEC 345
Query: 257 LTKSKDAQDFSKAWKDGSEXRAATAQRLRQESPGXRSETRTARPRR 394
T D + S + + + T QR E RS RT R R+
Sbjct: 346 RTAKGDI-EISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQ 390
>AY497055-1|AAS45480.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-K protein.
Length = 1472
Score = 30.3 bits (65), Expect = 9.4
Identities = 27/106 (25%), Positives = 43/106 (40%)
Frame = +2
Query: 77 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*QQQFNS 256
ISS+ ++ H Q+ ++H + PRS AT R + R + + + Q
Sbjct: 360 ISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEEC 419
Query: 257 LTKSKDAQDFSKAWKDGSEXRAATAQRLRQESPGXRSETRTARPRR 394
T D + S + + + T QR E RS RT R R+
Sbjct: 420 RTAKGDI-EISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQ 464
>AY497054-1|AAS45479.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-I protein.
Length = 1472
Score = 30.3 bits (65), Expect = 9.4
Identities = 27/106 (25%), Positives = 43/106 (40%)
Frame = +2
Query: 77 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*QQQFNS 256
ISS+ ++ H Q+ ++H + PRS AT R + R + + + Q
Sbjct: 360 ISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEEC 419
Query: 257 LTKSKDAQDFSKAWKDGSEXRAATAQRLRQESPGXRSETRTARPRR 394
T D + S + + + T QR E RS RT R R+
Sbjct: 420 RTAKGDI-EISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQ 464
>AY497053-1|AAS45478.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-H protein.
Length = 1472
Score = 30.3 bits (65), Expect = 9.4
Identities = 27/106 (25%), Positives = 43/106 (40%)
Frame = +2
Query: 77 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*QQQFNS 256
ISS+ ++ H Q+ ++H + PRS AT R + R + + + Q
Sbjct: 360 ISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEEC 419
Query: 257 LTKSKDAQDFSKAWKDGSEXRAATAQRLRQESPGXRSETRTARPRR 394
T D + S + + + T QR E RS RT R R+
Sbjct: 420 RTAKGDI-EISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQ 464
>AY497052-1|AAS45477.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-G protein.
Length = 1398
Score = 30.3 bits (65), Expect = 9.4
Identities = 27/106 (25%), Positives = 43/106 (40%)
Frame = +2
Query: 77 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*QQQFNS 256
ISS+ ++ H Q+ ++H + PRS AT R + R + + + Q
Sbjct: 286 ISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEEC 345
Query: 257 LTKSKDAQDFSKAWKDGSEXRAATAQRLRQESPGXRSETRTARPRR 394
T D + S + + + T QR E RS RT R R+
Sbjct: 346 RTAKGDI-EISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQ 390
>AY497051-1|AAS45476.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-F protein.
Length = 1398
Score = 30.3 bits (65), Expect = 9.4
Identities = 27/106 (25%), Positives = 43/106 (40%)
Frame = +2
Query: 77 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*QQQFNS 256
ISS+ ++ H Q+ ++H + PRS AT R + R + + + Q
Sbjct: 286 ISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEEC 345
Query: 257 LTKSKDAQDFSKAWKDGSEXRAATAQRLRQESPGXRSETRTARPRR 394
T D + S + + + T QR E RS RT R R+
Sbjct: 346 RTAKGDI-EISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQ 390
>AY497050-1|AAS45475.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-E protein.
Length = 1398
Score = 30.3 bits (65), Expect = 9.4
Identities = 27/106 (25%), Positives = 43/106 (40%)
Frame = +2
Query: 77 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*QQQFNS 256
ISS+ ++ H Q+ ++H + PRS AT R + R + + + Q
Sbjct: 286 ISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEEC 345
Query: 257 LTKSKDAQDFSKAWKDGSEXRAATAQRLRQESPGXRSETRTARPRR 394
T D + S + + + T QR E RS RT R R+
Sbjct: 346 RTAKGDI-EISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQ 390
>AY497049-1|AAS45474.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-D protein.
Length = 1398
Score = 30.3 bits (65), Expect = 9.4
Identities = 27/106 (25%), Positives = 43/106 (40%)
Frame = +2
Query: 77 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*QQQFNS 256
ISS+ ++ H Q+ ++H + PRS AT R + R + + + Q
Sbjct: 286 ISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEEC 345
Query: 257 LTKSKDAQDFSKAWKDGSEXRAATAQRLRQESPGXRSETRTARPRR 394
T D + S + + + T QR E RS RT R R+
Sbjct: 346 RTAKGDI-EISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQ 390
>AY497048-1|AAS45473.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-C protein.
Length = 1398
Score = 30.3 bits (65), Expect = 9.4
Identities = 27/106 (25%), Positives = 43/106 (40%)
Frame = +2
Query: 77 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*QQQFNS 256
ISS+ ++ H Q+ ++H + PRS AT R + R + + + Q
Sbjct: 286 ISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEEC 345
Query: 257 LTKSKDAQDFSKAWKDGSEXRAATAQRLRQESPGXRSETRTARPRR 394
T D + S + + + T QR E RS RT R R+
Sbjct: 346 RTAKGDI-EISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQ 390
>AY497047-1|AAS45472.1| 1631|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-B protein.
Length = 1631
Score = 30.3 bits (65), Expect = 9.4
Identities = 27/106 (25%), Positives = 43/106 (40%)
Frame = +2
Query: 77 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*QQQFNS 256
ISS+ ++ H Q+ ++H + PRS AT R + R + + + Q
Sbjct: 519 ISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEEC 578
Query: 257 LTKSKDAQDFSKAWKDGSEXRAATAQRLRQESPGXRSETRTARPRR 394
T D + S + + + T QR E RS RT R R+
Sbjct: 579 RTAKGDI-EISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQ 623
>AY497046-1|AAS45471.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-A protein.
Length = 1802
Score = 30.3 bits (65), Expect = 9.4
Identities = 27/106 (25%), Positives = 43/106 (40%)
Frame = +2
Query: 77 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*QQQFNS 256
ISS+ ++ H Q+ ++H + PRS AT R + R + + + Q
Sbjct: 690 ISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEEC 749
Query: 257 LTKSKDAQDFSKAWKDGSEXRAATAQRLRQESPGXRSETRTARPRR 394
T D + S + + + T QR E RS RT R R+
Sbjct: 750 RTAKGDI-EISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQ 794
>AY026763-1|AAK07687.1| 638|Homo sapiens gene overexpressed in
astrocytoma protein.
Length = 638
Score = 30.3 bits (65), Expect = 9.4
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -3
Query: 439 APRPCARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTXLGAVLPSLAEVL 278
AP P A + +VP+P PC PW + + C + GA LP+ L
Sbjct: 96 APEPSAPSALPSVPEPSAPCAPE----PWPAGEEPVRCDACPEGAALPAALSCL 145
>AL669934-1|CAI95405.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 30.3 bits (65), Expect = 9.4
Identities = 27/106 (25%), Positives = 43/106 (40%)
Frame = +2
Query: 77 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*QQQFNS 256
ISS+ ++ H Q+ ++H + PRS AT R + R + + + Q
Sbjct: 690 ISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEEC 749
Query: 257 LTKSKDAQDFSKAWKDGSEXRAATAQRLRQESPGXRSETRTARPRR 394
T D + S + + + T QR E RS RT R R+
Sbjct: 750 RTAKGDI-EISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQ 794
>AL590031-1|CAI39936.2| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 30.3 bits (65), Expect = 9.4
Identities = 27/106 (25%), Positives = 43/106 (40%)
Frame = +2
Query: 77 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*QQQFNS 256
ISS+ ++ H Q+ ++H + PRS AT R + R + + + Q
Sbjct: 690 ISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEEC 749
Query: 257 LTKSKDAQDFSKAWKDGSEXRAATAQRLRQESPGXRSETRTARPRR 394
T D + S + + + T QR E RS RT R R+
Sbjct: 750 RTAKGDI-EISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQ 794
>AL512504-2|CAI95143.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 30.3 bits (65), Expect = 9.4
Identities = 27/106 (25%), Positives = 43/106 (40%)
Frame = +2
Query: 77 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*QQQFNS 256
ISS+ ++ H Q+ ++H + PRS AT R + R + + + Q
Sbjct: 690 ISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEEC 749
Query: 257 LTKSKDAQDFSKAWKDGSEXRAATAQRLRQESPGXRSETRTARPRR 394
T D + S + + + T QR E RS RT R R+
Sbjct: 750 RTAKGDI-EISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQ 794
>AL137265-1|CAB70664.1| 992|Homo sapiens hypothetical protein
protein.
Length = 992
Score = 30.3 bits (65), Expect = 9.4
Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 388 KEALEQSRQNI-ERTAEELRKAHPDVEKNATALREKLQAAV 507
+E ++Q R+ + + EE+ + H E++ ++LRE+LQ A+
Sbjct: 389 QEKMQQLREKLCQEEEEEILRLHQQKEQSLSSLRERLQKAI 429
>AK125995-1|BAC86384.1| 842|Homo sapiens protein ( Homo sapiens
cDNA FLJ44007 fis, clone TESTI4023762. ).
Length = 842
Score = 30.3 bits (65), Expect = 9.4
Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 388 KEALEQSRQNI-ERTAEELRKAHPDVEKNATALREKLQAAV 507
+E ++Q R+ + + EE+ + H E++ ++LRE+LQ A+
Sbjct: 497 QEKMQQLREKLCQEEEEEILRLHQQKEQSLSSLRERLQKAI 537
>AK096702-1|BAC04846.1| 274|Homo sapiens protein ( Homo sapiens
cDNA FLJ39383 fis, clone PERIC2000478, weakly similar to
Rattus norvegicus Jun dimerization protein 1 (jdp-1)
gene. ).
Length = 274
Score = 30.3 bits (65), Expect = 9.4
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 382 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQA 501
K + A ++SRQ A+ L + H +EK+ ALR+++Q+
Sbjct: 26 KNRAAAQRSRQKHTDKADALHQQHESLEKDNLALRKEIQS 65
>AK095887-1|BAC04641.1| 699|Homo sapiens protein ( Homo sapiens
cDNA FLJ38568 fis, clone HCHON2005987. ).
Length = 699
Score = 30.3 bits (65), Expect = 9.4
Identities = 27/106 (25%), Positives = 43/106 (40%)
Frame = +2
Query: 77 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*QQQFNS 256
ISS+ ++ H Q+ ++H + PRS AT R + R + + + Q
Sbjct: 3 ISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEEC 62
Query: 257 LTKSKDAQDFSKAWKDGSEXRAATAQRLRQESPGXRSETRTARPRR 394
T D + S + + + T QR E RS RT R R+
Sbjct: 63 RTAKGDI-EISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQ 107
>AB028975-1|BAA83004.2| 1456|Homo sapiens KIAA1052 protein protein.
Length = 1456
Score = 30.3 bits (65), Expect = 9.4
Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 388 KEALEQSRQNI-ERTAEELRKAHPDVEKNATALREKLQAAV 507
+E ++Q R+ + + EE+ + H E++ ++LRE+LQ A+
Sbjct: 619 QEKMQQLREKLCQEEEEEILRLHQQKEQSLSSLRERLQKAI 659
>AB019397-1|BAA34202.1| 1435|Homo sapiens DNA topoisomerase II binding
protein protein.
Length = 1435
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +1
Query: 289 QGLEGRLRXPCCNSSTPSPRVSRXALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEK 468
QG L CNS++ +P +R A + EAL QSRQ + E + +
Sbjct: 1001 QGQRTSLSRSGCNSASSTPDSTRSARS-GRSRVLEALRQSRQTVPDVNTEPSQNEQIIWD 1059
Query: 469 NATALREKLQAA 504
+ TA E+ + A
Sbjct: 1060 DPTAREERARLA 1071
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,968,638
Number of Sequences: 237096
Number of extensions: 1466991
Number of successful extensions: 6026
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 4815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5927
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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