Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_K23
         (905 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L16621-10|AAA28227.1|  507|Caenorhabditis elegans Temporarily as...   108   6e-24
L16621-9|AAL11487.1|  568|Caenorhabditis elegans Temporarily ass...   108   6e-24
L14324-7|AAA28181.2|  565|Caenorhabditis elegans Prolyl carboxy ...    90   2e-18
U88309-1|AAB42331.3|  395|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z93393-17|CAB07693.2|  751|Caenorhabditis elegans Hypothetical p...    29   4.6  
Z82057-2|CAD89759.1|  561|Caenorhabditis elegans Hypothetical pr...    28   8.0  
AL110500-7|CAB54490.1|  489|Caenorhabditis elegans Hypothetical ...    28   8.0  

>L16621-10|AAA28227.1|  507|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 282, isoform a protein.
          Length = 507

 Score =  108 bits (259), Expect = 6e-24
 Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 15/219 (6%)
 Frame = +1

Query: 31  KTYKNHWHLIRSYSSSVNGSEYLHKTLNLCGAS---NATDINSLIEYLESAYVTLAMVNY 201
           K  +  W  +   + S +G +YL+    L   S   N  DI  L +Y+  +   +AMVNY
Sbjct: 228 KAIEKGWIALDELAKSDSGRQYLNVLYKLDPKSKLENKDDIGFLKQYIRESMEAMAMVNY 287

Query: 202 PFASSFLTPLPAQPVAVVCQYLNQ-NLANESLLEGIAKAIDVYANY-GKKTKQCVDYKEG 375
           P+ +SFL+ LPA PV   C+  +Q     E   E + K +++Y NY G K+  C +  + 
Sbjct: 288 PYPTSFLSSLPAWPVKEACKSASQPGKTQEESAEQLYKIVNLYYNYTGDKSTHCANAAKC 347

Query: 376 DN-YQNL-DAGGWDFQACTEMVMPVCXTG-QNDMF-EASPWNFTKYSEDCYKKY-NVYPR 540
           D+ Y +L D  GW FQ CTEMVMP+C +G  ND F +  P+   KY+E C + + +++  
Sbjct: 348 DSAYGSLGDPLGWPFQTCTEMVMPLCGSGYPNDFFWKDCPFTSEKYAEFCMQTFSSIHYN 407

Query: 541 ENXXR-----LQYGGDLLXACFXYCLXLWVVXPWTXGGF 642
           +   R     L +G   L +          + PW+ GG+
Sbjct: 408 KTLLRPLAGGLAFGATSLPSASNIVFSNGYLDPWSGGGY 446


>L16621-9|AAL11487.1|  568|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 282, isoform b protein.
          Length = 568

 Score =  108 bits (259), Expect = 6e-24
 Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 15/219 (6%)
 Frame = +1

Query: 31  KTYKNHWHLIRSYSSSVNGSEYLHKTLNLCGAS---NATDINSLIEYLESAYVTLAMVNY 201
           K  +  W  +   + S +G +YL+    L   S   N  DI  L +Y+  +   +AMVNY
Sbjct: 289 KAIEKGWIALDELAKSDSGRQYLNVLYKLDPKSKLENKDDIGFLKQYIRESMEAMAMVNY 348

Query: 202 PFASSFLTPLPAQPVAVVCQYLNQ-NLANESLLEGIAKAIDVYANY-GKKTKQCVDYKEG 375
           P+ +SFL+ LPA PV   C+  +Q     E   E + K +++Y NY G K+  C +  + 
Sbjct: 349 PYPTSFLSSLPAWPVKEACKSASQPGKTQEESAEQLYKIVNLYYNYTGDKSTHCANAAKC 408

Query: 376 DN-YQNL-DAGGWDFQACTEMVMPVCXTG-QNDMF-EASPWNFTKYSEDCYKKY-NVYPR 540
           D+ Y +L D  GW FQ CTEMVMP+C +G  ND F +  P+   KY+E C + + +++  
Sbjct: 409 DSAYGSLGDPLGWPFQTCTEMVMPLCGSGYPNDFFWKDCPFTSEKYAEFCMQTFSSIHYN 468

Query: 541 ENXXR-----LQYGGDLLXACFXYCLXLWVVXPWTXGGF 642
           +   R     L +G   L +          + PW+ GG+
Sbjct: 469 KTLLRPLAGGLAFGATSLPSASNIVFSNGYLDPWSGGGY 507


>L14324-7|AAA28181.2|  565|Caenorhabditis elegans Prolyl carboxy
           peptidase like protein1 protein.
          Length = 565

 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 65/223 (29%), Positives = 106/223 (47%), Gaps = 23/223 (10%)
 Frame = +1

Query: 43  NHWHLIRSYSSSVNGSEYLHKTLNL-----CGASNATDINSLIEYLESAYVTLAMVNYPF 207
           N W+   + SS+  G ++L+              N TD  +L  YL  A   +AMV+YP+
Sbjct: 237 NAWNATLNLSSTDAGRQWLNNNTVFKLDPRTKIRNQTDGWNLNAYLREAIEYMAMVDYPY 296

Query: 208 ASSFLTPLPAQPVAVVCQYLNQN---LANESLLEGIAKAIDVYANYGKKTK--QCVDYK- 369
            + FL PLPA PV V C Y+N N    +++ L++ +A A ++Y NY +      C+D+  
Sbjct: 297 PTGFLEPLPAWPVTVACGYMNANGTSFSDKDLVKAVANAANIYYNYNRDPNFTYCIDFSI 356

Query: 370 ---EGDNYQNLDAGGWDFQACTEMVMPVCXT-GQNDMF--EASPWNFTKYSEDC---YKK 522
              +G      D  GW +Q C+E++M +C + G ND+F  E     +    + C   +K 
Sbjct: 357 CGDQGTGGLGGDELGWPWQECSEIIMAMCASGGSNDVFWNECGKDIYQTLQQGCVSIFKS 416

Query: 523 YNVYPRE---NXXRLQYGGDLLXACFXYCLXLWVVXPWTXGGF 642
               P+    +  +  YG DL  +     L    + PW+ GG+
Sbjct: 417 MGWTPKNWNIDAVKTLYGYDLSGSS-NLILTQGHLDPWSGGGY 458


>U88309-1|AAB42331.3|  395|Caenorhabditis elegans Hypothetical
           protein T23B3.4 protein.
          Length = 395

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = -3

Query: 507 FRIFGKVPRRRFEHIILPRRTNRHYHLCARLKVPAACVQILVI-----VPFFIIYTLLGF 343
           F  F   PR  F+  +L R TN+   L A+ KV    + ++++     VP ++ + LL  
Sbjct: 247 FSSFFSTPRGSFDVTMLLRSTNQEKILIAKKKVTRMLITLVIVFAFCWVPSYLYWLLLRM 306

Query: 342 LPIISVNVYSFG 307
             + + ++++ G
Sbjct: 307 AELAATDLWNPG 318


>Z93393-17|CAB07693.2|  751|Caenorhabditis elegans Hypothetical
           protein Y48E1B.7 protein.
          Length = 751

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 496 KYSEDCYKKYNVYPRENXXRLQYGG 570
           +Y+ D Y++Y VYP     + Q+GG
Sbjct: 147 RYAVDDYREYTVYPTSGGPKQQHGG 171


>Z82057-2|CAD89759.1|  561|Caenorhabditis elegans Hypothetical
           protein T26H8.4 protein.
          Length = 561

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 525 VFLVAIFRIFGKVPRRRFEHIIL 457
           +FL+A  ++FG+ P R+F  I+L
Sbjct: 160 IFLIAAVKVFGRKPHRKFILIVL 182


>AL110500-7|CAB54490.1|  489|Caenorhabditis elegans Hypothetical
           protein Y87G2A.7 protein.
          Length = 489

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 12/51 (23%), Positives = 26/51 (50%)
 Frame = +1

Query: 55  LIRSYSSSVNGSEYLHKTLNLCGASNATDINSLIEYLESAYVTLAMVNYPF 207
           LIR + ++V   +Y  + L+ CG S   D+ +  + ++  ++    +  PF
Sbjct: 280 LIRGHKTTVYLPKYYQEFLSDCGVSKVDDLVAFQKLIDLGFIKFLEITNPF 330


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,475,967
Number of Sequences: 27780
Number of extensions: 348744
Number of successful extensions: 888
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)