Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_K02
(899 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC776.11 |rpl2801|rpl28-1|60S ribosomal protein Ll28B 27a|Schi... 109 7e-25
SPCC5E4.07 |rpl2802|rpl28-2|60S ribosomal protein L27a.2/L28A|Sc... 106 5e-24
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.006
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.024
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.055
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.29
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.29
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.68
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.2
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 2.7
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 2.7
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 3.3
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 6.3
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 8.4
>SPBC776.11 |rpl2801|rpl28-1|60S ribosomal protein Ll28B
27a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 148
Score = 109 bits (261), Expect = 7e-25
Identities = 58/147 (39%), Positives = 69/147 (46%)
Frame = +1
Query: 82 PPSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNF 261
P KTRKLRGHVS AGG H R + DKYHPGYFGK+GMR F
Sbjct: 2 PTHTSKTRKLRGHVSAGHGRIGKHRKHPGGRGKAGGLQHLRSHFDKYHPGYFGKVGMRRF 61
Query: 262 HFRKNKNFCPVLNLXKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQP 441
H KN + P +NL +LWTLV +TR KY PVIN++++ P P
Sbjct: 62 HLMKNPLWRPTVNLDRLWTLVPNETREKYLGKNTEVAPVINVLQSGYGKVLGKGRLPDTP 121
Query: 442 VIVXXXXXXXXXXXXIXDVGGACVLSA 522
VI+ I GG L A
Sbjct: 122 VIIQTRYVSRRAEEKIKQAGGVVELIA 148
>SPCC5E4.07 |rpl2802|rpl28-2|60S ribosomal protein
L27a.2/L28A|Schizosaccharomyces pombe|chr 3|||Manual
Length = 148
Score = 106 bits (254), Expect = 5e-24
Identities = 57/147 (38%), Positives = 69/147 (46%)
Frame = +1
Query: 82 PPSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNF 261
P KTRKLRGHVS AGG H R + DKYHPGYFGK+GMR F
Sbjct: 2 PTHVSKTRKLRGHVSAGHGRIGKHRKHPGGRGKAGGLQHLRSHFDKYHPGYFGKVGMRRF 61
Query: 262 HFRKNKNFCPVLNLXKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQP 441
H KN + P +NL +LWTL+ + R KY PVIN++++ P+ P
Sbjct: 62 HLMKNPLWRPTVNLDRLWTLLPNEARDKYLGKNTEVAPVINVLQSGYGKVLGKGRLPETP 121
Query: 442 VIVXXXXXXXXXXXXIXDVGGACVLSA 522
VIV I GG L A
Sbjct: 122 VIVQTRYVSRRAEEKIKQAGGVVELIA 148
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.3 bits (80), Expect = 0.006
Identities = 26/78 (33%), Positives = 26/78 (33%), Gaps = 4/78 (5%)
Frame = +1
Query: 553 PPXXXP---PPXXPPXPPPXXPXXXP-GAPRISPFTSRXNXAPPXXPQXTLXXLXPXXPP 720
PP P PP PP PP P P GAP P APP P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAG---MPAAPPLPP 471
Query: 721 XQCXPQXXVXPXPXXPXA 774
P P P P A
Sbjct: 472 AAPAPPPAPAPAPAAPVA 489
Score = 31.9 bits (69), Expect = 0.13
Identities = 20/74 (27%), Positives = 21/74 (28%)
Frame = +3
Query: 546 PXPPXXXPPPXPPPXPPPXXPPXXPRGXXXXXXXXXXQXGSPXXPXXHFXXTXAPTPPXX 725
P P PP PP PP PP P G +P P P PP
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAG--MPAAPPLPPAA 473
Query: 726 MPXXXXRXPRPTXP 767
P P P
Sbjct: 474 PAPPPAPAPAPAAP 487
Score = 31.5 bits (68), Expect = 0.17
Identities = 27/96 (28%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Frame = +3
Query: 525 NNKXXYLPXPPXXXPPPXPPPXPPPXXPPXXPRGXXXXXXXXXXQXGSPXXPXXHFXXTX 704
+N +P PP PP PPP P G +P P
Sbjct: 345 SNAAGSIPLPPQGRS---APPPPPPRSAP--STGRQPPPLSSSRAVSNPPAPPPAIPGRS 399
Query: 705 APT-PPXXMPXXXXRXPRPTXPXXXXPXSPPPX*PP 809
AP PP P PT P P S PP PP
Sbjct: 400 APALPPLGNASRTSTPPVPTPP--SLPPSAPPSLPP 433
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/73 (28%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Frame = +1
Query: 568 PPPXXPPXPPPXXPXXXPGAPRISP--FTSRXNXAPPXXPQXTLXXLXPXXPPXQCXPQX 741
P P PPP P P R P +SR PP P P PP +
Sbjct: 355 PQGRSAPPPPP--PRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRT 412
Query: 742 XVXPXPXXPXAXP 780
P P P P
Sbjct: 413 STPPVPTPPSLPP 425
Score = 25.8 bits (54), Expect = 8.4
Identities = 19/71 (26%), Positives = 21/71 (29%), Gaps = 1/71 (1%)
Frame = +1
Query: 571 PPXXPPXPPPXXPXXXPGAPRISPFTSRXNXAPPXXPQXTLXXLXPXXPPXQCXPQXXVX 750
PP PP P P S ++ PP P L P PP
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 751 P-XPXXPXAXP 780
P P P A P
Sbjct: 448 PLPPSAPIAPP 458
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.3 bits (75), Expect = 0.024
Identities = 24/87 (27%), Positives = 27/87 (31%)
Frame = +3
Query: 552 PPXXXPPPXPPPXPPPXXPPXXPRGXXXXXXXXXXQXGSPXXPXXHFXXTXAPTPPXXMP 731
PP P PP P P P P+ G P P A PP P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP-----KPAAGVPPVPPP 1194
Query: 732 XXXXRXPRPTXPXXXXPXSPPPX*PPP 812
P+P+ P PPP PP
Sbjct: 1195 SEAPPVPKPS---VGVPPVPPPSTAPP 1218
Score = 29.1 bits (62), Expect = 0.90
Identities = 21/79 (26%), Positives = 23/79 (29%), Gaps = 7/79 (8%)
Frame = +3
Query: 546 PXPPXXXPPPXP------PPXPPPXXPPXXPRGXXXXXXXXXXQXGSPXXPXXHFXXTXA 707
P PP PP P PP PPP P P +P P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSV 1249
Query: 708 PTPPXXMPXXXXR-XPRPT 761
TP +P P PT
Sbjct: 1250 STPRSSVPSPHSNASPSPT 1268
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/82 (23%), Positives = 21/82 (25%)
Frame = +3
Query: 552 PPXXXPPPXPPPXPPPXXPPXXPRGXXXXXXXXXXQXGSPXXPXXHFXXTXAPTPPXXMP 731
PP P PP P P P P+ G+P P P P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPK-PSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Query: 732 XXXXRXPRPTXPXXXXPXSPPP 797
P P P P
Sbjct: 1161 VPKPSVAAPPVPAPSSGIPPVP 1182
Score = 27.1 bits (57), Expect = 3.6
Identities = 20/76 (26%), Positives = 23/76 (30%)
Frame = +1
Query: 553 PPXXXPPPXXPPXPPPXXPXXXPGAPRISPFTSRXNXAPPXXPQXTLXXLXPXXPPXQCX 732
PP P PP P P AP +P + + A P P P P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVP-------VPSGAPPVPK 1144
Query: 733 PQXXVXPXPXXPXAXP 780
P P P A P
Sbjct: 1145 PSVAAPPVPAPSGAPP 1160
Score = 26.6 bits (56), Expect = 4.8
Identities = 20/78 (25%), Positives = 22/78 (28%), Gaps = 2/78 (2%)
Frame = +1
Query: 553 PPXXXPPPXXPPXPPPXXPXXXPGAPRISPFTSRXNXAPP-XXPQXTLXXL-XPXXPPXQ 726
PP P P P P P I P APP P + + P P
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPV 1123
Query: 727 CXPQXXVXPXPXXPXAXP 780
P P P A P
Sbjct: 1124 PKPSVAAPPVPVPSGAPP 1141
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 707 PXXPPXNAXXXPPXXPXHXPXXPXPXXAPPXITP 808
P PP + P P P P APP TP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.1 bits (72), Expect = 0.055
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +3
Query: 552 PPXXXPPPXPPP--XPPPXXPPXXPRG 626
PP PPP PPP PP PP P G
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 32.3 bits (70), Expect = 0.097
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 546 PXPPXXXPPPXPPPXPPP 599
P PP PP PPP PPP
Sbjct: 13 PPPPGFEPPSQPPPPPPP 30
Score = 29.1 bits (62), Expect = 0.90
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 546 PXPPXXXPPPXPPPXPPP 599
P PP PP PP PPP
Sbjct: 12 PPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 8.4
Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Frame = +1
Query: 553 PPXXXPPPXXPP-XPPPXXPXXXP 621
PP PPP PP PP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.7 bits (66), Expect = 0.29
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 552 PPXXXPPPXPPPXPPPXXPP 611
P P P PPP PPP PP
Sbjct: 229 PKQADPLPAPPPPPPPTLPP 248
Score = 23.0 bits (47), Expect(2) = 7.3
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 543 LPXPPXXXPPPXPP 584
LP PP PP PP
Sbjct: 235 LPAPPPPPPPTLPP 248
Score = 21.0 bits (42), Expect(2) = 7.3
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +3
Query: 579 PPPXPPPXXPPXXP 620
PPP P PP P
Sbjct: 273 PPPPATPSQPPRPP 286
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.7 bits (66), Expect = 0.29
Identities = 19/62 (30%), Positives = 21/62 (33%)
Frame = -1
Query: 767 GXXGXGXTXXXGXHXXGGXXGXSXXKVXXGXXGGAXLXREVKGEXRGAPGXXXGXXGGGX 588
G G G + G G G GGA R +G RG G G GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Query: 587 GG 582
GG
Sbjct: 69 GG 70
Score = 29.1 bits (62), Expect = 0.90
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2
Query: 622 RGXXGGXXGGGXGGGXGGGXXXGGXG 545
RG GG GG GGG GG GG G
Sbjct: 25 RGGFGGGRGGARGGGRGGA--RGGRG 48
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 619 GXXGGXXGGGXGGGXGGGXXXGG 551
G GG GGG GG GG GG
Sbjct: 30 GGRGGARGGGRGGARGGRGGRGG 52
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = -1
Query: 680 GXXGGAXLXREVKGEXRGAPGXXXGXXGGGXGGXXGGGXXXGG 552
G GG R +G G G G GG GG GG G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRG 48
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 607 GXXGGGXGGGXGGGXXXGGXGR 542
G GGG GG GGG GR
Sbjct: 26 GGFGGGRGGARGGGRGGARGGR 47
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.5 bits (63), Expect = 0.68
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Frame = +3
Query: 669 PXXPXXHFXXTXAPTP---PXXMPXXXXRXPRPTXPXXXXPXSPPPX*PPP 812
P P T AP P P P P P P PPP PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 6/28 (21%)
Frame = +3
Query: 546 PXPPXXXPPPXPPP------XPPPXXPP 611
P P PPP PPP PPP PP
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Frame = +1
Query: 541 IXXXPPXXXPPPXX----PPXPPPXXPXXXPGAPR 633
I PP PPP PP PPP P G R
Sbjct: 757 IMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 6/31 (19%)
Frame = +3
Query: 546 PXPPXXXPPPXPPPXP------PPXXPPXXP 620
P P PP PPP P PP PP P
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 5/30 (16%)
Frame = +3
Query: 552 PPXXXPPPX-----PPPXPPPXXPPXXPRG 626
PP PPP PPP PPP PP G
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPP--PPAVSAG 788
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 546 PXPPXXXPPPXPPPXPPPXXPPXXP 620
P PP PP P P P PP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/38 (31%), Positives = 13/38 (34%)
Frame = +3
Query: 567 PPPXPPPXPPPXXPPXXPRGXXXXXXXXXXQXGSPXXP 680
PPP P PPP P P G +P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Frame = +3
Query: 543 LPXPPXXXPPPXPPP-XPPPXXP 608
+P PP P P PP PPP P
Sbjct: 1714 VPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +1
Query: 556 PXXXPPPXXPPXPPPXXPXXXPGAPRISPFTSRXNXAPP 672
P PP PP P P P P + APP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.5 bits (58), Expect = 2.7
Identities = 18/68 (26%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = +1
Query: 553 PPXXXPPPXXPPXPPPXXPXXXPGAPRI-SPFTSRXNXAPPXXPQXTLXXLXPXXPPXQC 729
PP P P P P P AP + P + P PQ + P P
Sbjct: 577 PPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQ 636
Query: 730 XPQXXVXP 753
P V P
Sbjct: 637 PPAAPVVP 644
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 619 GXXGGXXGGGXGGGXGGGXXXGGXG 545
G G GGG GG GGG G G
Sbjct: 156 GNSRGGFGGGSRGGFGGGSRGGSRG 180
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = -1
Query: 671 GGAXLXREVKGEXRGA-PGXXXGXXGGGXGGXXGGGXXXG 555
GG R +G RG G G GGG G GGG G
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGG 177
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 622 RGXXGGXXGGGXGGGXGGGXXXGGXG 545
RG G GG GG GGG G G
Sbjct: 147 RGGSRGGFGGNSRGGFGGGSRGGFGG 172
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.0 bits (47), Expect(2) = 7.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 570 PPXPPPXPPPXXPP 611
P PPP PPP PP
Sbjct: 942 PAFPPPPPPP--PP 953
Score = 23.0 bits (47), Expect(2) = 3.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 567 PPPXPPPXP 593
PPP PPP P
Sbjct: 945 PPPPPPPPP 953
Score = 22.2 bits (45), Expect(2) = 3.3
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 555 PXXXPPPXPPP 587
P PPP PPP
Sbjct: 942 PAFPPPPPPPP 952
Score = 21.0 bits (42), Expect(2) = 7.1
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = +3
Query: 522 VNNKXXYLPXPPXXXPPPXPPPXP 593
+ N LP PP PPP P
Sbjct: 891 IPNDATSLPTIITHPTPPPPPPLP 914
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.2 bits (55), Expect = 6.3
Identities = 21/88 (23%), Positives = 24/88 (27%), Gaps = 2/88 (2%)
Frame = +3
Query: 540 YLPXPPXXXPPPXPPPXPPPXXPPXXPRGXXXXXXXXXXQXGS--PXXPXXHFXXTXAPT 713
++P PP P P PP P G + G P P H P
Sbjct: 206 HMPPPPMHHKPGEHMPPPPMHHEP----GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 261
Query: 714 PPXXMPXXXXRXPRPTXPXXXXPXSPPP 797
PP P P PPP
Sbjct: 262 PPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/64 (26%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = +1
Query: 571 PPXXPPXPPPXXPXXXPGAPRISPFTSRXNXAPPXXPQXTLXXLXPXXP-PXQCXPQXXV 747
P PP PP P AP + + + APP + P P P V
Sbjct: 191 PSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKFPNRGPSIPSASV 250
Query: 748 XPXP 759
P P
Sbjct: 251 PPVP 254
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,678,290
Number of Sequences: 5004
Number of extensions: 51184
Number of successful extensions: 487
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 299
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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