Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_K19
(878 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.12
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.12
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.12
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.12
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.12
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 34 0.15
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 32 0.47
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.62
Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical pr... 31 0.82
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 0.82
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 31 1.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.1
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 31 1.1
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 31 1.1
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 31 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.4
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 31 1.4
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 31 1.4
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 31 1.4
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 31 1.4
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 1.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 30 1.9
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 1.9
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 30 2.5
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.5
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 3.3
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 3.3
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.4
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 5.8
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 5.8
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 29 5.8
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 29 5.8
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 7.7
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +3
Query: 705 PSGXPLXFPXPRGXVGERVXPXPKXKPXP-PPRAXRGFXFXAPPXPXPPPTXPPXXP 872
P+ PL P + P +P P A G+ PP P PPP+ P P
Sbjct: 219 PANTPLAMPGVHAAIAAHATGRPGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPP 275
Score = 31.9 bits (69), Expect = 0.62
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 765 PXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXP 872
P P P PPP G PP P PPP P P
Sbjct: 279 PTPGMTPRPPPPPSSGMW---PPPPPPPPGRTPGPP 311
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 765 PXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P P P PPP PP P PP P P
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPP 303
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +3
Query: 705 PSGXPLXFPXPRGXVGERVXPXPKXKPXP-PPRAXRGFXFXAPPXPXPPPTXPPXXP 872
P+ PL P + P +P P A G+ PP P PPP+ P P
Sbjct: 229 PANTPLAMPGVHAAIAAHATGRPGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPP 285
Score = 31.9 bits (69), Expect = 0.62
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 765 PXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXP 872
P P P PPP G PP P PPP P P
Sbjct: 289 PTPGMTPRPPPPPSSGMW---PPPPPPPPGRTPGPP 321
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 765 PXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P P P PPP PP P PP P P
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPP 313
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +3
Query: 705 PSGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P G P P G P P PPPR R +PP PP PP P
Sbjct: 303 PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 360
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 765 PXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P P PPPRA +PP P PP PP P
Sbjct: 282 PPPAGGSPPPPRA------GSPPPPPPPRGSPPTGSLP 313
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +3
Query: 705 PSGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P G P P G P P PPPR R +PP PP PP P
Sbjct: 324 PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 381
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 765 PXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P P PPPRA +PP P PP PP P
Sbjct: 303 PPPAGGSPPPPRA------GSPPPPPPPRGSPPTGSLP 334
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +3
Query: 705 PSGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P G P P G P P PPPR R +PP PP PP P
Sbjct: 309 PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 366
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 765 PXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P P PPPRA +PP P PP PP P
Sbjct: 288 PPPAGGSPPPPRA------GSPPPPPPPRGSPPTGSLP 319
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 705 PSGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAP-PXPXPPPTXPPXXPRP 878
P P+ FP P + P PK KP P P+ F P P P P P P P+P
Sbjct: 166 PFPNPMPFPKPMPKPKPKPKPMPKHKPKPFPKP---MLFPKPMPIPKPMP-FPKPMPKP 220
Score = 31.5 bits (68), Expect = 0.82
Identities = 17/57 (29%), Positives = 21/57 (36%)
Frame = +3
Query: 705 PSGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPR 875
P P P P+ + P PK KP P P+ P P P P P P+
Sbjct: 232 PMLFPKPMPIPKPMPFPKPMPKPKPKPKPMPKPKPKLKLKPKPMPFPKP-KPKLKPK 287
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +3
Query: 705 PSGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P P+ FP P + P PK KP P P+ F P P P P+P
Sbjct: 30 PFPSPMPFPKPMPKPKPKPKPMPKHKPKPFPKPML-FPKPMPKHKPKPFPKPMLFPKP 86
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = +3
Query: 705 PSGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAP-PXPXPPP-TXPPXXPRP 878
P P P P + P PK KP P P+ F P P P P P P P+P
Sbjct: 94 PKSKPKSEPFPNPMPFPKPKPMPKHKPKPFPKP---MLFPKPMPIPKPMPFPKPMLFPKP 150
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +3
Query: 717 PLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAP-PXPXPPPTXPPXXPRP 878
P+ P P P PK KP P P+ F P P P P P P P+P
Sbjct: 204 PMPIPKPMPFPKPMPKPMPKHKPKPFPKP---MLFPKPMPIPKPMP-FPKPMPKP 254
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +3
Query: 705 PSGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P P P P+ + P PK KP P P+ P P P P P P+P
Sbjct: 183 PKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKP-KPNPNPKP 239
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = +3
Query: 705 PSGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P+ P P P+ + P PK KP P P+ P P P P P P+P
Sbjct: 161 PNPKPEPKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKP-EPKPKPKP 217
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/61 (29%), Positives = 21/61 (34%), Gaps = 3/61 (4%)
Frame = +3
Query: 705 PSGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXP---PPTXPPXXPR 875
P P P P+ + P PK KP P P + P P P P P P
Sbjct: 221 PKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKPE 280
Query: 876 P 878
P
Sbjct: 281 P 281
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/58 (29%), Positives = 20/58 (34%)
Frame = +3
Query: 705 PSGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P P P P+ P PK KP P P+ P P P P P+P
Sbjct: 219 PKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKP-KPKP 275
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.9 bits (69), Expect = 0.62
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 774 KXKPXPPPRAXRGFXFXAPPXPXPPPTXPP 863
K P PPP PP P PPP PP
Sbjct: 494 KSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/72 (29%), Positives = 25/72 (34%), Gaps = 7/72 (9%)
Frame = +3
Query: 669 PLXPXQKXX*KXPSGXP-LXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAP----- 830
P P + PS P + FP G P KP PPP + +P
Sbjct: 433 PKTPTRVAPPPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEV 492
Query: 831 -PXPXPPPTXPP 863
P PPP PP
Sbjct: 493 SKSPPPPPPLPP 504
>Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical
protein ZK265.2 protein.
Length = 381
Score = 31.5 bits (68), Expect = 0.82
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 789 PPPRAXRGFXFXAPPXPXPPPTXPPXXPR 875
P P A +G+ AP P PPP P P+
Sbjct: 319 PAPAAPKGYDAPAPTAPHPPPPAPVAPPK 347
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 31.5 bits (68), Expect = 0.82
Identities = 20/60 (33%), Positives = 22/60 (36%)
Frame = +3
Query: 699 KXPSGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
+ P P+ P P V P P PPP PP P P P PP PRP
Sbjct: 38 RMPCAAPMPMPMPM-PVCPPPPPCPAQFCPPPPICP-----PPPPPPMPCPPPPPPMPRP 91
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +3
Query: 729 PXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPP 863
P PRG + P P+ + P P+ RG + P P P P
Sbjct: 144 PSPRGYENQPQPPQPQQQQYPQPQPQRGGCTYSQPQPQPQQQPQP 188
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +3
Query: 729 PXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPP 863
P PRG + P P+ + P P+ RG + P P P P
Sbjct: 144 PSPRGYENQPQPPQPQQQQYPQPQPQRGGCTYSQPQPQPQQQPQP 188
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +3
Query: 729 PXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPP 863
P PRG + P P+ + P P+ RG + P P P P
Sbjct: 144 PSPRGYENQPQPPQPQQQQYPQPQPQRGGCTYSQPQPQPQQQPQP 188
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/57 (33%), Positives = 21/57 (36%)
Frame = +3
Query: 708 SGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
+G P P P G + P P PPP PP P PPP P P P
Sbjct: 723 TGGPPPPPPPGG-----LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 783 PXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P PPP PP P PP PP P P
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 765 PXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXP 872
P P P PPP G PP P PP P P
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/57 (33%), Positives = 21/57 (36%)
Frame = +3
Query: 708 SGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
+G P P P G + P P PPP PP P PPP P P P
Sbjct: 723 TGGPPPPPPPGG-----LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 783 PXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P PPP PP P PP PP P P
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 765 PXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXP 872
P P P PPP G PP P PP P P
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +3
Query: 741 GXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
G G P+ P PPR F PP P PP P PRP
Sbjct: 123 GPPGHHFQGPPQHFPPGPPRPH----FPGPPGPHRPPEHYPGPPRP 164
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 705 PSGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXP 860
P G P +P + + P P PPP+ RG+ + PP P P P
Sbjct: 699 PYGPPGGYPPQQQRPPYQAQPYPGP---PPPQQQRGYGYPPPPQPGHPYQQP 747
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 705 PSGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXP 860
P G P +P + + P P PPP+ RG+ + PP P P P
Sbjct: 699 PYGPPGGYPPQQQRPPYQAQPYPGP---PPPQQQRGYGYPPPPQPGHPYQQP 747
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/57 (33%), Positives = 21/57 (36%)
Frame = +3
Query: 708 SGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
+G P P P G + P P PPP PP P PPP P P P
Sbjct: 306 TGGPPPPPPPGG-----LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 783 PXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P PPP PP P PP PP P P
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 765 PXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXP 872
P P P PPP G PP P PP P P
Sbjct: 346 PPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +3
Query: 783 PXPPPRAXRGFXFXAPPXPXPPPT--XPPXXPRP 878
P PPP + PP P PPP PP P P
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPP 595
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 771 PKXKPXPPPRAXRGFXFXAPPXPXPPP 851
P P PPP APP P PPP
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPP 656
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +3
Query: 717 PLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPP 863
PL G R P P PPP++ G + P PPP PP
Sbjct: 591 PLPQAPNYGTPENRPHAVPPPPPPPPPQSF-GMAPISSAAPPPPPPPPP 638
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 771 PKXKPXPPPRAXRGFXFXAPPXPXPPP 851
P P PPP APP P PPP
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPP 482
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +3
Query: 717 PLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPP 863
PL G R P P PPP++ G + P PPP PP
Sbjct: 417 PLPQAPNYGTPENRPHAVPPPPPPPPPQSF-GMAPISSAAPPPPPPPPP 464
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 5/43 (11%)
Frame = +3
Query: 765 PXPKXKPXPPPRAXRGFXFXAPPXPXP-----PPTXPPXXPRP 878
P P +P PPP P P P PP PP PRP
Sbjct: 540 PSPVREPTPPPPPREPTPREPTPEPEPVREPTPPPPPPAKPRP 582
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +3
Query: 708 SGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPP 851
S P P P +G P PPP G PP P PPP
Sbjct: 209 SNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +3
Query: 708 SGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPP 851
S P P P +G P PPP G PP P PPP
Sbjct: 195 SNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +3
Query: 708 SGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPP 851
S P P P +G P PPP G PP P PPP
Sbjct: 195 SNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +3
Query: 729 PXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPT-XPPXXPRP 878
P G V P P P PP G PP P PPT PP P P
Sbjct: 226 PPSPGPVDPSDEPSPSDPPGPP--GPPGPPTRRPPGPPGPPTRRPPGPPGP 274
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 783 PXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P PPPR R +PP PP T P RP
Sbjct: 140 PPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRP 171
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Frame = +3
Query: 726 FPXPRGXVGERVXPXPKX-----KPXPPPRAXRGFXFXAPPXPXPPP----TXPPXXPRP 878
+P P G G +V P P+ P PPP + + P P PPP T PP P P
Sbjct: 100 YPVP-GQEGHQV-PAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPP 157
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 780 KPXPPPRAXRGFXFXAPPXPXPPPTXPP 863
+P PP F PP P PPP PP
Sbjct: 424 RPFPPHHGHHHFPPFWPPCPPPPPFWPP 451
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 759 VXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
V P P PPP PP P PPPT P P
Sbjct: 63 VKATPPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/45 (28%), Positives = 15/45 (33%)
Frame = +3
Query: 729 PXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPP 863
P P R P P +P P P + P P P PP
Sbjct: 151 PIPSALASARPAPFPAAQPPPAPTPTPSYQQQMAPRPQAPAAYPP 195
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 711 GXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXP 872
G P P P P P PP PP P PPP PP P
Sbjct: 26 GPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/58 (32%), Positives = 22/58 (37%)
Frame = +3
Query: 705 PSGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P P+ P P + P P+ P PPP PP P PP PP P P
Sbjct: 32 PPPPPMCAPPPLPCPPPPICP-PQFCP-PPPMCP-----PPPPPPPPPMCPPPPPPMP 82
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 825 APPXPXPPPTXPPXXPRP 878
+PP P PPP PP P P
Sbjct: 353 SPPAPPPPPPPPPPPPPP 370
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 771 PKXKPXPPPRAXRGFXFXAPPXPXPPPTXPP 863
P KP PPP + PP P PP PP
Sbjct: 85 PPAKPTPPPPPPKP-TIRPPPIPASPPPRPP 114
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 771 PKXKPXPPPRAXRGFXFXAPPXPXPPPTXPP 863
P KP PPP + PP P PP PP
Sbjct: 307 PPAKPTPPPPPPKP-TIRPPPIPASPPPRPP 336
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +3
Query: 771 PKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P +P P + APP P P PP P P
Sbjct: 690 PPARPEAPKKDETAVDAAAPPRPPPAARPPPPRPAP 725
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/58 (36%), Positives = 23/58 (39%)
Frame = +3
Query: 705 PSGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P G P P P G P P PPP F APP P PPP+ P+P
Sbjct: 80 PGGIP---PPPPMFAGGIPPPPPMMGGIPPPPPM----FGAPPPP-PPPSGLGVAPQP 129
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +3
Query: 717 PLXFPXPRGXVGERVXPXPKXKPX-PPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P +P G V P +P PPP PP P P P PP P
Sbjct: 119 PQFYPAQPGPAVPAVIPPVVTQPIVPPPVPEVSEPVPEPPIPAPGPVAPPTPSGP 173
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 765 PXPKXKPXPPPRAXRGFXFXAPPXPXPPPT 854
P P P PPP PP P PPPT
Sbjct: 1336 PSPPPPPPPPPPPSDDLT-PVPPPPPPPPT 1364
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +3
Query: 756 RVXPXPKXKPXPPPRAXRGFXFXAP-PXPXPPPTXPPXXPRP 878
+ P P K PPP + AP P P P P P P
Sbjct: 197 KAPPPPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPAPNPPAP 238
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/72 (29%), Positives = 25/72 (34%), Gaps = 7/72 (9%)
Frame = +3
Query: 669 PLXPXQKXX*KXPSGXP-LXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAP----- 830
P P + PS P + FP G P KP PPP + +P
Sbjct: 426 PKTPTRVAPPPPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEV 485
Query: 831 -PXPXPPPTXPP 863
P PPP PP
Sbjct: 486 SKSPPPPPPLPP 497
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 783 PXPPPRAXRGFXFXAPPXPXPP 848
P PPP G + APP P PP
Sbjct: 39 PPPPPPPPCGGGYEAPPPPPPP 60
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/58 (32%), Positives = 22/58 (37%)
Frame = +3
Query: 705 PSGXPLXFPXPRGXVGERVXPXPKXKPXPPPRAXRGFXFXAPPXPXPPPTXPPXXPRP 878
P+ P P P+ V P + P PPP P P PPP PP P P
Sbjct: 108 PAPAPPPAPYPQHAVPAPA-PYQQQPPPPPP---------PPHYPPPPPHYPPPPPAP 155
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Frame = +3
Query: 717 PLXFPXPRGXVGERVXPXPKXKPXPPPR----AXRGFXFXAPPXPXPPPTXPPXXP 872
P+ P P + P P P P P+ A + PP P PPP PP P
Sbjct: 93 PVPAPPP-APYPQHAVPAPAPPPAPYPQHAVPAPAPYQ-QQPPPPPPPPHYPPPPP 146
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 717 PLXFPXPRGXVGERVXPXPKXKPXPPPR 800
P P P G +G + P PK P PP+
Sbjct: 187 PTGAPGPMGAMGPKGPPGPKGSPGEPPQ 214
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 717 PLXFPXPRGXVGERVXPXPKXKPXPPPR 800
P P P G +G + P PK P PP+
Sbjct: 187 PTGAPGPMGAMGPKGPPGPKGSPGEPPQ 214
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/72 (30%), Positives = 24/72 (33%), Gaps = 4/72 (5%)
Frame = +3
Query: 645 GTPWLXXTPLXPXQKXX*KXPSGXPLXF----PXPRGXVGERVXPXPKXKPXPPPRAXRG 812
G P+ P Q P G P F P P G G P P PPP+
Sbjct: 675 GFPFQHQLTQLPGQPRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPP 734
Query: 813 FXFXAPPXPXPP 848
F P P PP
Sbjct: 735 MGFD-PNKPPPP 745
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,910,871
Number of Sequences: 27780
Number of extensions: 134924
Number of successful extensions: 1610
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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