Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_L01
(861 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 34 0.15
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 34 0.15
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 34 0.15
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 34 0.15
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 34 0.15
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory car... 29 4.3
AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synapt... 29 4.3
Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical p... 29 5.6
Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical p... 29 5.6
Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical p... 29 5.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.6
AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kin... 29 5.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 7.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 7.4
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 28 7.4
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 9.8
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 28 9.8
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +1
Query: 382 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQESXKLXXKVSSNV 561
K E L++ + + +E+LRK V+ + ++ VQE KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 562 XETNXKLA 585
ET K++
Sbjct: 2604 EETRAKIS 2611
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +1
Query: 382 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQESXKLXXKVSSNV 561
K E L++ + + +E+LRK V+ + ++ VQE KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 562 XETNXKLA 585
ET K++
Sbjct: 2604 EETRAKIS 2611
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +1
Query: 382 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQESXKLXXKVSSNV 561
K E L++ + + +E+LRK V+ + ++ VQE KL ++ +N+
Sbjct: 358 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 417
Query: 562 XETNXKLA 585
ET K++
Sbjct: 418 EETRAKIS 425
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +1
Query: 382 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQESXKLXXKVSSNV 561
K E L++ + + +E+LRK V+ + ++ VQE KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 562 XETNXKLA 585
ET K++
Sbjct: 2604 EETRAKIS 2611
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +1
Query: 382 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQESXKLXXKVSSNV 561
K E L++ + + +E+LRK V+ + ++ VQE KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 562 XETNXKLA 585
ET K++
Sbjct: 2604 EETRAKIS 2611
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 364 LGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQA 501
+G A E +Q N+ + ++ K H DV+ ++ALR L A
Sbjct: 24 IGKAKATQDEVFDQHAANLNKQSKSCEKLHKDVKNYSSALRTLLSA 69
>AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory
carrier membrane protein protein.
Length = 335
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/48 (25%), Positives = 29/48 (60%)
Frame = +1
Query: 325 NSSTPSPRVSRXALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEK 468
+++ P+ S +LG+ + + L + +Q++ER A+ELR ++++
Sbjct: 47 SNAQPTTHQSTGSLGNKSAGMDDELFRKQQDLERRAQELRMREEELDR 94
>AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synaptic
vesicle protein)homolog protein 1 protein.
Length = 335
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/48 (25%), Positives = 29/48 (60%)
Frame = +1
Query: 325 NSSTPSPRVSRXALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEK 468
+++ P+ S +LG+ + + L + +Q++ER A+ELR ++++
Sbjct: 47 SNAQPTTHQSTGSLGNKSAGMDDELFRKQQDLERRAQELRMREEELDR 94
>Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 223
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 223
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 223
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 223
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 223
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 223
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 738 PPXXPXPPXXXXXXPLXXXXXXPSPXPXXXXXXTXGPPPP 857
PP PP P+ P P P T GPPPP
Sbjct: 707 PPITGGPPPPPGLPPI-TGGPPPPPPPGGLPPITGGPPPP 745
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +3
Query: 750 PXPPXXXXXXPLXXXXXXPSPXPXXXXXXTXGPPPP 857
P PP P P P P + GPPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 738 PPXXPXPPXXXXXXPLXXXXXXPSPXPXXXXXXTXGPPPP 857
PP PP P+ P P P T GPPPP
Sbjct: 707 PPITGGPPPPPGLPPI-TGGPPPPPPPGGLPPITGGPPPP 745
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +3
Query: 750 PXPPXXXXXXPLXXXXXXPSPXPXXXXXXTXGPPPP 857
P PP P P P P + GPPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
>AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kinase
2 protein.
Length = 796
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 223
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 738 PPXXPXPPXXXXXXPLXXXXXXPSPXPXXXXXXTXGPPPP 857
PP PP P+ P P P T GPPPP
Sbjct: 290 PPITGGPPPPPGLPPI-TGGPPPPPPPGGLPPITGGPPPP 328
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +3
Query: 750 PXPPXXXXXXPLXXXXXXPSPXPXXXXXXTXGPPPP 857
P PP P P P P + GPPPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 3/43 (6%)
Frame = +3
Query: 738 PPXXPXPPXXXXXXPLXXXXXXPSPXPXXXXXXTXG---PPPP 857
PP P PP P+ P P P G PPPP
Sbjct: 610 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP 652
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 3/43 (6%)
Frame = +3
Query: 738 PPXXPXPPXXXXXXPLXXXXXXPSPXPXXXXXXTXG---PPPP 857
PP P PP P+ P P P G PPPP
Sbjct: 436 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP 478
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 143 HRSGPRSDGATRRSRLLQGHRTPHQGSSIRL 235
HR GP GAT R+L+ R P++ I L
Sbjct: 92 HRRGPADQGATYDERILEIRRDPNRTCHIAL 122
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +1
Query: 370 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVXNTVQESXKLX 540
D + EA E++R+N E ELR+ + D+ + +AL R KL+ + E ++
Sbjct: 1699 DELAQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIA 1758
Query: 541 XKVSSNVXE 567
++ + V +
Sbjct: 1759 NELKNAVEQ 1767
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +3
Query: 741 PXXPXPPXXXXXXPLXXXXXXPSPXPXXXXXXTXGPPPP 857
P P PP P+ P P P T P PP
Sbjct: 501 PNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPP 539
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +1
Query: 370 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVXNTVQESXKLX 540
D + EA E++R+N E ELR+ + D+ + +AL R KL+ + E ++
Sbjct: 1699 DELAQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIA 1758
Query: 541 XKVSSNVXE 567
++ + V +
Sbjct: 1759 NELKNAVEQ 1767
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,427,685
Number of Sequences: 27780
Number of extensions: 209818
Number of successful extensions: 862
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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