Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_K12
(947 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 45 2e-05
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 42 1e-04
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 36 0.008
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 36 0.011
SPBC2A9.02 |||NAD dependent epimerase/dehydratase family protein... 32 0.10
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 29 0.72
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 29 0.96
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 28 1.7
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 27 2.9
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 27 3.9
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 27 5.1
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 27 5.1
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 26 8.9
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 44.8 bits (101), Expect = 2e-05
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +2
Query: 83 KDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRS 262
K K ITG + GIG S+ + G ++ +L + EL K+G + K Y
Sbjct: 8 KGKTTLITGGSGGIGFSIAKAFAAAG-SNVGLLYGRNKKALEYAAELRDKHGVQAKAYSC 66
Query: 263 DVTNEEHFLGILNAVXQEQGG-IDVVIXNAAL 355
+ N + N +E GG +DV+I NA +
Sbjct: 67 PIENRSAVIETTNQAVEELGGRLDVMIANAGI 98
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 41.9 bits (94), Expect = 1e-04
Identities = 29/105 (27%), Positives = 53/105 (50%)
Frame = +2
Query: 89 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSDV 268
K + ITGA++GIG+S + + + + + EL SKY + DV
Sbjct: 7 KTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPLKLDV 66
Query: 269 TNEEHFLGILNAVXQEQGGIDVVIXNAALMNXSIGIYKKAIEVNV 403
++ + G++ ++ +E IDV+I NA L ++G K I++N+
Sbjct: 67 SDLKSIPGVIESLPKEFADIDVLINNAGL---ALGT-DKVIDLNI 107
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 35.9 bits (79), Expect = 0.008
Identities = 28/89 (31%), Positives = 44/89 (49%)
Frame = +2
Query: 89 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSDV 268
+VV ITGAA GIG+ + ++ + G +A +DI + SK + ++DV
Sbjct: 6 RVVLITGAAGGIGKVLCKMFTELG-DRVAGIDIVDP----------SKVQDAALALQADV 54
Query: 269 TNEEHFLGILNAVXQEQGGIDVVIXNAAL 355
+ + + V Q G IDV+I NA L
Sbjct: 55 SKADQIETAIEKVIQTLGPIDVLINNAGL 83
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 35.5 bits (78), Expect = 0.011
Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Frame = +2
Query: 89 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKY-GNKTKFYRSD 265
KV +TG++ GIG L +G K + + EE + + +++ + +K +F R D
Sbjct: 43 KVALVTGSSGGIGYVTALELARKGAK-VYLAGRNEEKYQKVMKQIHDEVRHSKIRFLRLD 101
Query: 266 VTNEEHFLGILNAVXQEQGGIDVVIXNAALMNXSIGIYKKAIEVNV 403
+ + E + ++ + +++ NA +MN + K E+ +
Sbjct: 102 LLDFESVYQAAESFIAKEEKLHILVNNAGIMNPPFELTKDGYELQI 147
>SPBC2A9.02 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 95 VFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGK 205
+F+TGAA IG +VR LL+ G + + ++ E A K
Sbjct: 3 IFVTGAAGFIGSEIVRQLLEAGHEVVGLVRSEENAAK 39
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 29.5 bits (63), Expect = 0.72
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 74 HEWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQ-VELN 226
H ++DK+V G TGI + G KH+ +D++E K++Q VE+N
Sbjct: 51 HLFRDKIVLDVGCGTGI---LSMFCARAGAKHVYGVDMSEIIHKAVQIVEVN 99
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 29.1 bits (62), Expect = 0.96
Identities = 23/85 (27%), Positives = 41/85 (48%)
Frame = +2
Query: 95 VFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSDVTN 274
V ITG++ G+G ++V++ L +G IA A ++ +E +K + DVT+
Sbjct: 8 VLITGSSKGLGYALVKVGLAQGYNVIA----CSRAPDTITIE-----HSKLLKLKLDVTD 58
Query: 275 EEHFLGILNAVXQEQGGIDVVIXNA 349
+ + G +D+VI NA
Sbjct: 59 VKSVETAFKDAKRRFGNVDIVINNA 83
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 28.3 bits (60), Expect = 1.7
Identities = 19/90 (21%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +2
Query: 86 DKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKS-LQVELNSKYGNKTKFYRS 262
+K +TG +GIG++ + EG + I + EE + + +L + G +
Sbjct: 42 EKKTLLTGGDSGIGKAAAVMFAREG-SDLVISCLPEERDDAEVTRDLIEREGRNCWIWEG 100
Query: 263 DVTNEEHFLGILNAVXQEQGGIDVVIXNAA 352
+ ++ +++ ++ G IDV++ N A
Sbjct: 101 KLDKSDNCRDLVDFALKKLGWIDVLVNNIA 130
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 27.5 bits (58), Expect = 2.9
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 4/117 (3%)
Frame = +2
Query: 65 KMSHEWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYG-- 238
K S+ ++ ITG + +G ++++ LD G +A LD E A ++ NSK+
Sbjct: 28 KQSYSCAKGLIVITGGSGILGHAIIQEALDRGFS-VASLDSTEPAS---FLQYNSKFSAL 83
Query: 239 --NKTKFYRSDVTNEEHFLGILNAVXQEQGGIDVVIXNAALMNXSIGIYKKAIEVNV 403
N TK DV H L +N + L++ S +K E NV
Sbjct: 84 KCNITK--DKDVEGCVHSLKKMNRTPFALINAAAIAPKNHLLSISRQELQKCFETNV 138
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 92 VVFITGAATGIGESVVRILLDEGVKHIAIL 181
VV +TG ++GIG+ VV L G + + +L
Sbjct: 77 VVMVTGGSSGIGQVVVEKLASLGAQVVILL 106
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 26.6 bits (56), Expect = 5.1
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 228 EFSSTCNDFPASSAMSKIAICLTPSSNNILTTDSPMPVAAPV 103
+F T D + M A +T + N+ TTDSPM A PV
Sbjct: 427 DFKET-EDMNGAEDMHGRAPQITKDNLNLTTTDSPMSEAEPV 467
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 80 WKDKVVFITGAATGIGESVVRILLDEGVKHIAILDI 187
+K V + GA GIG +++ LL GVK + I+D+
Sbjct: 23 FKSAKVLLVGAG-GIGCELLKNLLMSGVKEVHIIDL 57
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 25.8 bits (54), Expect = 8.9
Identities = 23/112 (20%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Frame = +2
Query: 77 EWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKY----GNK 244
E +KV+ +TG++ GIG + L + K IA+ ++L ++ + G+
Sbjct: 3 ETAEKVILLTGSSKGIGLATAE-ALQKKAKVIAVSRSLTPELETLLIQNPDSFVHVKGDV 61
Query: 245 TKFYRSDVTNEEHFLGILNAVXQEQGGIDVVIXNAALMNXSIGIYKKAIEVN 400
T+ ++ + G L++V G ++ + A + + I ++K ++N
Sbjct: 62 TEVGKASIETAIKKFGKLDSVILNAGVLEPI---AKIADADINEWRKLFDIN 110
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,502,052
Number of Sequences: 5004
Number of extensions: 38851
Number of successful extensions: 116
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 483319012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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