Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_J16
(873 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 50 3e-06
U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin fam... 39 0.004
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 39 0.004
Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein. 37 0.022
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 36 0.029
U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin fam... 35 0.066
Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical pr... 35 0.087
AC087079-1|AAK27872.1| 402|Caenorhabditis elegans Hypothetical ... 32 0.62
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 31 0.81
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 31 0.81
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 31 1.4
U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin fam... 31 1.4
AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical ... 31 1.4
AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical ... 31 1.4
AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical ... 31 1.4
Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 3.3
U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical pr... 29 4.3
AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical ... 29 4.3
Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 5.7
AL031635-1|CAA21039.2| 487|Caenorhabditis elegans Hypothetical ... 28 7.6
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 49.6 bits (113), Expect = 3e-06
Identities = 19/46 (41%), Positives = 32/46 (69%)
Frame = +1
Query: 268 VKDLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYA 405
V D+L P + +V+G++ ++ FLGCCGAIRE++C+ V++A
Sbjct: 41 VLDILGDERLATPILLLVIGSLCTLLGFLGCCGAIRENYCLTVSFA 86
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 581 FECCGNTGAINYGPVHVCPESCC 649
FECCG T + ++ P+SCC
Sbjct: 142 FECCGVTNSSDWLTFTTIPDSCC 164
>U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin family
protein 9 protein.
Length = 233
Score = 39.1 bits (87), Expect = 0.004
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +1
Query: 307 WIFIVVGAVMFVIAFLGCCGAIRES 381
WI + VGA++F++ F GCCGA ES
Sbjct: 69 WILVAVGALLFLVGFFGCCGAGCES 93
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 307 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYA 405
+I IV+GAVM V+A LGCCG S ++ Y+
Sbjct: 115 YIIIVLGAVMMVVAMLGCCGITGRSRPFLIIYS 147
>Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein.
Length = 395
Score = 36.7 bits (81), Expect = 0.022
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 307 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYA 405
+I IV+GAVM V+A GCCG S ++ Y+
Sbjct: 226 YIXIVLGAVMMVVAMXGCCGITGRSRPFLIIYS 258
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 36.3 bits (80), Expect = 0.029
Identities = 37/120 (30%), Positives = 44/120 (36%), Gaps = 2/120 (1%)
Frame = -2
Query: 503 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ--*LSRIAPQHPKNAITNIT 330
PTPS M S +P + T T TM T TTM+ + P K+ T T
Sbjct: 153 PTPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 212
Query: 329 APTTMKIHGPTARWVFSKSLTMVQFIRNATPIPTSSRPRSATTRLKKNSTYFTKLVPHPM 150
PTTMK T + T TP S P + TT ST T P M
Sbjct: 213 TPTTMKSTPTTPTTPTTMKSTPT---TPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 269
Score = 29.1 bits (62), Expect = 4.3
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Frame = -2
Query: 515 LNDTPT-PSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAIT 339
+ TPT P+ ++ +P T T TM T TTM+ + P K+ T
Sbjct: 357 MKSTPTTPTTPTTMKSTP----TTPTTPTTMKSTPTTPTTPTTMK-STPTTPTTMKSTPT 411
Query: 338 NITAPTTMKIHGPTARWVFSKSLTMVQFIRNATPIPTSSRPRSAT 204
T PTTMK PT + T ++++ PT+ + S T
Sbjct: 412 TPTTPTTMK-STPTTPTTMKSTPTTPSTMKSSPTTPTTMKTSSIT 455
Score = 28.3 bits (60), Expect = 7.6
Identities = 35/123 (28%), Positives = 45/123 (36%), Gaps = 1/123 (0%)
Frame = -2
Query: 515 LNDTPT-PSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAIT 339
+ TPT P+ ++ +P T T TM T TTM+ + P K+ T
Sbjct: 243 MKSTPTTPTTPTTMKSTP----TTPTTPTTMKSTPTTPTTPTTMK-STPTTPTTMKSTPT 297
Query: 338 NITAPTTMKIHGPTARWVFSKSLTMVQFIRNATPIPTSSRPRSATTRLKKNSTYFTKLVP 159
T PTTMK T + T TP S P + TT ST T P
Sbjct: 298 TPTTPTTMKSTPTTPTTPTTMKSTPT---TPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 354
Query: 158 HPM 150
M
Sbjct: 355 TTM 357
>U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin family
protein 11 protein.
Length = 317
Score = 35.1 bits (77), Expect = 0.066
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 307 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYA 405
++ V G ++ V+AFLGCCGA +E ++ Y+
Sbjct: 84 YLLFVGGFIVIVVAFLGCCGAAKEWRPLLCCYS 116
>Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical
protein T14G10.6 protein.
Length = 308
Score = 34.7 bits (76), Expect = 0.087
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 307 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYA 405
W ++VG + F+I F GC G++RE+ + Y+
Sbjct: 86 WPLLIVGFLTFIIGFSGCVGSLRENTSFLTFYS 118
>AC087079-1|AAK27872.1| 402|Caenorhabditis elegans Hypothetical
protein Y37E3.1 protein.
Length = 402
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -2
Query: 344 ITNITAPTTMKIHGPTARWVFSKSLTMVQFIRNATPIPTSSRPRS-ATTRLK 192
I N+T P+ +IH + +W+ + T Q +N P+P S R+ A+T+ K
Sbjct: 353 IKNLTIPSDPEIHVDSVKWI--RVATPTQMKKNGVPLPESVLARAVASTQTK 402
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 31.5 bits (68), Expect = 0.81
Identities = 26/100 (26%), Positives = 44/100 (44%)
Frame = -2
Query: 503 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAP 324
PTP+ M + SP K ++TT T IA TT +S + + ++ ++
Sbjct: 353 PTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTPMIS-LTTESMQSTTSSSEIS 411
Query: 323 TTMKIHGPTARWVFSKSLTMVQFIRNATPIPTSSRPRSAT 204
TT+ T ++S+T + TP+ SS P +T
Sbjct: 412 TTLDSSSTTGSVSSTESVTS-DSSDSTTPLDVSSSPSEST 450
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 31.5 bits (68), Expect = 0.81
Identities = 26/100 (26%), Positives = 44/100 (44%)
Frame = -2
Query: 503 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAP 324
PTP+ M + SP K ++TT T IA TT +S + + ++ ++
Sbjct: 353 PTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTPMIS-LTTESMQSTTSSSEIS 411
Query: 323 TTMKIHGPTARWVFSKSLTMVQFIRNATPIPTSSRPRSAT 204
TT+ T ++S+T + TP+ SS P +T
Sbjct: 412 TTLDSSSTTGSVSSTESVTS-DSSDSTTPLDVSSSPSEST 450
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 31.5 bits (68), Expect = 0.81
Identities = 26/100 (26%), Positives = 44/100 (44%)
Frame = -2
Query: 503 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAP 324
PTP+ M + SP K ++TT T IA TT +S + + ++ ++
Sbjct: 353 PTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTPMIS-LTTESMQSTTSSSEIS 411
Query: 323 TTMKIHGPTARWVFSKSLTMVQFIRNATPIPTSSRPRSAT 204
TT+ T ++S+T + TP+ SS P +T
Sbjct: 412 TTLDSSSTTGSVSSTESVTS-DSSDSTTPLDVSSSPSEST 450
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 31.5 bits (68), Expect = 0.81
Identities = 26/100 (26%), Positives = 44/100 (44%)
Frame = -2
Query: 503 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAP 324
PTP+ M + SP K ++TT T IA TT +S + + ++ ++
Sbjct: 353 PTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTPMIS-LTTESMQSTTSSSEIS 411
Query: 323 TTMKIHGPTARWVFSKSLTMVQFIRNATPIPTSSRPRSAT 204
TT+ T ++S+T + TP+ SS P +T
Sbjct: 412 TTLDSSSTTGSVSSTESVTS-DSSDSTTPLDVSSSPSEST 450
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 585 NAAVTLALSTTGQFTFAPSPVASTKSILSNLRPATNXPSTPANSRL 722
N+A S+ G F AP P A + + + PAT +T A S L
Sbjct: 235 NSAPAATASSGGLFGAAPKPAAPSGGLFGSTAPATTAATTTATSGL 280
>U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin family
protein 17 protein.
Length = 243
Score = 30.7 bits (66), Expect = 1.4
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +1
Query: 292 LAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTY 402
L ++ +V G ++ FLG CGA+ S +++ +
Sbjct: 23 LKASAYVSLVCGCAQLLVGFLGLCGAVNRSRFLLLAF 59
>AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical
protein M01B12.4b protein.
Length = 644
Score = 30.7 bits (66), Expect = 1.4
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = -2
Query: 401 YVTTMQ*LSRIAPQHPKNAITN---ITAPTTMKIHGPTARWVFSKSLTMVQFIRNATPIP 231
YVT+ +R A K A + + T ++ PT+R S LTM Q R A+
Sbjct: 180 YVTSSAPSTRQAKSISKPAAVTTKKVGSMMTQSVYTPTSRPATSSRLTMKQPARGAS--T 237
Query: 230 TSSRPRSATTRLKKNSTYFTKLVPHPMLRALFF 132
+++RP +AT N + P PM R L F
Sbjct: 238 SAARPNTATPSSSNNRRSMDQRKP-PMPRKLPF 269
>AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical
protein M01B12.4c protein.
Length = 678
Score = 30.7 bits (66), Expect = 1.4
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = -2
Query: 401 YVTTMQ*LSRIAPQHPKNAITN---ITAPTTMKIHGPTARWVFSKSLTMVQFIRNATPIP 231
YVT+ +R A K A + + T ++ PT+R S LTM Q R A+
Sbjct: 170 YVTSSAPSTRQAKSISKPAAVTTKKVGSMMTQSVYTPTSRPATSSRLTMKQPARGAS--T 227
Query: 230 TSSRPRSATTRLKKNSTYFTKLVPHPMLRALFF 132
+++RP +AT N + P PM R L F
Sbjct: 228 SAARPNTATPSSSNNRRSMDQRKP-PMPRKLPF 259
>AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical
protein M01B12.4a protein.
Length = 634
Score = 30.7 bits (66), Expect = 1.4
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = -2
Query: 401 YVTTMQ*LSRIAPQHPKNAITN---ITAPTTMKIHGPTARWVFSKSLTMVQFIRNATPIP 231
YVT+ +R A K A + + T ++ PT+R S LTM Q R A+
Sbjct: 170 YVTSSAPSTRQAKSISKPAAVTTKKVGSMMTQSVYTPTSRPATSSRLTMKQPARGAS--T 227
Query: 230 TSSRPRSATTRLKKNSTYFTKLVPHPMLRALFF 132
+++RP +AT N + P PM R L F
Sbjct: 228 SAARPNTATPSSSNNRRSMDQRKP-PMPRKLPF 259
>Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical
protein F35E12.7a protein.
Length = 739
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 567 IANDSSNAAVTLALSTTGQFTFAPSPVASTKSILS-NLRPATNXPSTPA 710
IA S+ +T +L TT T SP+ TKS L+ P + PST A
Sbjct: 587 IATPSTKTPITPSLITTRSSTTKLSPIVITKSSLAYTATPTSAAPSTSA 635
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 29.9 bits (64), Expect = 2.5
Identities = 8/32 (25%), Positives = 18/32 (56%)
Frame = +1
Query: 307 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTY 402
W + GA++ ++ + GC GA + + C + +
Sbjct: 58 WFLVGAGAIIILVGYFGCIGAWKMNQCALAFF 89
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +3
Query: 690 NXPSTPANSR--LPAPXIGXLYXKWNQ-PIXRGCPPXXLCXGXRTPFPP 827
N P+ P+ ++ +P P +G W P RG PP + G P PP
Sbjct: 1423 NVPTPPSQNQYSMPPPVMGGHEGSWRGGPPMRGMPPLGMMRGRGGPPPP 1471
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Frame = +3
Query: 642 PVASTKSILSNLRPATNXPSTPANSRL--PAPXIGXLYXKWNQPIXRGCPPXXLCXGXRT 815
P+++ S S P T P+ P SR+ P+P + P PP
Sbjct: 454 PISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPP 513
Query: 816 PFPPSSPIPXKLDXXV--PP 869
P PP P P L+ + PP
Sbjct: 514 PPPPPPPPPPALEQEISGPP 533
>U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical
protein F01G12.1 protein.
Length = 178
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -1
Query: 594 PQHSNCRLQFRENSLGGXVCVSVRSLFE*HADAIHNALLDALAVGEEEDADHHLHN-DDH 418
P H + L +E SL + SVR+ E H + LD + DHH+HN ++H
Sbjct: 50 PPH-DLTLNHKEESLYDMLVASVRAGRESHFELDQ---LDVHTETNQSGHDHHIHNNEEH 105
Query: 417 QQKDCVRDDH 388
+ + DH
Sbjct: 106 KHHNMRSHDH 115
>AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical
protein Y39E4B.4 protein.
Length = 223
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 268 VKDLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTY 402
VK ++T + V WI I +I F+G GA+ S ++ Y
Sbjct: 59 VKSDIRTGIIVSFWIIIGFAIANVIIGFVGVIGAVIRSKYLLAPY 103
>Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical
protein T28F3.3 protein.
Length = 393
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 456 EEDADHHLHNDDHQQKDCVRDDH 388
EE DHH H+ DH + +R +H
Sbjct: 45 EELHDHHEHDHDHHDEQLIRKNH 67
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.7 bits (61), Expect = 5.7
Identities = 27/118 (22%), Positives = 39/118 (33%)
Frame = -2
Query: 506 TPTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITA 327
T TP+ + +P T TT T T+ + T + + P T T
Sbjct: 75 TTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPT---TTTTT 131
Query: 326 PTTMKIHGPTARWVFSKSLTMVQFIRNATPIPTSSRPRSATTRLKKNSTYFTKLVPHP 153
PTT T + T TP T++ P + TT +T T P
Sbjct: 132 PTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTP 189
>AL031635-1|CAA21039.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.1 protein.
Length = 487
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 309 DLHSRRGCNVRDRVLGMLWSDTRE-SLHGRHVRNLFAGD 422
D R+ N R +LG W D RE ++ GR F GD
Sbjct: 9 DTFLRKDINTRQIILGSFWRDEREQNVDGRFAVIHFLGD 47
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/71 (28%), Positives = 26/71 (36%)
Frame = +3
Query: 615 TGQFTFAPSPVASTKSILSNLRPATNXPSTPANSRLPAPXIGXLYXKWNQPIXRGCPPXX 794
TG+ T P+P A ++ + P TN PS N G L P G PP
Sbjct: 331 TGRKTLMPTPQAPFQNAPA---PFTNGPSDDVNRPFQTGPPGNLGRNGPPPFQAGVPPPV 387
Query: 795 LCXGXRTPFPP 827
+ P P
Sbjct: 388 IQNNMGRPIAP 398
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,490,733
Number of Sequences: 27780
Number of extensions: 342436
Number of successful extensions: 1218
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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