Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_K15
(1005 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.007
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.084
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.084
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.11
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.45
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.59
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 0.78
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.78
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 23 5.0
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 5.5
SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual 26 7.3
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 26 9.6
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 9.6
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.3 bits (80), Expect = 0.007
Identities = 21/66 (31%), Positives = 24/66 (36%)
Frame = +1
Query: 307 SSXXXXPPGXPXXLGIXPAXPCAXXRPPHGPXPGXXPRXLXXXPPXXPPPPXPXPPXGXX 486
S+ PP P L + P A PP P P + PP PP P PP
Sbjct: 426 SAPPSLPPSAPPSLPM--GAPAAPPLPPSAPIAPPLPAGMPAAPPL--PPAAPAPPPAPA 481
Query: 487 PPPLQP 504
P P P
Sbjct: 482 PAPAAP 487
Score = 33.9 bits (74), Expect = 0.036
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 385 PPHGPXPGXXPRXLXXXPPXXPPPPXPXPPXGXXPPPLQPXXATXPXXNXPP 540
PP G P PPPP P G PPPL A PP
Sbjct: 342 PPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 27.5 bits (58), Expect = 3.2
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +1
Query: 358 PAXPCAXXRPPHGPXPGXXPRXLXXXPPXXPPPPXPXPPXGXXPPPLQPXXATXP 522
P P PP P P P P P P P PP PPL P
Sbjct: 415 PPVPTPPSLPPSAP-PSLPPSAPPSLPMGAPAAP-PLPPSAPIAPPLPAGMPAAP 467
Score = 23.0 bits (47), Expect(2) = 3.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 961 NXSPXPPPPPP 993
N S PPPPPP
Sbjct: 333 NSSLPPPPPPP 343
Score = 22.6 bits (46), Expect(2) = 3.3
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 976 PPPPPPXPXP 1005
PPPPPP P
Sbjct: 361 PPPPPPRSAP 370
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.7 bits (71), Expect = 0.084
Identities = 21/65 (32%), Positives = 21/65 (32%)
Frame = -2
Query: 521 GXVAXXG*RGGGXXPXGGXGXGGGGXXGGXXXXNRGXXPGXGPWGGLXXAQGXAGXIPKX 342
G G G GG G G GG GG G G GG G G P
Sbjct: 208 GGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Query: 341 XGXPG 327
G PG
Sbjct: 268 HGGPG 272
Score = 29.9 bits (64), Expect = 0.59
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = -2
Query: 494 GGGXXPXGGXGXGGGGXXGGXXXXNRGXXPGXGPWGGLXXAQGXAGXIPKXXG 336
G G P G G GG G GG + G G GG G G P G
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFG 248
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 496 GGGXXPPXXXGVXGGXGXXGXGXXXTGAXXRGXGRGG 386
G G PP G G G G G G G G GG
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGG 232
Score = 26.2 bits (55), Expect = 7.3
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Frame = -2
Query: 464 GXGGGGXXGGXXXXNRGXXPGXGPWGGLXXAQGXA---GXIPKXXGXPGG 324
G GGG GG + G PG G +GG G G G PGG
Sbjct: 184 GHNGGGF-GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGG 232
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.7 bits (71), Expect = 0.084
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 381 KAPPRPXPRXXAPVXXXPSPXXPXPPXTPXXXGGXXPPP 497
K+PP P P P P+P P PP P G PPP
Sbjct: 730 KSPPPPPPAVIVPT-PAPAP-IPVPPPAPIMGGPPPPPP 766
Score = 32.3 bits (70), Expect = 0.11
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 385 PPHGPXPGXXPRXLXXXPPXXPPPPXPXPPXGXXPPPLQPXXA 513
P P P P + PP PPPP P PPP P A
Sbjct: 744 PAPAPIPVPPPAPIMGGPP--PPPPPPGVAGAGPPPPPPPPPA 784
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = +1
Query: 325 PPGXPXXLGIXPAXPCAXXRPPHGPXPGXXPRXLXXXPPXXPPPPXPXPPXG 480
P P + + P P PP P PG + P PPPP P G
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPG-----VAGAGPPPPPPPPPAVSAG 788
Score = 28.3 bits (60), Expect = 1.8
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +1
Query: 403 PGXXPRXLXXXPPXXP-PPPXPXPPXGXXPPPLQPXXATXPXXNXPP 540
P P + P P P P P P G PPP P PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 27.5 bits (58), Expect = 3.2
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = +1
Query: 325 PPGXPXXLGIXPAXPCAXXRPPHGPXPGXXPRXLXXXPPXXPPPPXPXPPXGXXPPP 495
PP P + + P PP P G P PP PP P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP------PPPPPPGVAGAGPPPPPPPP 782
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +3
Query: 390 PRPXPRXXAPVXXXPSPXXPXPPXTPXXXGGXXPPP 497
P P P P P PP P G PPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 26.2 bits (55), Expect = 7.3
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +1
Query: 385 PPHGPXPGXXPRXLXXXPPXXPPPPXPXPPXGXXPPPLQPXXATXPXXNXPP 540
PP P P P PP P P PPP P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.3 bits (70), Expect = 0.11
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 388 PHGPXPGXXPRXLXXXPPXXPPPPXPXPPXGXXPPPLQPXXATXPXXNXPP 540
P P R PP P P PP PPP P P PP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 30.3 bits (65), Expect = 0.45
Identities = 20/58 (34%), Positives = 23/58 (39%)
Frame = +1
Query: 349 GIXPAXPCAXXRPPHGPXPGXXPRXLXXXPPXXPPPPXPXPPXGXXPPPLQPXXATXP 522
G+ PA P + PP P P+ PP PP P PP P P P A P
Sbjct: 1680 GMAPAHPVST--PPVRPQSAAPPQMSAPTPPP-PPMSVP-PPPSAPPMPAGPPSAPPP 1733
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 385 PPHGPXPGXXPRXLXXXPPXXPPPPXPXPPXGXXPPPL 498
PP P P + PP PP P P PPPL
Sbjct: 1699 PPQMSAPTPPPPPMSVPPP-PSAPPMPAGPPSAPPPPL 1735
Score = 27.1 bits (57), Expect = 4.2
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +1
Query: 385 PPHGPXPGXXPRXLXXXPPXXPPPPXPXPPXGXXPPP 495
PP P + PP PPPP P P P
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.45
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = +1
Query: 373 AXXRPPHGPXPGXXPRXLXXXPPXXPPPPXPXPPXGXXPPPLQPXXATXPXXNXPP 540
A PP P P P+ P PP P PP PP+ P PP
Sbjct: 120 ASAAPPSAPAP-PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 28.7 bits (61), Expect = 1.4
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 967 SPXPPPPPPXPXP 1005
+P PPPPPP P P
Sbjct: 2 APAPPPPPPAPAP 14
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 436 PPXXPPPPXPXPPXGXXPPPL 498
P PPPP P P PPL
Sbjct: 3 PAPPPPPPAPAPAAAAPAPPL 23
Score = 27.1 bits (57), Expect = 4.2
Identities = 25/84 (29%), Positives = 28/84 (33%), Gaps = 6/84 (7%)
Frame = +1
Query: 307 SSXXXXPPGXPXXLGIXPAXPCAXXRPPHG--PXPGXXPRXLXXXPPXX---PPPPXPXP 471
SS PP P P P + RPP P P P PP PP P P
Sbjct: 118 SSASAAPPSAPA-----PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLP 172
Query: 472 PXGXXPPPLQ-PXXATXPXXNXPP 540
P P++ P A PP
Sbjct: 173 PPAQPAAPVKSPPSAPSLPSAVPP 196
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.59
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 436 PPXXPPPPXPXPPXGXXPPP 495
PP PPPP PP PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPP 28
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 436 PPXXPPPPXPXPPXGXXPPPLQPXXATXP 522
PP PPPP P P PP QP P
Sbjct: 5 PPGNPPPPPPPP---GFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 4.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 385 PPHGPXPGXXPRXLXXXPPXXPPPPXP 465
PP P P P PP PPPP P
Sbjct: 5 PPGNPPPPPPPPGFE--PPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 952 SLXNXSPXPPPPPPXPXP 1005
SL +P PPPPPP P
Sbjct: 3 SLPPGNPPPPPPPPGFEP 20
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.5 bits (63), Expect = 0.78
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -2
Query: 503 G*RGGGXXPXGGXGXGGGGXXGGXXXXNRGXXPGXGPWGGLXXAQG 366
G RGG GG G GGG G G G G GG +G
Sbjct: 13 GSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRG 58
Score = 28.3 bits (60), Expect = 1.8
Identities = 23/62 (37%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Frame = -2
Query: 503 G*RGGGXXPXGGXG--XGGGGXXGGXXXXNRGXXPGXGPWGGLXXAQGXAGXIPKXXGXP 330
G RGG GG G GG G GG RG G G GG G G G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRG-GARGGRGGRGGARGGRGGSSGGR 64
Query: 329 GG 324
GG
Sbjct: 65 GG 66
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.78
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +3
Query: 381 KAPPRPXPRXXAPVXXXPS--PXXPXPPXTPXXXGGXXPPPS 500
KAPP P P AP PS P P P TP PS
Sbjct: 1020 KAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPS 1061
Score = 28.7 bits (61), Expect = 1.4
Identities = 18/71 (25%), Positives = 20/71 (28%)
Frame = +1
Query: 328 PGXPXXLGIXPAXPCAXXRPPHGPXPGXXPRXLXXXPPXXPPPPXPXPPXGXXPPPLQPX 507
P P P P PP P P + PP P P PPP +
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPV-PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
Query: 508 XATXPXXNXPP 540
P PP
Sbjct: 1199 PVPKPSVGVPP 1209
Score = 27.9 bits (59), Expect = 2.4
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 6/49 (12%)
Frame = +3
Query: 384 APPRPXPRXXAPVXXXPSPXXPXP------PXTPXXXGGXXPPPSTXXG 512
APP P P AP PS P P P P G P P G
Sbjct: 1139 APPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAG 1187
Score = 27.1 bits (57), Expect = 4.2
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 387 PPRPXPRXXAPVXXXPSPXXPXPPXTPXXXGGXXPPPST 503
PP P P P PS P P P PPPST
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPK--PSVGVPPVPPPST 1215
Score = 25.8 bits (54), Expect = 9.6
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 384 APPRPXPRXXAPVXXXPSPXXPXPPXTPXXXGGXXPPPS 500
APP P P AP PS P P P P PS
Sbjct: 1120 APPVPKPSVAAPPVPVPSGAPPVP--KPSVAAPPVPAPS 1156
Score = 25.8 bits (54), Expect = 9.6
Identities = 18/74 (24%), Positives = 23/74 (31%), Gaps = 3/74 (4%)
Frame = +1
Query: 325 PPGXPXXLGIXPAXPCAXXRPPHGPXPGXXPRXLXXXPPXXPPPP---XPXPPXGXXPPP 495
PP G+ P P + P P G P P P P P P PP
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Query: 496 LQPXXATXPXXNXP 537
+ + P + P
Sbjct: 1239 VPAPSSEAPSVSTP 1252
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 23.0 bits (47), Expect(2) = 5.0
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +1
Query: 967 SPXPPPPPPXP 999
+P PPPPP P
Sbjct: 237 APPPPPPPTLP 247
Score = 21.8 bits (44), Expect(2) = 5.0
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 976 PPPPPPXPXP 1005
PPPPPP P
Sbjct: 239 PPPPPPTLPP 248
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 5.5
Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 943 SSRSLX-NXSPXPPPPPPXP 999
SSRS N S PPPPPP P
Sbjct: 358 SSRSRWSNISYSPPPPPPPP 377
>SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 26.2 bits (55), Expect = 7.3
Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Frame = +1
Query: 397 PXPGXXPRX-LXXXPPXXPPPPXP 465
P P PR + PP PPPP P
Sbjct: 256 PKPSESPRRSVSSTPPVHPPPPVP 279
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 9.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 976 PPPPPPXPXP 1005
PPPPPP P P
Sbjct: 356 PPPPPPMPAP 365
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.8 bits (54), Expect = 9.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 970 PXPPPPPPXP 999
P PPPPPP P
Sbjct: 905 PTPPPPPPLP 914
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.149 0.529
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,284,703
Number of Sequences: 5004
Number of extensions: 15704
Number of successful extensions: 254
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 521265546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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