Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_K08
(855 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical ... 202 3e-52
AL034393-7|CAA22322.2| 337|Caenorhabditis elegans Hypothetical ... 44 1e-04
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 42 7e-04
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 42 7e-04
Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical pr... 38 0.009
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 37 0.016
AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily a... 36 0.049
Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 33 0.20
U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated p... 33 0.26
AJ011523-1|CAB38019.1| 760|Caenorhabditis elegans CHE-2 protein... 33 0.34
AC006635-2|AAK68383.1| 760|Caenorhabditis elegans Abnormal chem... 33 0.34
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 32 0.45
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 32 0.45
Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical pr... 32 0.45
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 32 0.45
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 32 0.60
Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical pr... 31 1.0
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 30 1.8
AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore... 30 1.8
AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical... 30 1.8
U23176-7|AAC46713.4| 454|Caenorhabditis elegans Hypothetical pr... 30 2.4
AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical ... 30 2.4
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 3.2
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 29 3.2
U21321-1|AAG00051.1| 507|Caenorhabditis elegans Fizzy (cdc20 pr... 29 4.2
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical pr... 28 7.4
AL110500-12|CAB60432.1| 362|Caenorhabditis elegans Hypothetical... 28 7.4
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 28 7.4
>AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical
protein Y79H2A.6 protein.
Length = 368
Score = 202 bits (492), Expect = 3e-52
Identities = 93/173 (53%), Positives = 117/173 (67%)
Frame = +1
Query: 268 PITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVT 447
PITCHAWNKDR+QIA S ++N++HI++ DW+ + L EHDL V G+DW TNRIV+
Sbjct: 16 PITCHAWNKDRTQIAVSASSNDIHIFEWRNGDWQSIHTLSEHDLPVTGLDWGTKTNRIVS 75
Query: 448 CSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGARLISICYXEKE 627
CS D+NA+VWT D W LVL+R NRAAT VKWSP+ENKFAVGSGA+L+S+CY EKE
Sbjct: 76 CSQDKNAFVWT-FDKNVWKPELVLVRFNRAATYVKWSPLENKFAVGSGAKLVSVCYYEKE 134
Query: 628 NNWWVSNPY*EAPFVRL*HLLIGLPXTFCSSPGSADFKVXVFSAYIXDIXXPP 786
N+WWVS + P L + GS DFK VFSAY+ ++ P
Sbjct: 135 NDWWVSKQI-KKPIRSTVTCLDWHSNNVLLAVGSCDFKCRVFSAYVKEVDEKP 186
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 1/115 (0%)
Frame = +1
Query: 247 TFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAP 426
T + P+T W ++I + ++ + N WK LV + + W+P
Sbjct: 53 TLSEHDLPVTGLDWGTKTNRIVSCSQDKNAFVWTFDKNVWKPELVLVRFNRAATYVKWSP 112
Query: 427 NTNRIVTCSVDRNAYV-WTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGS 588
N+ S + V + + ++ W + + I TC+ W AVGS
Sbjct: 113 LENKFAVGSGAKLVSVCYYEKENDWWVSKQIKKPIRSTVTCLDWHSNNVLLAVGS 167
>AL034393-7|CAA22322.2| 337|Caenorhabditis elegans Hypothetical
protein Y18D10A.9 protein.
Length = 337
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/96 (21%), Positives = 47/96 (48%)
Frame = +1
Query: 283 AWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDR 462
A++ D + + + V +Y++E ++ + N L H+ V ++ + + TCS D+
Sbjct: 74 AFSNDGKCLVSASFDASVVVYQQEDGEFAEVNKLEGHESEVKCAVFSKSDEFLATCSRDK 133
Query: 463 NAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMEN 570
+ + W Q +D ++ + +L + V W P E+
Sbjct: 134 SVWFWQQDEDEDFSVSSILQPHTQDVKQVAWHPTED 169
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 271 ITCHAWNKDRSQIAFSPNNNEVHIYKK-EGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVT 447
+ C ++K +A + V +++ E D+ ++ L H V + W P + +V+
Sbjct: 114 VKCAVFSKSDEFLATCSRDKSVWFWQQDEDEDFSVSSILQPHTQDVKQVAWHPTEDLLVS 173
Query: 448 CSVDRNAYVWTQGDDGKWAT 507
CS D + + + D W T
Sbjct: 174 CSYDSSIRFY-RFDGEDWVT 192
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/105 (22%), Positives = 45/105 (42%)
Frame = +1
Query: 274 TCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 453
+C A + D+ +A +++VH+YK G + +V H + + ++ N +V
Sbjct: 452 SCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIV-HPAEITSVAFSNNGAFLVATD 510
Query: 454 VDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGS 588
R ++ ++ + A T CV WSP + A GS
Sbjct: 511 QSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGS 555
Score = 35.9 bits (79), Expect = 0.037
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 265 APITCHAWNKDRSQIAFSPNNNEVHIYKKEGN-DWKQTNNLVEHDLRVMGIDWAPNTNRI 441
A IT A++ + + + + + +V Y N + TN+ H +V + W+P+ R+
Sbjct: 492 AEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRL 551
Query: 442 VTCSVDRNAYVW 477
T S+D + VW
Sbjct: 552 ATGSLDNSVIVW 563
Score = 33.1 bits (72), Expect = 0.26
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = +1
Query: 247 TFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYK-----KEGNDWKQTNNLVEHDLRVMG 411
TFG+ + +N D S A + + + +Y K G + V H V G
Sbjct: 185 TFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG 244
Query: 412 IDWAPNTNRIVTCSVDRNAYVW 477
+ W+P+ +I + S D+ +W
Sbjct: 245 LTWSPDGTKIASASADKTIKIW 266
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/105 (22%), Positives = 45/105 (42%)
Frame = +1
Query: 274 TCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 453
+C A + D+ +A +++VH+YK G + +V H + + ++ N +V
Sbjct: 452 SCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIV-HPAEITSVAFSNNGAFLVATD 510
Query: 454 VDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGS 588
R ++ ++ + A T CV WSP + A GS
Sbjct: 511 QSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGS 555
Score = 35.9 bits (79), Expect = 0.037
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 265 APITCHAWNKDRSQIAFSPNNNEVHIYKKEGN-DWKQTNNLVEHDLRVMGIDWAPNTNRI 441
A IT A++ + + + + + +V Y N + TN+ H +V + W+P+ R+
Sbjct: 492 AEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRL 551
Query: 442 VTCSVDRNAYVW 477
T S+D + VW
Sbjct: 552 ATGSLDNSVIVW 563
Score = 33.1 bits (72), Expect = 0.26
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = +1
Query: 247 TFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYK-----KEGNDWKQTNNLVEHDLRVMG 411
TFG+ + +N D S A + + + +Y K G + V H V G
Sbjct: 185 TFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG 244
Query: 412 IDWAPNTNRIVTCSVDRNAYVW 477
+ W+P+ +I + S D+ +W
Sbjct: 245 LTWSPDGTKIASASADKTIKIW 266
>Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical
protein K08F9.2 protein.
Length = 600
Score = 37.9 bits (84), Expect = 0.009
Identities = 21/105 (20%), Positives = 42/105 (40%)
Frame = +1
Query: 274 TCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 453
TC A+ ++S +A + +VH+YK G+ + +EH + + ++ + +
Sbjct: 440 TCVAFCAEKSLVAVGGKDAKVHVYKLNGDGRLEELKKIEHSAEITAVSFSDDGEYLAVTD 499
Query: 454 VDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGS 588
+ R ++ D + V WSP + A GS
Sbjct: 500 LARKVIPYSVSTDFSVTSPNSWTFHTSKVLTVAWSPDNQRLATGS 544
Score = 35.1 bits (77), Expect = 0.064
Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = +1
Query: 265 APITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQT--NNLVEHDLRVMGIDWAPNTNR 438
A IT +++ D +A + +V Y D+ T N+ H +V+ + W+P+ R
Sbjct: 481 AEITAVSFSDDGEYLAVTDLARKVIPYSVS-TDFSVTSPNSWTFHTSKVLTVAWSPDNQR 539
Query: 439 IVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKW 555
+ T S+D + +W G+ + + V+W
Sbjct: 540 LATGSIDTSVIIWDMKKPGEHPVIIKGAHPMSSVNVVRW 578
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +1
Query: 286 WNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNL-----VEHDLRVMGIDWAPNTNRIVTC 450
+N D S A + ++ V +Y G D ++ L V H + + W+P+ +RI T
Sbjct: 198 YNNDGSLFASTGSDGTVVLYN--GVDGEKVGVLEDAKGVAHTGSIFALAWSPDQSRIATA 255
Query: 451 SVDRNAYVW 477
S D++ +W
Sbjct: 256 SADKSVKIW 264
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 37.1 bits (82), Expect = 0.016
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 358 NDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQ 483
++W + + ++ H L V I W P+ R++T S DR A ++T+
Sbjct: 596 SNWSKKSEIIGHQLTVTQIAWNPSGTRLLTVSRDRTAKLYTE 637
>AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily
assigned gene nameprotein 305 protein.
Length = 869
Score = 35.5 bits (78), Expect = 0.049
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 343 YKKEGNDWKQTN-NLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVL 519
+K +D + N NL H + + W + +++ +C YVW + DD +W+ LV
Sbjct: 51 FKPTPDDLTRYNFNLRGHHNAIRMVTWNKSQSKLASCDASGIIYVWVRNDD-RWSVELVN 109
Query: 520 LRINRAATCVKWSP 561
R + + + WSP
Sbjct: 110 DRGVKVSD-LSWSP 122
>Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical
protein T04A8.7a protein.
Length = 681
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 358 NDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC----SVDRNAYVWTQGDDGKWATTL 513
+ +KQ V+ D V G++WAP ++ + D+NA V+ + + GKW+ T+
Sbjct: 51 SSYKQFGLNVQPDNSVKGLEWAPAAEKLALIGDFNNWDQNANVYKKEEHGKWSITV 106
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +1
Query: 394 DLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMENK 573
D + G+ +AP + T S D A VW D ++ VL C+ W P +
Sbjct: 217 DEAIRGLAFAPTDVKFATASDDGTARVW---DFARYTEERVLRGHGAEVRCIDWHPTKGL 273
Query: 574 FAVGS 588
A GS
Sbjct: 274 IATGS 278
>U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated
protein 78, isoform b protein.
Length = 517
Score = 33.1 bits (72), Expect = 0.26
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = +1
Query: 247 TFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYK-----KEGNDWKQTNNLVEHDLRVMG 411
TFG+ + +N D S A + + + +Y K G + V H V G
Sbjct: 185 TFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG 244
Query: 412 IDWAPNTNRIVTCSVDRNAYVW 477
+ W+P+ +I + S D+ +W
Sbjct: 245 LTWSPDGTKIASASADKTIKIW 266
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +1
Query: 274 TCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 453
+C A + D+ +A +++VH+YK G + +V H + + ++ N +V
Sbjct: 452 SCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIV-HPAEITSVAFSNNGAFLVATD 510
Query: 454 VDR 462
R
Sbjct: 511 QSR 513
>AJ011523-1|CAB38019.1| 760|Caenorhabditis elegans CHE-2 protein
protein.
Length = 760
Score = 32.7 bits (71), Expect = 0.34
Identities = 29/114 (25%), Positives = 43/114 (37%)
Frame = +1
Query: 271 ITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 450
+ C AW+ S + + N H Y K HD ++ DW P ++ IVT
Sbjct: 148 VYCVAWDSTSSNVLYC---NADHCYIKSLKMQVAPIKWKAHDGIILCCDWNPTSDLIVTG 204
Query: 451 SVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGARLISIC 612
D VW DG + T + W+ FAVGS ++ +C
Sbjct: 205 GEDLKFKVW----DGFGQILFNSSVHDYPITSISWNTDGTLFAVGS-HNILRLC 253
>AC006635-2|AAK68383.1| 760|Caenorhabditis elegans Abnormal
chemotaxis protein 2 protein.
Length = 760
Score = 32.7 bits (71), Expect = 0.34
Identities = 29/114 (25%), Positives = 43/114 (37%)
Frame = +1
Query: 271 ITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 450
+ C AW+ S + + N H Y K HD ++ DW P ++ IVT
Sbjct: 148 VYCVAWDSTSSNVLYC---NADHCYIKSLKMQVAPIKWKAHDGIILCCDWNPTSDLIVTG 204
Query: 451 SVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGARLISIC 612
D VW DG + T + W+ FAVGS ++ +C
Sbjct: 205 GEDLKFKVW----DGFGQILFNSSVHDYPITSISWNTDGTLFAVGS-HNILRLC 253
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 32.3 bits (70), Expect = 0.45
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 286 WNKDRSQIAFSPNNNEVHIY-KKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDR 462
++KD S I N++ V ++ K G K+ H + + ++ N I++CS D
Sbjct: 315 FSKDNSHILSGGNDHVVRVHGMKSGKCLKEMRG---HSSYITDVRYSDEGNHIISCSTDG 371
Query: 463 NAYVWTQGDDGKWATT 510
+ VW G G+ +T
Sbjct: 372 SIRVW-HGKSGECLST 386
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 32.3 bits (70), Expect = 0.45
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 364 WKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGD 489
W+ L HD R++ +D +P+ + + + DR +W Q D
Sbjct: 454 WQPLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLWAQSD 495
>Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical
protein ZK1307.6 protein.
Length = 702
Score = 32.3 bits (70), Expect = 0.45
Identities = 24/107 (22%), Positives = 37/107 (34%)
Frame = +1
Query: 271 ITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 450
+ C AWN D I + + +D L H V G+ W+P+ + +
Sbjct: 483 VGCLAWNADT--ICSGSRDRTIMHRDIRCDDNDMGRKLTNHRQEVCGLKWSPDKQLLASG 540
Query: 451 SVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSG 591
D VW + T + N A + WSP + V G
Sbjct: 541 GNDNQLLVWNLRRNEPIQT---YTQHNAAVKALAWSPHHHGLLVSGG 584
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 32.3 bits (70), Expect = 0.45
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 286 WNKDRSQIAFSPNNNEVHIY-KKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDR 462
++KD S I N++ V ++ K G K+ H + + ++ N I++CS D
Sbjct: 315 FSKDNSHILSGGNDHVVRVHGMKSGKCLKEMRG---HSSYITDVRYSDEGNHIISCSTDG 371
Query: 463 NAYVWTQGDDGKWATT 510
+ VW G G+ +T
Sbjct: 372 SIRVW-HGKSGECLST 386
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 31.9 bits (69), Expect = 0.60
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 364 WKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWT 480
W + +L +H V G+ + N +VTCS+D++ V++
Sbjct: 453 WSEVVSLSDHSGPVTGVRFGENARSLVTCSLDKSLRVFS 491
>Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical
protein F53C11.7 protein.
Length = 478
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +1
Query: 268 PITCHAWNK-DRSQIA-FSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNT-NR 438
P+ AWN+ D + IA F ++ EV I L H+ + G+ WAP++ +
Sbjct: 359 PLLRLAWNRNDHNYIATFGQDSKEVLILDLR-LPCTPVARLRNHEATINGLSWAPHSGSH 417
Query: 439 IVTCSVDRNAYVW 477
I T D A +W
Sbjct: 418 ICTAGDDYQALIW 430
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +1
Query: 325 NNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 477
NN +Y N K +L H L V +D AP++ VT SVD++ VW
Sbjct: 565 NNTCSVYFV--NTLKFFVSLYGHSLPVTCVDIAPSSKLCVTGSVDKSVKVW 613
>AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform a protein.
Length = 313
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Frame = +1
Query: 343 YKKEGNDWKQTNNLVEHDLRVMGIDWAPNT------NRIVTCSVDRNAYVWTQGD-DGKW 501
Y N+W + H+ V + WAP + R+V+ D+N +W D +W
Sbjct: 135 YDNSSNEWISSKIQKCHEQGVNSVCWAPGSADPAAKKRLVSAGNDKNVKIWAFDDATNEW 194
Query: 502 ATTLVLLRINRAATCVKWSPMEN 570
L W P+ N
Sbjct: 195 ILEKTLAGHTDFVREAAWCPVTN 217
>AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical
protein Y110A7A.8 protein.
Length = 504
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -1
Query: 489 ISLSPDVSITV-NRTRNNTVGVGS-PINPHHSKVVFHKVVCLLP 364
++ P ++ V +T+ N +G + NPHH + FH++V +P
Sbjct: 250 LATMPSCNVQVLGKTKKNLIGFSTVSTNPHHGFIYFHQLVQKMP 293
>U23176-7|AAC46713.4| 454|Caenorhabditis elegans Hypothetical
protein F21H12.1 protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.4
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +1
Query: 247 TFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIY 345
TF C P++C +W++D ++ S +N + ++
Sbjct: 62 TFSAHCLPVSCLSWSRDGRKLLTSSADNSIAMF 94
>AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical
protein Y43F4B.4 protein.
Length = 363
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 346 KKEGNDWKQTNNLVEHDLRVMGIDWA-PNTNRIV-TCSVDRNAYVWTQ 483
K +GN W+++ + H V + WA P +IV TCS DR +W +
Sbjct: 47 KPDGN-WRRSAHWKCHGGAVWRVIWAHPEFGQIVATCSYDRTIVIWEE 93
Score = 29.5 bits (63), Expect = 3.2
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 412 IDWAPNTNRIVTCSVDRNAYVWTQGDDGKW 501
+ + P+ R+ TC+ D +W + DG W
Sbjct: 23 VSFDPHGRRMATCASDMTMAIWDRKPDGNW 52
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 1/106 (0%)
Frame = +1
Query: 280 HAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVD 459
H W + +A + NN V Y K+GN + + +++ I W + + +
Sbjct: 40 HRWRPNGHTVAVACANNTVIYYDKKGN----VIDALNPTGKLIDIAWDKEGDVLAIAVAN 95
Query: 460 RNA-YVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGA 594
Y+W TC+ WSP +G+ A
Sbjct: 96 TGTIYLWDVNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIGNNA 141
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 1/106 (0%)
Frame = +1
Query: 280 HAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVD 459
H W + +A + NN V Y K+GN + + +++ I W + + +
Sbjct: 40 HRWRPNGHTVAVACANNTVIYYDKKGN----VIDALNPTGKLIDIAWDKEGDVLAIAVAN 95
Query: 460 RNA-YVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGA 594
Y+W TC+ WSP +G+ A
Sbjct: 96 TGTIYLWDVNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIGNNA 141
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 1/106 (0%)
Frame = +1
Query: 280 HAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVD 459
H W + +A + NN V Y K+GN + + +++ I W + + +
Sbjct: 40 HRWRPNGHTVAVACANNTVIYYDKKGN----VIDALNPTGKLIDIAWDKEGDVLAIAVAN 95
Query: 460 RNA-YVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGA 594
Y+W TC+ WSP +G+ A
Sbjct: 96 TGTIYLWDVNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIGNNA 141
>U21321-1|AAG00051.1| 507|Caenorhabditis elegans Fizzy (cdc20
protein family) homologprotein 1 protein.
Length = 507
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 325 NNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 477
N++V I + + W N H V ++W+ + N V+ S DR A +W
Sbjct: 295 NHDVRISQHVVSSWGGDNG---HCRDVTALEWSADENMCVSGSSDRTAKIW 342
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/82 (20%), Positives = 39/82 (47%)
Frame = +1
Query: 232 MAQTLTFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMG 411
MA T+ I A++ D + +A S + ++ + G + + + + H VM
Sbjct: 28 MAPTMVLLGHEGEIYTGAFSPDGTCLATSGYDQKIFFWNVYG-ECENFSTIKGHSGAVMD 86
Query: 412 IDWAPNTNRIVTCSVDRNAYVW 477
+ + +++ +V+C D++ VW
Sbjct: 87 LKFTTDSSSLVSCGTDKSVRVW 108
>Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical
protein R01H10.3d protein.
Length = 495
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Frame = +1
Query: 391 HDLRVMGIDWAP-NTNRIVTCSVDRNAYVWTQGDDG----KWATTLVLLRINRAATCVKW 555
H + + W+P N N I +CS D VW D G + L + + W
Sbjct: 78 HKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAW 137
Query: 556 SPMENKFAVGSG 591
P+ N + +G
Sbjct: 138 HPVANNVLLTAG 149
>Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical
protein R01H10.3c protein.
Length = 607
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Frame = +1
Query: 391 HDLRVMGIDWAP-NTNRIVTCSVDRNAYVWTQGDDG----KWATTLVLLRINRAATCVKW 555
H + + W+P N N I +CS D VW D G + L + + W
Sbjct: 78 HKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAW 137
Query: 556 SPMENKFAVGSG 591
P+ N + +G
Sbjct: 138 HPVANNVLLTAG 149
>Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical
protein R01H10.3b protein.
Length = 538
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Frame = +1
Query: 391 HDLRVMGIDWAP-NTNRIVTCSVDRNAYVWTQGDDG----KWATTLVLLRINRAATCVKW 555
H + + W+P N N I +CS D VW D G + L + + W
Sbjct: 78 HKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAW 137
Query: 556 SPMENKFAVGSG 591
P+ N + +G
Sbjct: 138 HPVANNVLLTAG 149
>Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical
protein R01H10.3a protein.
Length = 605
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Frame = +1
Query: 391 HDLRVMGIDWAP-NTNRIVTCSVDRNAYVWTQGDDG----KWATTLVLLRINRAATCVKW 555
H + + W+P N N I +CS D VW D G + L + + W
Sbjct: 78 HKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAW 137
Query: 556 SPMENKFAVGSG 591
P+ N + +G
Sbjct: 138 HPVANNVLLTAG 149
>Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical protein
F36D3.5 protein.
Length = 1152
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +1
Query: 337 HIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDD 492
HI+ E D K TN+ +E + + APNT ++ D N + T D
Sbjct: 931 HIWMDERTDNKITNDFMEKFQAITSDEAAPNTTHVIV-KTDENGVLETDDLD 981
>AL110500-12|CAB60432.1| 362|Caenorhabditis elegans Hypothetical
protein Y87G2A.11 protein.
Length = 362
Score = 28.3 bits (60), Expect = 7.4
Identities = 29/132 (21%), Positives = 50/132 (37%), Gaps = 16/132 (12%)
Frame = +1
Query: 232 MAQTLTFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDW---KQTNNLVEHDLR 402
M++ L FG C + D I F N + K + N + + L+ R
Sbjct: 1 MSECLMFGMDCEARCMTSMTADEENICFLVGTNNIKNDKNQVNKLFMDPEASRLMSKTFR 60
Query: 403 -----VMGIDWAPNTNRIV-TCSVDRNAY-------VWTQGDDGKWATTLVLLRINRAAT 543
V I P + I+ TC+ D ++ +W +D + T+ L + +
Sbjct: 61 HPAGEVRAIAAHPTKSTILATCTADFSSLGGTHSITIWNIEEDKRTLETVSRLPTEQVMS 120
Query: 544 CVKWSPMENKFA 579
C++W P K A
Sbjct: 121 CLEWEPNSMKCA 132
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +1
Query: 409 GIDWAP-NTNRIVTCSVDRNAYVWTQGDDGKWAT-TLVLLRINRAATCVKWSPME 567
G+ W+ T + T + + Y+W + G+WA L ++ + WSP E
Sbjct: 233 GLAWSSLKTGDLATGDIIKKIYLWQMKEGGQWAVGANPLTGHKKSVEDLAWSPTE 287
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,867,869
Number of Sequences: 27780
Number of extensions: 400739
Number of successful extensions: 985
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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