Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_J13
(863 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 34 0.15
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 34 0.15
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 33 0.20
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.46
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.46
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 32 0.46
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.80
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 31 1.1
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.4
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 1.9
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 30 1.9
AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical ... 30 1.9
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 30 2.4
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 2.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 3.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 3.2
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 29 3.2
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z81533-8|CAB04332.1| 917|Caenorhabditis elegans Hypothetical pr... 29 5.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.7
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 5.7
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 5.7
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 5.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.7
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 28 7.5
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 7.5
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 7.5
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 28 7.5
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 28 7.5
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z67736-2|CAA91535.1| 226|Caenorhabditis elegans Hypothetical pr... 28 9.9
U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical pr... 28 9.9
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 28 9.9
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 9.9
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 9.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 9.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 9.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 9.9
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 9.9
AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi dom... 28 9.9
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 787 GGXXXGXXXGEXGDWGXGGGXGGXPGXXGRXEXGXGXG 674
GG G G G WG GG G G G G G G
Sbjct: 58 GGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRG 95
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -2
Query: 760 GEXGDWGXGGGXGGXPGXXGRXEXGXGXG 674
G G WG G GG PG GR G G G
Sbjct: 38 GRSGGWGRPGWGGGGPG-WGRGGGGSGWG 65
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 641 PPXXXP-PPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTPXXP 814
PP P PPP +P P P + P P +P P+ P +P P TP P
Sbjct: 42 PPQYAPLPPPPMPAPAPAYNP--YPCANPPCIVVEPMPVAPPAPAPAYNPYPCATPPCP 98
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/67 (26%), Positives = 22/67 (32%), Gaps = 2/67 (2%)
Frame = +2
Query: 629 PYXGPPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTR--APIXGFPXXXSPXXTPXXQKT 802
P P PP + P P PA P +P P P+ P +P P
Sbjct: 58 PAYNPYPCANPPCIVVEPMPVAPPAPAPAYNPYPCATPPCPLPYIPEPVAPVPAPAPVYE 117
Query: 803 PXXPTAP 823
P AP
Sbjct: 118 PYACAAP 124
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/64 (29%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Frame = +2
Query: 629 PYXGPPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTP--XXQKT 802
PY P PPPP P P P + P S AP + +P P Q+
Sbjct: 127 PYQQQPPPPPPPPHYPPPPPHYPPPPPAPHSAYIDHSAPRPAYIEHSAPPPQPQYPQQQP 186
Query: 803 PXXP 814
P P
Sbjct: 187 PQYP 190
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = +2
Query: 641 PPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTPXXP 814
P PPPP P P PA P +P P P P P P P
Sbjct: 45 PQQTAPPPPPAPYPQQAV-PAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAP 101
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/50 (30%), Positives = 19/50 (38%)
Frame = +2
Query: 656 PPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTP 805
PPPP P P P + P+ + P AP +P P P P
Sbjct: 27 PPPPPPPKPAPYVEQSAQPQQTAPPPPPAP---YPQQAVPAPAPPPAPYP 73
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.46
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +2
Query: 641 PPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTPXXPTA 820
PP PPP P P P P P P + + P P TP P P
Sbjct: 261 PPVPPPPPSVTPMP-PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 319
Query: 821 P 823
P
Sbjct: 320 P 320
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.46
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +2
Query: 641 PPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTPXXPTA 820
PP PPP P P P P P P + + P P TP P P
Sbjct: 271 PPVPPPPPSVTPMP-PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 329
Query: 821 P 823
P
Sbjct: 330 P 330
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 787 GGXXXGXXXGEXGDW-GXGGGXGGXPGXXGRXEXGXGXGE 671
GG G G G+W G GGG G G G G G G+
Sbjct: 64 GGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGD 103
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -2
Query: 787 GGXXXGXXXGEXGDWGXGGGXGGXPGXXGRXEXG 686
GG G G GDWG G GG G GR + G
Sbjct: 74 GGGNWGGNGGGRGDWGGNG--GGGRGGGGRGDWG 105
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 787 GGXXXGXXXGEXGDWGXGGGXGGXPGXXGRXEXGXG 680
GG G G WG GGG GG G G G G
Sbjct: 43 GGGPGGWGNNGGGGWGRGGGRGG--GDWGGNNGGGG 76
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
Frame = -2
Query: 784 GXXXGXXXGEXGDWGXG----GGXGGXPGXXGRXEXGXGXG 674
G G G G+WG G GG GG G G G G G
Sbjct: 102 GDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRG 142
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 751 GDWGXGGGXGGXPGXXGRXEXGXG 680
GDWG GG GG G GR G G
Sbjct: 155 GDWGGNGG-GGRGGGGGRGGGGGG 177
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.80
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +2
Query: 641 PPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGF 757
PP PPPP P P P P P P + +P +
Sbjct: 52 PPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPCQSY 90
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 629 PYXGPPXXXPPPPXLPXPXPXFXPAXXPRXSPXP 730
P PP PPPP P P P P+ P S P
Sbjct: 60 PMCPPPPPPPPPPMCPPPPPPM-PSYSPCQSYAP 92
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/67 (31%), Positives = 24/67 (35%), Gaps = 5/67 (7%)
Frame = +2
Query: 638 GPPXXXPPPPXL--PXPXP-XFXPAXXPRXSPXP--XTRAPIXGFPXXXSPXXTPXXQKT 802
GPP PPPP + P P P P P+ P P P P P P +
Sbjct: 26 GPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYS 85
Query: 803 PXXPTAP 823
P AP
Sbjct: 86 PCQSYAP 92
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 3/62 (4%)
Frame = +2
Query: 629 PYXGPPXXXPPPPXLPXP---XPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQK 799
P PP PPP P P P F P P P P+ P P +P
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPCQSY 90
Query: 800 TP 805
P
Sbjct: 91 AP 92
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.5 bits (68), Expect = 0.80
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = +2
Query: 629 PYXGPPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTP 805
P P PPP +P P P PA + P P PI P P P P
Sbjct: 466 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPI-ATPSSVPPPPPPPPPPPP 523
>Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical
protein F41E7.5 protein.
Length = 112
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -2
Query: 742 GXGGGXGGXPGXXGRXEXGXGXG 674
G GGG GG PG GR G G G
Sbjct: 32 GGGGGFGGGPGQFGRGGFGGGPG 54
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -2
Query: 760 GEXGDWGXGGGXGGXPGXXGRXEXGXGXG 674
G G +G GG GG P GR G G G
Sbjct: 65 GGNGGFGGNGGFGGGPSYGGRGGFGGGPG 93
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = +2
Query: 629 PYXGPPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTPX 808
PY P P P P P P P+ P P + P P P P Q P
Sbjct: 2018 PYNPQPVVVQRPQFRPQPQPRPQPQPQPQPQPQPQPQQPYIQRPALTLPFQQP--QYPPP 2075
Query: 809 XPTAP 823
P P
Sbjct: 2076 IPFQP 2080
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/59 (30%), Positives = 21/59 (35%)
Frame = +2
Query: 629 PYXGPPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTP 805
PY PP PPPP P P P P P AP P +P ++ P
Sbjct: 82 PYV-PPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSPLVCCKQAP 139
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +2
Query: 629 PYXGPPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTP 787
P P PPP +P P P PA + P P PI P P P
Sbjct: 459 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPI-ATPSSVPPPPPP 510
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +2
Query: 641 PPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAP 745
PP PPP P P P P P P +AP
Sbjct: 177 PPPPRPPPQEPPKPVEQAAPPPPPAPMPVPVEKAP 211
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +2
Query: 644 PXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSP 775
P PPPP P P P P P ++AP G P P
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAP-TGVPLPVPP 1378
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +2
Query: 638 GPPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAP 745
GPP PP P P P P P P P TR P
Sbjct: 245 GPPGPPGPPTRRP-PGPPGPPTRRPPGPPGPPTRRP 279
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 5/43 (11%)
Frame = -2
Query: 787 GGXXXGXXXGEXGDWGXGGG-----XGGXPGXXGRXEXGXGXG 674
GG G G G WG GGG GG G G G G G
Sbjct: 219 GGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGG 261
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -2
Query: 784 GXXXGXXXGEXGDWGXGGGXGGXPGXXGRXEXGXGXG 674
G G + G WG GGG G G G G G G
Sbjct: 234 GGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGG 270
>AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical
protein Y47D3B.6 protein.
Length = 269
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +2
Query: 641 PPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTP 787
PP PP LP P PA P P P AP P +P P
Sbjct: 51 PPMMMAPPAPLPAYAPAPLPAYAPAPLPAPVFAAPAPA-PVFAAPFAAP 98
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 632 YXGPPXXXPPPPXLPXPXPXFXPAXXPRXSPXP 730
Y PP PPPP P P P P P P P
Sbjct: 95 YVPPP---PPPPTQPEPEPEPRPEPQPEPQPEP 124
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = +2
Query: 629 PYXGPPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTPX 808
P GPP P P P P P + P P AP G P P P P
Sbjct: 713 PPQGPPGP-PGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPYGYPPGAPPPAGFHPS 771
Query: 809 XPTAP 823
P P
Sbjct: 772 HPQHP 776
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/66 (28%), Positives = 22/66 (33%)
Frame = +2
Query: 626 FPYXGPPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTP 805
+PY G P PP P P A P + + P G P S P Q P
Sbjct: 811 YPYPGGPVPPGPPQNRMPPPPPAQGAPSPSGAAGSNGKQPRYGTPAPPSRASAPTPQ--P 868
Query: 806 XXPTAP 823
T P
Sbjct: 869 LSSTMP 874
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/68 (27%), Positives = 21/68 (30%), Gaps = 3/68 (4%)
Frame = +2
Query: 629 PYXGPPXXXP---PPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQK 799
P G P P PPP P P F A +P P P G P + P
Sbjct: 596 PNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 655
Query: 800 TPXXPTAP 823
P P
Sbjct: 656 PPSGAGGP 663
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/68 (27%), Positives = 21/68 (30%), Gaps = 3/68 (4%)
Frame = +2
Query: 629 PYXGPPXXXP---PPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQK 799
P G P P PPP P P F A +P P P G P + P
Sbjct: 422 PNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 481
Query: 800 TPXXPTAP 823
P P
Sbjct: 482 PPSGAGGP 489
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/60 (26%), Positives = 20/60 (33%)
Frame = +2
Query: 644 PXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTPXXPTAP 823
P P P +P P P P P P P ++ FP P P + P P
Sbjct: 130 PKPMPIPKPMPFPKPMLFPKPMPFPKPMPKSKPKSEPFP-NPMPFPKPMPKPKPKPKPMP 188
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/61 (29%), Positives = 21/61 (34%), Gaps = 5/61 (8%)
Frame = +2
Query: 656 PPPPXLPXPXPXFXPAXXPRXSPX--PXTRA---PIXGFPXXXSPXXTPXXQKTPXXPTA 820
PPP +P P P P P P P + P P +P P TP P
Sbjct: 153 PPPTPIPTPVPILEPPPPPPPVPPLSPLYKVLEIPATPSPIFVAPLPPPPAYTTPDVPPE 212
Query: 821 P 823
P
Sbjct: 213 P 213
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 629 PYXGPPXXXPPPPXLPXPXPXFXPA 703
P PP PPPP P P P P+
Sbjct: 350 PIISPPAPPPPPPPPPPPPPPQTPS 374
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 3/64 (4%)
Frame = +2
Query: 641 PPXXXPPPPXLPXPXPXFXPAXXP---RXSPXPXTRAPIXGFPXXXSPXXTPXXQKTPXX 811
P PPPP P P A P + P P T+AP P + P
Sbjct: 170 PTTEAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTNKEVTTVAPVPKPAPVT 229
Query: 812 PTAP 823
AP
Sbjct: 230 APAP 233
>Z81533-8|CAB04332.1| 917|Caenorhabditis elegans Hypothetical
protein F36G9.13 protein.
Length = 917
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +2
Query: 656 PPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKT 802
PPPP +P P P P P P + A S +P KT
Sbjct: 849 PPPPPVPTAPPAKTPETAPLLVPKPVSNAENDAAKPTESVKASPKDAKT 897
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 3/65 (4%)
Frame = +2
Query: 638 GPPXXXPP---PPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTPX 808
GPP PP PP P P P P P P P GF P P P
Sbjct: 741 GPPPPPPPGGLPPISGGPPP---PPPPPGGCPPPPPPPPPGGF-KGGPPPPPPPGMFAPM 796
Query: 809 XPTAP 823
P P
Sbjct: 797 APVIP 801
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 4/54 (7%)
Frame = +2
Query: 638 GPPXXXPPPPXLPXPXPXFXPA---XXPRXSPXPXTRAPIXG-FPXXXSPXXTP 787
GPP PPP P P P P P P P AP+ P P P
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 3/65 (4%)
Frame = +2
Query: 638 GPPXXXPP---PPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTPX 808
GPP PP PP P P P P S P P G P P K
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Query: 809 XPTAP 823
P P
Sbjct: 785 PPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 3/65 (4%)
Frame = +2
Query: 638 GPPXXXPP---PPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTPX 808
GPP PP PP P P P P P P P GF P P P
Sbjct: 741 GPPPPPPPGGLPPISGGPPP---PPPPPGGCPPPPPPPPPGGF-KGGPPPPPPPGMFAPM 796
Query: 809 XPTAP 823
P P
Sbjct: 797 APVIP 801
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 4/54 (7%)
Frame = +2
Query: 638 GPPXXXPPPPXLPXPXPXFXPA---XXPRXSPXPXTRAPIXG-FPXXXSPXXTP 787
GPP PPP P P P P P P P AP+ P P P
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 3/65 (4%)
Frame = +2
Query: 638 GPPXXXPP---PPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTPX 808
GPP PP PP P P P P S P P G P P K
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Query: 809 XPTAP 823
P P
Sbjct: 785 PPPPP 789
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/61 (27%), Positives = 20/61 (32%)
Frame = +2
Query: 641 PPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTPXXPTA 820
PP PPP L P P P P P + + G P P P + P
Sbjct: 94 PPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMS---LLGPPPFSVPPSVPPPTSSAAAPIV 150
Query: 821 P 823
P
Sbjct: 151 P 151
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/61 (27%), Positives = 20/61 (32%)
Frame = +2
Query: 641 PPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTPXXPTA 820
PP PPP L P P P P P + + G P P P + P
Sbjct: 117 PPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMS---LLGPPPFSVPPSVPPPTSSAAAPIV 173
Query: 821 P 823
P
Sbjct: 174 P 174
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/61 (27%), Positives = 20/61 (32%)
Frame = +2
Query: 641 PPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTPXXPTA 820
PP PPP L P P P P P + + G P P P + P
Sbjct: 367 PPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMS---LLGPPPFSVPPSVPPPTSSAAAPIV 423
Query: 821 P 823
P
Sbjct: 424 P 424
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 3/65 (4%)
Frame = +2
Query: 638 GPPXXXPP---PPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTPX 808
GPP PP PP P P P P P P P GF P P P
Sbjct: 324 GPPPPPPPGGLPPISGGPPP---PPPPPGGCPPPPPPPPPGGF-KGGPPPPPPPGMFAPM 379
Query: 809 XPTAP 823
P P
Sbjct: 380 APVIP 384
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 4/54 (7%)
Frame = +2
Query: 638 GPPXXXPPPPXLPXPXPXFXPA---XXPRXSPXPXTRAPIXG-FPXXXSPXXTP 787
GPP PPP P P P P P P P AP+ P P P
Sbjct: 340 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 393
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 3/65 (4%)
Frame = +2
Query: 638 GPPXXXPP---PPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTPX 808
GPP PP PP P P P P S P P G P P K
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 367
Query: 809 XPTAP 823
P P
Sbjct: 368 PPPPP 372
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 751 GDWGXGGGXGGXPGXXGRXEXGXG 680
G+W GGG GG G G G G
Sbjct: 43 GEWNNGGGRGGFGGNNGWNNGGGG 66
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 641 PPXXXPPPPXLPXPXPXFXPAXXPRXS 721
PP PPPP P P P P PR S
Sbjct: 67 PPPICPPPPPPPMPCPP-PPPPMPRPS 92
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 626 FPYXGPPXXXPPPPXLPXPXPXFXPAXXPRXSPXP 730
F + G PPPP P P P P+ P P P
Sbjct: 145 FSHHGATSSAPPPP--PPPPPVSVPSSKPTPPPPP 177
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 626 FPYXGPPXXXPPPPXLPXPXPXFXPAXXPRXSPXP 730
F + G PPPP P P P P+ P P P
Sbjct: 145 FSHHGATSSAPPPP--PPPPPVSVPSSKPTPPPPP 177
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = -3
Query: 786 GVXXGXXXXGXPXIGARVXGXGDXRGXXAGXKXGXGXGXSGGGGX-XXGGP 637
G G G P GA G +G G G G G GGGG GGP
Sbjct: 189 GGWGGPAQRGGP--GAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGP 237
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = -3
Query: 786 GVXXGXXXXGXPXIGARVXGXGDXRGXXAGXKXGXGXGXSGGGGX-XXGGP 637
G G G P GA G +G G G G G GGGG GGP
Sbjct: 227 GGWGGPAQRGGP--GAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGP 275
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/61 (29%), Positives = 21/61 (34%)
Frame = +2
Query: 641 PPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTPXXPTA 820
P P P P P P PA P +P P AP +P P + P A
Sbjct: 480 PAEPAPAPAPAPAPAPEAAPAPEPAPAPAP---APAPEAAPAAAPDAAP-AEPAPVPEVA 535
Query: 821 P 823
P
Sbjct: 536 P 536
>Z67736-2|CAA91535.1| 226|Caenorhabditis elegans Hypothetical
protein F57G12.2 protein.
Length = 226
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 656 PPPPXLPXPXPXFXPAXXPRXSPXPXTR 739
P P +P P P P PR + P TR
Sbjct: 108 PGPSMIPPPLPQMIPMGIPRHNSVPPTR 135
>U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical
protein F35A5.5 protein.
Length = 125
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 656 PPPPXLPXPXPXFXPAXXPRXSPXP 730
PPP +P P P PA P+ P P
Sbjct: 2 PPPIPIPIPAPVPVPAPVPQPVPVP 26
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +2
Query: 632 YXGPPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAP 745
+ GPP PP P P PA P S P + P
Sbjct: 145 FPGPPGPHRPPEHYPGPPRPQAPAAPPPKSLFPSAQKP 182
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +2
Query: 629 PYXGPPXXXPPPPXLPXPXPXFXPAXXP-RXSPXPXTRAPIXGFP 760
P PP PPP P P P P P P P P+ G P
Sbjct: 81 PLSNPPAKPTPPP--PPPKPTIRPPPIPASPPPRPPASEPV-GIP 122
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +2
Query: 629 PYXGPPXXXPPPPXLPXPXPXFXPAXXP-RXSPXPXTRAPIXGFP 760
P PP PPP P P P P P P P P+ G P
Sbjct: 303 PLSNPPAKPTPPP--PPPKPTIRPPPIPASPPPRPPASEPV-GIP 344
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +2
Query: 641 PPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTP 805
PP PPPP P P P SP P A P SP P P
Sbjct: 232 PPAGSPPPP----PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 282
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +2
Query: 641 PPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTP 805
PP PPPP P P P SP P A P SP P P
Sbjct: 253 PPAGSPPPP----PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 303
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +2
Query: 641 PPXXXPPPPXLPXPXPXFXPAXXPRXSPXPXTRAPIXGFPXXXSPXXTPXXQKTP 805
PP PPPP P P P SP P A P SP P P
Sbjct: 238 PPAGSPPPP----PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 288
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 748 DWGXGGGXGGXPGXXGRXEXGXGXG 674
D+G GGG GG G G G G G
Sbjct: 185 DFGPGGGGGGMGGGGGSGGSGGGSG 209
>AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi
domain-containing protein2 protein.
Length = 975
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 629 PYXGPPXXXPPPPXLPXPXP 688
P PP PPPP P P P
Sbjct: 21 PVTAPPGLHPPPPVPPVPVP 40
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,927,020
Number of Sequences: 27780
Number of extensions: 200177
Number of successful extensions: 1465
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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