Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_K24
(946 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 0.11
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 0.11
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.22
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 0.24
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 0.24
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 27 0.77
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 0.91
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 31 0.91
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 31 0.91
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 0.91
U28738-8|AAA68313.1| 126|Caenorhabditis elegans Small nuclear r... 31 1.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 31 1.6
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 2.1
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 2.1
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.8
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 30 2.8
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 25 4.1
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 4.8
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 4.8
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 4.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 25 5.3
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 24 5.4
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr... 25 6.8
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 24 7.0
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 28 8.5
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 30.3 bits (65), Expect(2) = 0.11
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 763 PPXPLPXPPXPXGTAPXPSPP 825
PP P P PP G P P PP
Sbjct: 794 PPPPPPLPPISSGAPPPPPPP 814
Score = 23.0 bits (47), Expect(2) = 0.11
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 919 PPPPXXPPP 945
PPPP PPP
Sbjct: 808 PPPPPPPPP 816
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 30.3 bits (65), Expect(2) = 0.11
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 763 PPXPLPXPPXPXGTAPXPSPP 825
PP P P PP G P P PP
Sbjct: 794 PPPPPPLPPISSGAPPPPPPP 814
Score = 23.0 bits (47), Expect(2) = 0.11
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 919 PPPPXXPPP 945
PPPP PPP
Sbjct: 808 PPPPPPPPP 816
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 33.5 bits (73), Expect = 0.22
Identities = 17/60 (28%), Positives = 19/60 (31%)
Frame = +1
Query: 751 PXXXPPXPLPXPPXPXGTAPXPSPPXXPXXXXXXXXXXXXXXXXXXXXXXXVLTPXPPPP 930
P PP P P PP T P PP P ++ P PPPP
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPP 1395
Score = 31.5 bits (68), Expect = 0.91
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +1
Query: 763 PPXPLPXPPXPXGTAPXPSPPXXPXXXXXXXXXXXXXXXXXXXXXXXVLTPXPPPPXXP 939
PP P P PP P P PP P + PPPP P
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLP 1397
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.1 bits (62), Expect(2) = 0.24
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +1
Query: 751 PXXXPPXPLPXPPXPXGTAPXPS--PPXXP 834
P PP P P PP G AP S PP P
Sbjct: 605 PHAVPPPPPPPPPQSFGMAPISSAAPPPPP 634
Score = 23.0 bits (47), Expect(2) = 0.24
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 919 PPPPXXPPP 945
PPPP PPP
Sbjct: 630 PPPPPPPPP 638
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.1 bits (62), Expect(2) = 0.24
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +1
Query: 751 PXXXPPXPLPXPPXPXGTAPXPS--PPXXP 834
P PP P P PP G AP S PP P
Sbjct: 431 PHAVPPPPPPPPPQSFGMAPISSAAPPPPP 460
Score = 23.0 bits (47), Expect(2) = 0.24
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 919 PPPPXXPPP 945
PPPP PPP
Sbjct: 456 PPPPPPPPP 464
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 27.5 bits (58), Expect(2) = 0.77
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 766 PXPLPXPPXPXGTAPXPSPPXXP 834
P P PP G AP P PP P
Sbjct: 37 PACAPPPPPMCGCAPPPPPPPPP 59
Score = 23.0 bits (47), Expect(2) = 0.77
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 919 PPPPXXPPP 945
PPPP PPP
Sbjct: 52 PPPPPPPPP 60
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.5 bits (68), Expect = 0.91
Identities = 20/66 (30%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Frame = +1
Query: 751 PXXXPPXPLPXP-PXPXGTAPXPSPPXXPXXXXXXXXXXXXXXXXXXXXXXXVLTPXPPP 927
P P P P P P P P P+PP P P PPP
Sbjct: 88 PQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQP---------PPPPPP 138
Query: 928 PXXPPP 945
P PPP
Sbjct: 139 PHYPPP 144
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 764 PPPPXRXXPLPAVPXPXPP 820
PPPP P AVP P PP
Sbjct: 50 PPPPPAPYPQQAVPAPAPP 68
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 31.5 bits (68), Expect = 0.91
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 751 PXXXPPXPLPXPPXPXGTAPXPS 819
P PP P P PP P +AP PS
Sbjct: 3 PPPPPPPPPPPPPPPAASAPPPS 25
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 31.5 bits (68), Expect = 0.91
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 751 PXXXPPXPLPXPPXPXGTAPXPS 819
P PP P P PP P +AP PS
Sbjct: 3 PPPPPPPPPPPPPPPAASAPPPS 25
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.5 bits (68), Expect = 0.91
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +1
Query: 763 PPXPLPXPPXPXGTAPXPSPPXXPXXXXXXXXXXXXXXXXXXXXXXXVLTPXPPPPXXPP 942
P P P PP P P PSP P + P PPPP PP
Sbjct: 467 PTTPKPAPPPP-SRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSS---VPPPPPPPPPPP 522
Query: 943 P 945
P
Sbjct: 523 P 523
>U28738-8|AAA68313.1| 126|Caenorhabditis elegans Small nuclear
ribonucleoproteinprotein 3 protein.
Length = 126
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -3
Query: 833 GXXGGEGXGAVPXGXGGXGRGXGGXXXGXXR 741
G G G G + G GG GRG GG G R
Sbjct: 95 GASRGRGRGGMRGGRGGRGRGRGGPRGGGPR 125
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = -3
Query: 944 GGGXXGGGGXGVRTXXXXXXXXXXXXXXXXXXXXXXXGXXGGEGXGAVPXGXGGXGRGXG 765
GGG GGGG G GG G G G GG G G G
Sbjct: 23 GGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGG 82
Query: 764 GXXXG 750
G G
Sbjct: 83 GGCGG 87
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/65 (32%), Positives = 21/65 (32%)
Frame = -3
Query: 944 GGGXXGGGGXGVRTXXXXXXXXXXXXXXXXXXXXXXXGXXGGEGXGAVPXGXGGXGRGXG 765
GGG GGGG G G GG G G G GG G G G
Sbjct: 88 GGGGCGGGGGGC-GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGG 146
Query: 764 GXXXG 750
G G
Sbjct: 147 GGCGG 151
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 751 PXXXPPXPLPXPPXPXGTAPXPSPPXXP 834
P PP PLP P P P P+P P
Sbjct: 91 PCATPPCPLPYIPEPVAPVPAPAPVYEP 118
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 763 PPXPLPXPPXPXGTAPXPSPPXXP 834
PP PLP PP P PSP P
Sbjct: 85 PPAPLPPPPPPASPCCGPSPVPAP 108
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/65 (32%), Positives = 21/65 (32%)
Frame = -3
Query: 944 GGGXXGGGGXGVRTXXXXXXXXXXXXXXXXXXXXXXXGXXGGEGXGAVPXGXGGXGRGXG 765
GGG GGGG G G GG G G G GG GRG
Sbjct: 92 GGGGRGGGGRG--DWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPP 149
Query: 764 GXXXG 750
G G
Sbjct: 150 GSNGG 154
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 739 TRXXPXXXPPXPLPXPPXPXGTAPXPSPPXXP 834
T P PP P P PP P P P PP P
Sbjct: 346 TEIPPIISPPAPPPPPPPP----PPPPPPQTP 373
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = +1
Query: 751 PXXXPPXPLPXPPXPXGTAPXPSPPXXPXXXXXXXXXXXXXXXXXXXXXXXVLTPXPPPP 930
P P P P PP P G P P PP P + P PPP
Sbjct: 267 PPSVTPMPPPMPPTP-GMTPRPPPP--PSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 323
Query: 931 XXPPP 945
PP
Sbjct: 324 RFGPP 328
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 740 PVXXXXXXPPPPXRXXPLPAVPXPXPPXP 826
P+ PPPP P+ P P PP P
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Frame = +1
Query: 751 PXXXPPX---PLPXPPXPXGTAPXPSPP 825
P PP P P PP P G P P PP
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/64 (28%), Positives = 18/64 (28%), Gaps = 3/64 (4%)
Frame = +1
Query: 763 PPXPLPXPPXPXGTAPXPSPPXXPXXXXXXXXXXXXXXXXXXXXXXXVLTPXP---PPPX 933
PP P PP G P P P P P P PPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 934 XPPP 945
PPP
Sbjct: 773 PPPP 776
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 778 PXPPXPXGTAPXPSPPXXP 834
P PP P G P P PP P
Sbjct: 759 PPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 740 PVXXXXXXPPPPXRXXPLPAVPXPXPPXP 826
P+ PPPP P+ P P PP P
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Frame = +1
Query: 751 PXXXPPX---PLPXPPXPXGTAPXPSPP 825
P PP P P PP P G P P PP
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/64 (28%), Positives = 18/64 (28%), Gaps = 3/64 (4%)
Frame = +1
Query: 763 PPXPLPXPPXPXGTAPXPSPPXXPXXXXXXXXXXXXXXXXXXXXXXXVLTPXP---PPPX 933
PP P PP G P P P P P P PPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 934 XPPP 945
PPP
Sbjct: 773 PPPP 776
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 778 PXPPXPXGTAPXPSPPXXP 834
P PP P G P P PP P
Sbjct: 759 PPPPPPPGGCPPPPPPPPP 777
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = +1
Query: 751 PXXXPPXPLPXPPXPXGTAPXPSPPXXPXXXXXXXXXXXXXXXXXXXXXXXVLTPXPPPP 930
P P P P PP P G P P PP P + P PPP
Sbjct: 277 PPSVTPMPPPMPPTP-GMTPRPPPP--PSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 333
Query: 931 XXPPP 945
PP
Sbjct: 334 RFGPP 338
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 740 PVXXXXXXPPPPXRXXPLPAVPXPXPPXP 826
P+ PPPP P+ P P PP P
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Frame = +1
Query: 751 PXXXPPX---PLPXPPXPXGTAPXPSPP 825
P PP P P PP P G P P PP
Sbjct: 331 PGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/64 (28%), Positives = 18/64 (28%), Gaps = 3/64 (4%)
Frame = +1
Query: 763 PPXPLPXPPXPXGTAPXPSPPXXPXXXXXXXXXXXXXXXXXXXXXXXVLTPXP---PPPX 933
PP P PP G P P P P P P PPP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 934 XPPP 945
PPP
Sbjct: 356 PPPP 359
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 778 PXPPXPXGTAPXPSPPXXP 834
P PP P G P P PP P
Sbjct: 342 PPPPPPPGGCPPPPPPPPP 360
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 764 PPPPXRXXPLPAVPXPXPPXP 826
PP P P+ AVP P PP P
Sbjct: 71 PPQPYAQSPIAAVPPPPPPPP 91
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 24.6 bits (51), Expect(2) = 4.1
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Frame = +1
Query: 763 PPXPLPXPP--XPXGTAPXPSPPXXP 834
PP P P PP AP P PP P
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPPP 92
Score = 23.0 bits (47), Expect(2) = 4.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 919 PPPPXXPPP 945
PPPP PPP
Sbjct: 85 PPPPPPPPP 93
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 766 PXPLPXPPXPXGTAPXPSPPXXP 834
P P P PP G P P PP P
Sbjct: 234 PPPPPLPPVGAGAPPPPPPPPPP 256
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 740 PVXXXXXXPPPPXRXXPLPAVPXPXPPXPXA 832
PV PPPP A P P PP P A
Sbjct: 227 PVNAHGAPPPPPLPPVGAGAPPPPPPPPPPA 257
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 766 PXPLPXPPXPXGTAPXPSPPXXP 834
P P P PP G P P PP P
Sbjct: 220 PPPPPLPPVGAGAPPPPPPPPPP 242
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 740 PVXXXXXXPPPPXRXXPLPAVPXPXPPXPXA 832
PV PPPP A P P PP P A
Sbjct: 213 PVNAHGAPPPPPLPPVGAGAPPPPPPPPPPA 243
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 766 PXPLPXPPXPXGTAPXPSPPXXP 834
P P P PP G P P PP P
Sbjct: 220 PPPPPLPPVGAGAPPPPPPPPPP 242
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 740 PVXXXXXXPPPPXRXXPLPAVPXPXPPXPXA 832
PV PPPP A P P PP P A
Sbjct: 213 PVNAHGAPPPPPLPPVGAGAPPPPPPPPPPA 243
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 763 PPXPLPXPPXPXGTAPXPSPP 825
PP P P PP G P P PP
Sbjct: 576 PPPPPPPPPMLGGPPPPPPPP 596
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 25.0 bits (52), Expect(2) = 5.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 763 PPXPLPXPPXPXGTAPXPSPP 825
PP P P G++P P PP
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPP 143
Score = 22.2 bits (45), Expect(2) = 5.3
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 913 PXPPPPXXPPP 945
P PPP PPP
Sbjct: 147 PRTPPPRSPPP 157
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 24.2 bits (50), Expect(2) = 5.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 910 TPXPPPPXXPPP 945
TP PPP PPP
Sbjct: 137 TPAAPPPPPPPP 148
Score = 23.8 bits (49), Expect(2) = 7.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 763 PPXPLPXPPXPXGTAPXPSPPXXP 834
PP PP P AP P PP P
Sbjct: 128 PPRTCCPPPTP--AAPPPPPPPPP 149
Score = 23.0 bits (47), Expect(2) = 5.4
Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Frame = +1
Query: 766 PXPLPXPPXPXGT-APXPSPPXXP 834
P +P PP P T P P+P P
Sbjct: 119 PGGVPAPPNPPRTCCPPPTPAAPP 142
Score = 23.0 bits (47), Expect(2) = 7.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 919 PPPPXXPPP 945
PPPP PPP
Sbjct: 142 PPPPPPPPP 150
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = -3
Query: 944 GGGXXGGGGXGVRTXXXXXXXXXXXXXXXXXXXXXXXGXXGGEGXGAVPXGXGGXGRGXG 765
GGG GGGG G G GG G G G GG G G
Sbjct: 86 GGGGCGGGGGGC-GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSS 144
Query: 764 GXXXG 750
G G
Sbjct: 145 GGCGG 149
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = -3
Query: 944 GGGXXGGGGXGVRTXXXXXXXXXXXXXXXXXXXXXXXGXXGGEGXGAVPXGXGGXGRGXG 765
GGG GGGG G G GG G P G GG G G
Sbjct: 159 GGGGCGGGGGG-GCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGS 217
Query: 764 GXXXG 750
G
Sbjct: 218 SGGGG 222
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = -3
Query: 944 GGGXXGGGGXGVRTXXXXXXXXXXXXXXXXXXXXXXXGXXGGEGXGAVPXGXGGXGRGXG 765
GGG GGGG G G GG G G G GG G G
Sbjct: 86 GGGGCGGGGGGC-GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSS 144
Query: 764 GXXXG 750
G G
Sbjct: 145 GGCGG 149
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = -3
Query: 944 GGGXXGGGGXGVRTXXXXXXXXXXXXXXXXXXXXXXXGXXGGEGXGAVPXGXGGXGRGXG 765
GGG GGGG G G GG G P G GG G G
Sbjct: 159 GGGGCGGGGGG-GCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGS 217
Query: 764 GXXXG 750
G
Sbjct: 218 SGGGG 222
>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical protein
F43C1.1 protein.
Length = 1036
Score = 25.0 bits (52), Expect(2) = 6.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 751 PXXXPPXPLPXPPXPXGTAPXPSPPXXP 834
P P P+P PP P PSPP P
Sbjct: 939 PEYHPSPPVP-PPIPAIRHRTPSPPPPP 965
Score = 21.8 bits (44), Expect(2) = 6.8
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 910 TPXPPPPXXP 939
TP PPPP P
Sbjct: 958 TPSPPPPPLP 967
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 23.8 bits (49), Expect(2) = 7.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 910 TPXPPPPXXPPP 945
TP PPPP P P
Sbjct: 571 TPPPPPPAKPRP 582
Score = 23.0 bits (47), Expect(2) = 7.0
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = +1
Query: 766 PXPLPXPPXPXGTAPXPSPPXXP 834
P P P P P P P P P
Sbjct: 548 PPPPPREPTPREPTPEPEPVREP 570
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = -3
Query: 944 GGGXXGGGGXGVRTXXXXXXXXXXXXXXXXXXXXXXXGXXGGEGXGAVPXGXGGXGRGXG 765
GGG GGGG G G G G G G GG +G G
Sbjct: 57 GGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGNQGGG 116
Query: 764 G 762
G
Sbjct: 117 G 117
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,991,783
Number of Sequences: 27780
Number of extensions: 306505
Number of successful extensions: 3059
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2398
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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