Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_J24
         (909 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061439-1|AAL28987.1|  183|Drosophila melanogaster LD37169p pro...    91   2e-18
AE014298-2885|AAF48980.1|  183|Drosophila melanogaster CG14207-P...    91   2e-18
AE014298-2884|AAN09508.1|  192|Drosophila melanogaster CG14207-P...    91   2e-18
AE014134-2607|AAF53466.1|  385|Drosophila melanogaster CG15256-P...    30   3.8  

>AY061439-1|AAL28987.1|  183|Drosophila melanogaster LD37169p
           protein.
          Length = 183

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 44/57 (77%), Positives = 51/57 (89%)
 Frame = +3

Query: 192 MADSGLKRNIPIKLGDFSVIDTEFSSIRERFDAXMRKMEEEMSKFRSQLMNXESNNF 362
           MA++  KRNIPIKLGDFSVIDTEFS+IRERFD+ MRKMEEEM+KFR +LMN E+N F
Sbjct: 1   MAEAN-KRNIPIKLGDFSVIDTEFSNIRERFDSEMRKMEEEMAKFRHELMNREANFF 56


>AE014298-2885|AAF48980.1|  183|Drosophila melanogaster CG14207-PA,
           isoform A protein.
          Length = 183

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 44/57 (77%), Positives = 51/57 (89%)
 Frame = +3

Query: 192 MADSGLKRNIPIKLGDFSVIDTEFSSIRERFDAXMRKMEEEMSKFRSQLMNXESNNF 362
           MA++  KRNIPIKLGDFSVIDTEFS+IRERFD+ MRKMEEEM+KFR +LMN E+N F
Sbjct: 1   MAEAN-KRNIPIKLGDFSVIDTEFSNIRERFDSEMRKMEEEMAKFRHELMNREANFF 56


>AE014298-2884|AAN09508.1|  192|Drosophila melanogaster CG14207-PB,
           isoform B protein.
          Length = 192

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 44/57 (77%), Positives = 51/57 (89%)
 Frame = +3

Query: 192 MADSGLKRNIPIKLGDFSVIDTEFSSIRERFDAXMRKMEEEMSKFRSQLMNXESNNF 362
           MA++  KRNIPIKLGDFSVIDTEFS+IRERFD+ MRKMEEEM+KFR +LMN E+N F
Sbjct: 1   MAEAN-KRNIPIKLGDFSVIDTEFSNIRERFDSEMRKMEEEMAKFRHELMNREANFF 56


>AE014134-2607|AAF53466.1|  385|Drosophila melanogaster CG15256-PA
           protein.
          Length = 385

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 16/66 (24%), Positives = 33/66 (50%)
 Frame = +2

Query: 17  RPHY*WNSLRFWSLQWTTNDQYCLVSRRVRIIPVKRVYARTFQCLFSFYNFHAANNVKNG 196
           +PH  W    F+ LQ T  +++ L+ + +    + R++ +   C  SF+  H  N ++ G
Sbjct: 194 QPHQHWQ--HFYELQTTLYNEFLLLHKLIN--DMSRLHNQVNFCQASFHCEHLQNGIQMG 249

Query: 197 *QWSQE 214
             W ++
Sbjct: 250 EGWGKD 255


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,949,327
Number of Sequences: 53049
Number of extensions: 420234
Number of successful extensions: 5574
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4810
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)