Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_K19
         (878 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   0.094
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   7.0  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect(2) = 0.094
 Identities = 14/41 (34%), Positives = 15/41 (36%)
 Frame = +3

Query: 729 PXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPP 851
           P   G  G  +   P   P PPP    G     PP   PPP
Sbjct: 513 PHGAGYDGRDLTGGPLGPPPPPPPG--GAVLNIPPQFLPPP 551



 Score = 23.8 bits (49), Expect(2) = 0.094
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +3

Query: 828 PPXPXPPPTXPPXXP 872
           P  P PPP  PP  P
Sbjct: 583 PAPPPPPPMGPPPSP 597



 Score = 23.4 bits (48), Expect = 9.3
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3

Query: 825 APPXPXPPPTXPPXXPRP 878
           A P P PPP  PP  P P
Sbjct: 579 AQPPPAPPP-PPPMGPPP 595


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
 Frame = +3

Query: 783 PXPPPRAXRGFXFXAPPXPXPPPT--XPPXXPRP 878
           P P   A        PP P PPP+   P   PRP
Sbjct: 769 PSPSRSAFADGIGSPPPPPPPPPSSLSPGGVPRP 802


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +3

Query: 789 PPPRAXRGFXFXAPPXPXPPPTXPP 863
           PP  A + F    PP P   PT  P
Sbjct: 427 PPLHALKDFINKEPPRPGQSPTQSP 451


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 345,866
Number of Sequences: 2352
Number of extensions: 4272
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)