Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_J18
(897 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 31 0.85
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 31 1.1
Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical pr... 31 1.5
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 30 2.0
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 30 2.6
AL023858-2|CAE18058.1| 158|Caenorhabditis elegans Hypothetical ... 30 2.6
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 29 4.5
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 6.0
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.0
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 29 6.0
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 29 6.0
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 6.0
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 31.5 bits (68), Expect = 0.85
Identities = 26/90 (28%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Frame = -1
Query: 894 GXXG*GXGGSGVXXGGFXXEXXPXLGAXXXXXXRXXKYXXXGGAYGGRPXXLPXKGEKRX 715
G G G GGSG GG+ + A + G +GG G+
Sbjct: 77 GSGGAGAGGSGSGSGGWGGQDGGS-SAGGWGGSQGGSQGGSSGGWGGSSRSDSGSGQGGW 135
Query: 714 GTGYSR*SGAGF--GEQXGRNEGXFQGGNG 631
G S AG G Q G+N G +GG+G
Sbjct: 136 GGQQGGNSNAGGWGGSQGGQNGGGGRGGSG 165
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 729 GEKRXGTGYSR*SGAGFGEQXGRNEGXFQGGNG 631
G+ R G GY G G G++ G + +QGG+G
Sbjct: 562 GDMRSGGGYRGRGGRGNGQRFGGRDHRYQGGSG 594
>Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical
protein F33A8.3 protein.
Length = 208
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -2
Query: 794 GXENTXXGGEXMEEGPXXFXRKGRKGXEQGIPGKAGQGSGNRXG 663
G T GGE R GR G +G G+ G+G G R G
Sbjct: 158 GGGRTNSGGEETARDTDGGERGGRGGGRRGGRGRGGRGRGGRGG 201
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/88 (28%), Positives = 29/88 (32%)
Frame = -1
Query: 894 GXXG*GXGGSGVXXGGFXXEXXPXLGAXXXXXXRXXKYXXXGGAYGGRPXXLPXKGEKRX 715
G G G GG GGF + G + GG GG G
Sbjct: 72 GFNGGGRGGGRGGNGGFG-DNGGLRGGNGGGRGGNGGFDDNGGGRGGNGGGRGGTGGFGD 130
Query: 714 GTGYSR*SGAGFGEQXGRNEGXFQGGNG 631
G +G G G G N G +GGNG
Sbjct: 131 NGGGRGGNGGGRGGNGGGNNGGGRGGNG 158
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = -1
Query: 771 GGAYGGRPXXLPXKGEKRXGTGYSR*SGAGFGEQXGRNEGXFQGGNG 631
GG YGG +G R G+ YS G+G G + G G GG G
Sbjct: 281 GGGYGGDRDRGGDRGGDRGGSRYSTGGGSGGGYRSG---GGSSGGGG 324
>AL023858-2|CAE18058.1| 158|Caenorhabditis elegans Hypothetical
protein ZK285.2 protein.
Length = 158
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/57 (29%), Positives = 21/57 (36%)
Frame = -2
Query: 788 ENTXXGGEXMEEGPXXFXRKGRKGXEQGIPGKAGQGSGNRXGXTREXSRGETAWYVY 618
+++ GE G G G G G G GSGN R R +T Y Y
Sbjct: 76 DSSSGSGEGKSGGGGGAGGAGGAGGAGGAGGSGGSGSGNGMKFNRSKKRKDTKCYEY 132
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -1
Query: 771 GGAYGGRPXXLPXKGEKRXGTGYSR*SGAGFGEQXGRNEGXFQGG 637
GG GGR +G + G G R G G G G F GG
Sbjct: 97 GGGRGGRGGNFGDRGGRGRGAGGFRRGGEGGRFNEGERRGGFGGG 141
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 9/65 (13%)
Frame = +2
Query: 605 PDTDYKHTRPFPPWXXPSXRPXCSPNPAPLYREYP---------VPXLFSPFXGSXXGLP 757
P T + +P P P P +P P Y YP P F+P G+ G P
Sbjct: 701 PPTSVQPPQPQQPPQGPPGPPGPQQHPGP-YPGYPGYGPPGAMRPPAGFAPPPGAPYGYP 759
Query: 758 PXAPP 772
P APP
Sbjct: 760 PGAPP 764
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +2
Query: 629 RPFPPWXXPSXRPXCSPNPAPLYREYPVPXLFSPFXGSXXGLPPXAPP 772
+P PP P SP PA + + P P P + +PP PP
Sbjct: 464 KPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPI-ATPSSVPPPPPP 510
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical protein
R08B4.1b protein.
Length = 1160
Score = 28.7 bits (61), Expect = 6.0
Identities = 27/91 (29%), Positives = 29/91 (31%), Gaps = 3/91 (3%)
Frame = -1
Query: 894 GXXG*GXGGSGVXXGGFXXEXXPXLGAXXXXXXRXXKYXXXGGAYGGRPXXLPXKGEKRX 715
G G G GGSG GG G GG GG G+
Sbjct: 788 GGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNG 847
Query: 714 GTGYSR*SGAGFGEQXGRNEGXFQG---GNG 631
G G +GAG G G G G GNG
Sbjct: 848 GAGAGNGNGAGAGNGNGAGAGNGNGAGAGNG 878
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +2
Query: 629 RPFPPWXXPSXRPXCSPNPAPLYREYPVPXLFSPFXGSXXGLPPXAPP 772
+P PP P SP PA + + P P P + +PP PP
Sbjct: 471 KPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPI-ATPSSVPPPPPP 517
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 28.7 bits (61), Expect = 6.0
Identities = 24/86 (27%), Positives = 28/86 (32%)
Frame = +2
Query: 515 KRPXCWRFSIGSAPPXEHHQNRRLXSEVAXPDTDYKHTRPFPPWXXPSXRPXCSPNPAPL 694
K P F APP +H + V P + S P P P P
Sbjct: 1179 KSPGAAIFGAPGAPP-QHQGSFGAQFGVPPPQNSAPGAQFGAKPEASSHAPTPPPQPHPS 1237
Query: 695 YREYPVPXLFSPFXGSXXGLPPXAPP 772
Y+ P S F S G P APP
Sbjct: 1238 YQAPAPPPALSVFQHSPQGAPITAPP 1263
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 28.7 bits (61), Expect = 6.0
Identities = 24/86 (27%), Positives = 28/86 (32%)
Frame = +2
Query: 515 KRPXCWRFSIGSAPPXEHHQNRRLXSEVAXPDTDYKHTRPFPPWXXPSXRPXCSPNPAPL 694
K P F APP +H + V P + S P P P P
Sbjct: 1199 KSPGAAIFGAPGAPP-QHQGSFGAQFGVPPPQNSAPGAQFGAKPEASSHAPTPPPQPHPS 1257
Query: 695 YREYPVPXLFSPFXGSXXGLPPXAPP 772
Y+ P S F S G P APP
Sbjct: 1258 YQAPAPPPALSVFQHSPQGAPITAPP 1283
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 4/48 (8%)
Frame = +2
Query: 554 PPXEHHQNRRLXSEVAXPDTDYKHTRPFPP----WXXPSXRPXCSPNP 685
PP HH + R S + RPFPP P P C P P
Sbjct: 399 PPHHHHHDGRSPSRHGHHHHHHHGCRPFPPHHGHHHFPPFWPPCPPPP 446
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,856,481
Number of Sequences: 27780
Number of extensions: 302619
Number of successful extensions: 915
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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