Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_J14
         (856 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64857-4|AAN84850.1|  356|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AL034364-2|CAA22252.1|  630|Caenorhabditis elegans Hypothetical ...    29   5.6  
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ...    28   9.7  

>U64857-4|AAN84850.1|  356|Caenorhabditis elegans Hypothetical
           protein C37C3.7 protein.
          Length = 356

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -2

Query: 540 GW-GSRCNYTETLELISQGRWRHSRCRCL 457
           GW G  C+Y    +  ++G W+  RC C+
Sbjct: 111 GWKGEMCDYRPAEKCGNKGEWKGDRCECV 139


>AL034364-2|CAA22252.1|  630|Caenorhabditis elegans Hypothetical
           protein W06D4.4 protein.
          Length = 630

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 338 LRVEQCWLMTTPHNKNLFFYSLXGWTS*RLTWC*VVTGAHRHLQRE 475
           L V+QCW     +++N  FY L  ++  R ++C  V G H  L R+
Sbjct: 297 LMVQQCWERVCIYSRNTNFYQLLFFSKSR-SYC--VCGLHSMLSRQ 339


>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical protein
            W02C12.1 protein.
          Length = 1372

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 665  PIYXQKCKPGFNGGRTSCESA 603
            P Y  +CKPG+ G  T C  A
Sbjct: 1177 PSYECRCKPGYRGNGTHCTDA 1197


>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
           potassium channelsprotein 2 protein.
          Length = 1564

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 514 SIVTTATPPLQAEAHYCFTARNSR 585
           S++T A PP+  E +YCF     R
Sbjct: 926 SMLTNAIPPIMVEDNYCFVVDGER 949


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,144,446
Number of Sequences: 27780
Number of extensions: 358414
Number of successful extensions: 697
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)