SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_J14
         (856 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC150514-1|AAI50515.1|  158|Homo sapiens MARCH-XI protein protein.     36   0.14 
BC150513-1|AAI50514.1|  158|Homo sapiens MARCH-XI protein protein.     36   0.14 
Z22936-1|CAA80523.1|  686|Homo sapiens TAP2E protein.                  31   7.1  
Z22935-1|CAA80522.1|  703|Homo sapiens TAP2B protein.                  31   7.1  
X87344-8|CAA60788.1|  686|Homo sapiens TAP2 protein.                   31   7.1  
X66401-4|CAA47027.1|  686|Homo sapiens TAP2 protein.                   31   7.1  
U07844-1|AAA79901.1|  622|Homo sapiens ABC transport protein pro...    31   7.1  
M74447-1|AAA59841.1|  703|Homo sapiens PSF-2 protein.                  31   7.1  
BX682530-5|CAI41936.1|  653|Homo sapiens transporter 2 ATP-bindi...    31   7.1  
BX682530-4|CAI41935.1|  703|Homo sapiens transporter 2 ATP-bindi...    31   7.1  
BX296564-5|CAI41937.1|  653|Homo sapiens transporter 2 ATP-bindi...    31   7.1  
BT009906-1|AAP88908.1|  686|Homo sapiens transporter 2, ATP-bind...    31   7.1  
AY007425-1|AAG12163.1|  109|Homo sapiens TAP2 protein protein.         31   7.1  
AL935043-2|CAI18622.1|  686|Homo sapiens transporter 2, ATP-bind...    31   7.1  
AL935043-1|CAI18621.1|  653|Homo sapiens transporter 2, ATP-bind...    31   7.1  
AL671681-8|CAI17711.1|  686|Homo sapiens transporter 2, ATP-bind...    31   7.1  
AL671681-7|CAI17710.1|  653|Homo sapiens transporter 2, ATP-bind...    31   7.1  
AL669918-4|CAI18137.1|  686|Homo sapiens transporter 2, ATP-bind...    31   7.1  
AL669918-3|CAI18136.1|  653|Homo sapiens transporter 2, ATP-bind...    31   7.1  
AL355001-3|CAI16181.1|  208|Homo sapiens zinc finger, MYM-type 5...    31   7.1  
AL355001-2|CAI16180.1|  382|Homo sapiens zinc finger, MYM-type 5...    31   7.1  
AK222823-1|BAD96543.1|  703|Homo sapiens transporter 2, ATP-bind...    31   7.1  
AJ133355-1|CAB57265.1|  213|Homo sapiens ZNF237 protein protein.       31   7.1  
AJ133354-1|CAB57264.1|  213|Homo sapiens ZNF237 protein protein.       31   7.1  
AJ133353-1|CAB57263.1|  208|Homo sapiens ZNF237 protein protein.       31   7.1  
AJ133352-1|CAB57262.1|  382|Homo sapiens ZNF237 protein protein.       31   7.1  
AF176984-1|AAD50509.1|  372|Homo sapiens TAP2 protein protein.         31   7.1  
AF105151-1|AAD12059.1|  653|Homo sapiens Tap2 transporter isofor...    31   7.1  
AF078671-1|AAD31384.1|  653|Homo sapiens transporter 2 isoform p...    31   7.1  
AB208953-1|BAD92190.1|  704|Homo sapiens transporter 2, ATP-bind...    31   7.1  
AB073779-1|BAB71769.1|  703|Homo sapiens ABC-transporter protein.      31   7.1  
AF136750-1|AAD23601.1|  483|Homo sapiens TAP2 protein protein.         30   9.3  
AF100418-1|AAD23381.1|  483|Homo sapiens TAP2 protein protein.         30   9.3  

>BC150514-1|AAI50515.1|  158|Homo sapiens MARCH-XI protein protein.
          Length = 158

 Score = 36.3 bits (80), Expect = 0.14
 Identities = 22/63 (34%), Positives = 30/63 (47%)
 Frame = -2

Query: 522 NYTETLELISQGRWRHSRCRCLWAPVTT*HQVSRQLVHPXKL*KKRFLLCGVVINQHCST 343
           NY +  ++    R   S  R LW P+T     +R LVHP +L   RF  CG V+    + 
Sbjct: 79  NYDKATDIEESSRGESSTSRTLWLPLTALR--NRNLVHPTQLTSPRF-QCGYVLLHLFNR 135

Query: 342 RRP 334
            RP
Sbjct: 136 MRP 138


>BC150513-1|AAI50514.1|  158|Homo sapiens MARCH-XI protein protein.
          Length = 158

 Score = 36.3 bits (80), Expect = 0.14
 Identities = 22/63 (34%), Positives = 30/63 (47%)
 Frame = -2

Query: 522 NYTETLELISQGRWRHSRCRCLWAPVTT*HQVSRQLVHPXKL*KKRFLLCGVVINQHCST 343
           NY +  ++    R   S  R LW P+T     +R LVHP +L   RF  CG V+    + 
Sbjct: 79  NYDKATDIEESSRGESSTSRTLWLPLTALR--NRNLVHPTQLTSPRF-QCGYVLLHLFNR 135

Query: 342 RRP 334
            RP
Sbjct: 136 MRP 138


>Z22936-1|CAA80523.1|  686|Homo sapiens TAP2E protein.
          Length = 686

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 327 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 376


>Z22935-1|CAA80522.1|  703|Homo sapiens TAP2B protein.
          Length = 703

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 327 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 376


>X87344-8|CAA60788.1|  686|Homo sapiens TAP2 protein.
          Length = 686

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 327 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 376


>X66401-4|CAA47027.1|  686|Homo sapiens TAP2 protein.
          Length = 686

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 327 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 376


>U07844-1|AAA79901.1|  622|Homo sapiens ABC transport protein
           protein.
          Length = 622

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 263 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 312


>M74447-1|AAA59841.1|  703|Homo sapiens PSF-2 protein.
          Length = 703

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 327 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 376


>BX682530-5|CAI41936.1|  653|Homo sapiens transporter 2 ATP-binding
           cassette sub-family B (MDR/TAP) protein.
          Length = 653

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 327 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 376


>BX682530-4|CAI41935.1|  703|Homo sapiens transporter 2 ATP-binding
           cassette sub-family B (MDR/TAP) protein.
          Length = 703

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 327 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 376


>BX296564-5|CAI41937.1|  653|Homo sapiens transporter 2 ATP-binding
           cassette sub-family B (MDR/TAP) protein.
          Length = 653

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 327 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 376


>BT009906-1|AAP88908.1|  686|Homo sapiens transporter 2, ATP-binding
           cassette, sub-family B (MDR/TAP) protein.
          Length = 686

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 327 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 376


>AY007425-1|AAG12163.1|  109|Homo sapiens TAP2 protein protein.
          Length = 109

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 12  RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 61


>AL935043-2|CAI18622.1|  686|Homo sapiens transporter 2, ATP-binding
           cassette, sub-family Bta protein.
          Length = 686

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 327 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 376


>AL935043-1|CAI18621.1|  653|Homo sapiens transporter 2, ATP-binding
           cassette, sub-family Budogene) protein.
          Length = 653

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 327 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 376


>AL671681-8|CAI17711.1|  686|Homo sapiens transporter 2, ATP-binding
           cassette, sub-family Bta 9 (pseudogene) protein.
          Length = 686

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 327 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 376


>AL671681-7|CAI17710.1|  653|Homo sapiens transporter 2, ATP-binding
           cassette, sub-family Bpha protein.
          Length = 653

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 327 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 376


>AL669918-4|CAI18137.1|  686|Homo sapiens transporter 2, ATP-binding
           cassette, sub-family Bunit 11 protein.
          Length = 686

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 327 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 376


>AL669918-3|CAI18136.1|  653|Homo sapiens transporter 2, ATP-binding
           cassette, sub-family Bunit 11 protein.
          Length = 653

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 327 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 376


>AL355001-3|CAI16181.1|  208|Homo sapiens zinc finger, MYM-type 5
           protein.
          Length = 208

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 410 THXSYKKKDSCYAEWSSTNTARRADRLNITTSGL 309
           T+   +KK SC+ EW    T  + + L+ +TS L
Sbjct: 127 TNGGAEKKSSCFIEWGLPGTKNKTNDLDFSTSSL 160


>AL355001-2|CAI16180.1|  382|Homo sapiens zinc finger, MYM-type 5
           protein.
          Length = 382

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 410 THXSYKKKDSCYAEWSSTNTARRADRLNITTSGL 309
           T+   +KK SC+ EW    T  + + L+ +TS L
Sbjct: 127 TNGGAEKKSSCFIEWGLPGTKNKTNDLDFSTSSL 160


>AK222823-1|BAD96543.1|  703|Homo sapiens transporter 2, ATP-binding
           cassette, sub-family B isoform 1 variant protein.
          Length = 703

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 327 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 376


>AJ133355-1|CAB57265.1|  213|Homo sapiens ZNF237 protein protein.
          Length = 213

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 410 THXSYKKKDSCYAEWSSTNTARRADRLNITTSGL 309
           T+   +KK SC+ EW    T  + + L+ +TS L
Sbjct: 127 TNGGAEKKSSCFIEWGLPGTKNKTNDLDFSTSSL 160


>AJ133354-1|CAB57264.1|  213|Homo sapiens ZNF237 protein protein.
          Length = 213

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 410 THXSYKKKDSCYAEWSSTNTARRADRLNITTSGL 309
           T+   +KK SC+ EW    T  + + L+ +TS L
Sbjct: 127 TNGGAEKKSSCFIEWGLPGTKNKTNDLDFSTSSL 160


>AJ133353-1|CAB57263.1|  208|Homo sapiens ZNF237 protein protein.
          Length = 208

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 410 THXSYKKKDSCYAEWSSTNTARRADRLNITTSGL 309
           T+   +KK SC+ EW    T  + + L+ +TS L
Sbjct: 127 TNGGAEKKSSCFIEWGLPGTKNKTNDLDFSTSSL 160


>AJ133352-1|CAB57262.1|  382|Homo sapiens ZNF237 protein protein.
          Length = 382

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 410 THXSYKKKDSCYAEWSSTNTARRADRLNITTSGL 309
           T+   +KK SC+ EW    T  + + L+ +TS L
Sbjct: 127 TNGGAEKKSSCFIEWGLPGTKNKTNDLDFSTSSL 160


>AF176984-1|AAD50509.1|  372|Homo sapiens TAP2 protein protein.
          Length = 372

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 12  RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 61


>AF105151-1|AAD12059.1|  653|Homo sapiens Tap2 transporter isoform
           protein.
          Length = 653

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 327 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 376


>AF078671-1|AAD31384.1|  653|Homo sapiens transporter 2 isoform
           protein.
          Length = 653

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 327 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 376


>AB208953-1|BAD92190.1|  704|Homo sapiens transporter 2, ATP-binding
           cassette, sub-family B isoform 1 variant protein.
          Length = 704

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 328 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 377


>AB073779-1|BAB71769.1|  703|Homo sapiens ABC-transporter protein.
          Length = 703

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 327 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERALY 376


>AF136750-1|AAD23601.1|  483|Homo sapiens TAP2 protein protein.
          Length = 483

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 124 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERTLY 173


>AF100418-1|AAD23381.1|  483|Homo sapiens TAP2 protein protein.
          Length = 483

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 606 RTGKYHRPAISGREAVMRFGLKGWGSRCNYTETLELISQGRWRHSRCRCLW 454
           R G+  R A+ G + V  FG +     C Y E LE   Q  WR    R L+
Sbjct: 124 RAGQVVREAVGGLQTVRSFGAEEH-EVCRYKEALEQCRQLYWRRDLERTLY 173


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,056,583
Number of Sequences: 237096
Number of extensions: 2494052
Number of successful extensions: 3261
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3261
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -