Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_K05
         (866 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006729-1|AAK93861.1|  319|Caenorhabditis elegans Hypothetical ...   285   2e-77
AC006729-2|AAM15613.1|  165|Caenorhabditis elegans Hypothetical ...    90   2e-18
AC084159-6|AAK39360.1|   97|Caenorhabditis elegans Hypothetical ...    48   1e-05
Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical pr...    31   0.81 
L25598-7|AAA27938.3|  436|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z75532-2|CAA99812.1|  839|Caenorhabditis elegans Hypothetical pr...    28   9.9  
U43283-1|AAC69025.1|  412|Caenorhabditis elegans Hypothetical pr...    28   9.9  
AF067214-8|AAC17008.1|   69|Caenorhabditis elegans Hypothetical ...    28   9.9  

>AC006729-1|AAK93861.1|  319|Caenorhabditis elegans Hypothetical
           protein Y24D9A.8a protein.
          Length = 319

 Score =  285 bits (700), Expect = 2e-77
 Identities = 137/215 (63%), Positives = 172/215 (80%), Gaps = 1/215 (0%)
 Frame = +1

Query: 82  MSALDQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKD 261
           MS L+QLK  S VVADTGDF A+KE++PTDATTNPSLIL+A+ MEQY  ++D+++ Y K+
Sbjct: 1   MSVLEQLKGASVVVADTGDFNAIKEFQPTDATTNPSLILAASKMEQYAALIDQSVAYAKE 60

Query: 262 NGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIAKAIKFINLFAE 441
           + S  +E +   +D L V+FG EILK IPGRVS EVDARLSFD  ASI +A+  I  + +
Sbjct: 61  HASGHQEVLQAAMDRLFVVFGKEILKTIPGRVSTEVDARLSFDTQASIDRALGLIAQYEK 120

Query: 442 HGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAEANVTLISPFVG 621
            GI K+RILIKLASTWEGI+AAK LE KHGIHCN+TLLF+  QA+ACAE+ VTLISPFVG
Sbjct: 121 EGISKDRILIKLASTWEGIRAAKFLESKHGIHCNMTLLFNFEQAVACAESGVTLISPFVG 180

Query: 622 RILDWYVEHT-KKTYEGXEXPGVVSVTKIYNYYKK 723
           RI+DW+V++T +K Y   + PGVVSVT+I+NYYKK
Sbjct: 181 RIMDWFVKNTDQKAYTRKDDPGVVSVTRIFNYYKK 215



 Score = 55.6 bits (128), Expect = 4e-08
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = +3

Query: 729 YKXQVMGASFRNTGEIRELXGCDLLTISPKLLQEL 833
           YK QVM ASFRNT EI+ L GCDLLTISP LL++L
Sbjct: 218 YKTQVMAASFRNTEEIKGLVGCDLLTISPALLKQL 252


>AC006729-2|AAM15613.1|  165|Caenorhabditis elegans Hypothetical
           protein Y24D9A.8b protein.
          Length = 165

 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 40/61 (65%), Positives = 52/61 (85%), Gaps = 1/61 (1%)
 Frame = +1

Query: 544 LTLLFSLYQAIACAEANVTLISPFVGRILDWYVEHT-KKTYEGXEXPGVVSVTKIYNYYK 720
           +TLLF+  QA+ACAE+ VTLISPFVGRI+DW+V++T +K Y   + PGVVSVT+I+NYYK
Sbjct: 1   MTLLFNFEQAVACAESGVTLISPFVGRIMDWFVKNTDQKAYTRKDDPGVVSVTRIFNYYK 60

Query: 721 K 723
           K
Sbjct: 61  K 61



 Score = 55.6 bits (128), Expect = 4e-08
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = +3

Query: 729 YKXQVMGASFRNTGEIRELXGCDLLTISPKLLQEL 833
           YK QVM ASFRNT EI+ L GCDLLTISP LL++L
Sbjct: 64  YKTQVMAASFRNTEEIKGLVGCDLLTISPALLKQL 98


>AC084159-6|AAK39360.1|   97|Caenorhabditis elegans Hypothetical
           protein Y73B3A.2 protein.
          Length = 97

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 22/30 (73%), Positives = 25/30 (83%)
 Frame = +3

Query: 744 MGASFRNTGEIRELXGCDLLTISPKLLQEL 833
           M ASFRNT EI+ L GCDLLTISP LL++L
Sbjct: 1   MAASFRNTEEIKGLVGCDLLTISPALLKQL 30


>Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical
           protein C33D9.8 protein.
          Length = 604

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +1

Query: 259 DNGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSV-EVDARLSFDKDASIAKAIKFINLF 435
           D  S++ E++ E    ++++      +    +V + E  A+L+ +KD  I K  + I L 
Sbjct: 218 DPSSTMNEELTELRSQMNLIIEYNEKQETVWQVKLSEASAQLN-EKDLVIEKITRKIELL 276

Query: 436 AEHGIKKERILIKLASTWEGIQAAKELEK 522
            E+ +KK++ + +L   +E     K L+K
Sbjct: 277 QENNVKKDQRIYELEQCFESEDYCKILQK 305


>L25598-7|AAA27938.3|  436|Caenorhabditis elegans Hypothetical
           protein C06G4.5 protein.
          Length = 436

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +1

Query: 463 ILIKLASTWEGIQAAKELEK-KHGIHCNLTLLFSLYQAIACAEANVTLISPFVGRILDWY 639
           I++    T  G+    ++EK    I   +   F++YQ I C    + LI+ F  ++L   
Sbjct: 200 IILYAKETAPGMLTRMKIEKCTVDIDSQMFTAFTIYQFILCYCTPLVLIAFFYTKLLSKL 259

Query: 640 VEHTKKTYEGXEXP 681
            EHT +T++  + P
Sbjct: 260 REHT-RTFKSSQIP 272


>Z75532-2|CAA99812.1|  839|Caenorhabditis elegans Hypothetical
           protein C54G10.2 protein.
          Length = 839

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
 Frame = +1

Query: 19  HYRESLRFLSMSGEPDTKRTKMSALDQLKQHSTVVADTGDFEAMKEYKP--TDATTNPSL 192
           H +  ++F S  G+  T   +   L QL QH+ +    G      +Y P      T P L
Sbjct: 634 HLKAMIQFPSWLGKNSTAGKRKRLLQQLVQHTHLKVSAGTHSFATDYAPMLRQKITKPLL 693

Query: 193 ILSAAGMEQYQHILDKAIKYG--KDNGSSIEEQVA 291
              A G+     ++    +Y   KD+  ++ E VA
Sbjct: 694 EHEADGIPD---VISTMTEYDLIKDDTEALTEIVA 725


>U43283-1|AAC69025.1|  412|Caenorhabditis elegans Hypothetical
           protein T25G12.5 protein.
          Length = 412

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
 Frame = +1

Query: 142 EAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKDN---GSSIEEQVAETLDMLS 312
           E  K    T   T P++   A G+      LD A +Y  +    G+ I      +  +  
Sbjct: 255 EGFKVAMKTFDKTRPTVAALATGVAY--RCLDVATQYSLERKAFGTQIANHQGVSFLLAE 312

Query: 313 VLFGCEILKIIPGRVSVEVDARLSFDKDASIAK 411
           +   CE+ +++  +   EVDA       ASIAK
Sbjct: 313 MAINCELARLMTYKSGAEVDAGRPGSYYASIAK 345


>AF067214-8|AAC17008.1|   69|Caenorhabditis elegans Hypothetical
           protein F56C3.8 protein.
          Length = 69

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -1

Query: 455 FLIPCSANKLINLIAFAMLASLSNDNLASTSTDTRPGIIFNI 330
           F++    N ++ LI      SL +D L   +TD +PG++  +
Sbjct: 5   FIVTKMKNTVLLLILALFFISLRDDGLQMPNTDLKPGLLMQM 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,915,360
Number of Sequences: 27780
Number of extensions: 397795
Number of successful extensions: 1109
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)