Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_J06
(871 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC649.02 |rps1902|rps19-2, rps19|40S ribosomal protein S19|Sch... 104 1e-23
SPBC21C3.13 |rps1901|rps19-1|40S ribosomal protein S19|Schizosac... 104 1e-23
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 41 3e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 39 8e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.006
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.010
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.013
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.092
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.16
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.16
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.28
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.37
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 28 1.5
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 1.5
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 2.0
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 27 3.5
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 4.6
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 4.6
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 4.6
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 4.6
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 26 6.1
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 26 8.0
>SPBC649.02 |rps1902|rps19-2, rps19|40S ribosomal protein
S19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 143
Score = 104 bits (250), Expect = 1e-23
Identities = 46/85 (54%), Positives = 60/85 (70%)
Frame = +1
Query: 184 PEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 363
P+ +D+VKT KELAPYDPDW+YVR AAI RHIY+R VGV + K++GG G+ PS
Sbjct: 31 PQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPS 90
Query: 364 HFCRSSGSIARXALQSLEALKLVEK 438
H SGS+ R +QSLE + ++EK
Sbjct: 91 HHRDGSGSVQRKVVQSLEKIGVLEK 115
>SPBC21C3.13 |rps1901|rps19-1|40S ribosomal protein
S19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 144
Score = 104 bits (250), Expect = 1e-23
Identities = 46/85 (54%), Positives = 60/85 (70%)
Frame = +1
Query: 184 PEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 363
P+ +D+VKT KELAPYDPDW+YVR AAI RHIY+R VGV + K++GG G+ PS
Sbjct: 31 PQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPS 90
Query: 364 HFCRSSGSIARXALQSLEALKLVEK 438
H SGS+ R +QSLE + ++EK
Sbjct: 91 HHRDGSGSVQRKVVQSLEKIGVLEK 115
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 40.7 bits (91), Expect = 3e-04
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = +1
Query: 616 PPPPPXPPXXXPPPXPPXPPP 678
PPPPP PP PP PP PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 39.1 bits (87), Expect = 8e-04
Identities = 15/22 (68%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = +2
Query: 614 PPPPPXPPXXXXP--PPPPPPP 673
PPPPP PP P PPPPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 33.5 bits (73), Expect = 0.040
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 609 PXPPPPPXPPXXXPPPXPPXPP 674
P PPPP PP PP P PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPP 27
Score = 33.1 bits (72), Expect = 0.053
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = +3
Query: 609 PXPPPPPX--PPXXXPPPXPP 665
P PPPPP PP PPP PP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 32.7 bits (71), Expect = 0.070
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 609 PXPPPPPXPPXXXPPPXPPXPP 674
P PPPP PP PP PP PP
Sbjct: 9 PPPPPP--PPGFEPPSQPPPPP 28
Score = 30.3 bits (65), Expect = 0.37
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +2
Query: 632 PPXXXXPPPPPP---PPXXXXXPGPP 700
PP PPPPPP PP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 2/25 (8%)
Frame = +1
Query: 622 PPPXPPXXXPPPX--PPXPPPXXXP 690
PP PP PPP PP PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 636 PXXXPPPXPPXPPXXXXPRGPPXLXP 713
P PPP PP PP P PP P
Sbjct: 5 PPGNPPP-PPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 8.0
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 794 PGRPPXPXXXXGVXXXXXXXXPPPP 868
PG PP P G PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.1 bits (87), Expect = 8e-04
Identities = 15/22 (68%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = +2
Query: 614 PPPPPXPP--XXXXPPPPPPPP 673
PPPPP PP PPPPPPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPP 782
Score = 38.7 bits (86), Expect = 0.001
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +2
Query: 614 PPPPPXPPXXXXPPPPPPPPXXXXXPGPP 700
P PPP P PPPPPPP P PP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 37.1 bits (82), Expect = 0.003
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +3
Query: 609 PXPPPPPXPPXXXPPPXPPXP-PXXXXPRGPPXLXPLXXXGG 731
P P PPP P PPP PP P P PP P GG
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +1
Query: 616 PPPPPXPPXXXP--PPXPPXPPPXXXPGAPXXXXP 714
PPPPP PP PP PP PPP G P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAP 795
Score = 35.5 bits (78), Expect = 0.010
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +2
Query: 614 PPPPPXPPXXXXPPPPPPPPXXXXXPGPP 700
P P P P PPPPPPP GPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 32.7 bits (71), Expect = 0.070
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = +3
Query: 600 KXXPXPPPPPXPPXXXPPPXPPXPPXXXXPRGPPXLXPLXXXGGXXXXPRXXPSKXXPXF 779
K P PPP P P P P PP GPP P G P P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPI-PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Query: 780 GXXXXPXAP 806
G AP
Sbjct: 789 GSRYYAPAP 797
Score = 28.7 bits (61), Expect(2) = 0.024
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 590 KXLXXFXXPPPPPXPPXXXXPPPPPPPPXXXXXPGPP 700
K L PPPP P P P PP GPP
Sbjct: 726 KLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP 762
Score = 24.2 bits (50), Expect(2) = 0.024
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 797 GRPPXPXXXXGVXXXXXXXXPPPP 868
G PP P GV PPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.3 bits (80), Expect = 0.006
Identities = 25/77 (32%), Positives = 25/77 (32%), Gaps = 10/77 (12%)
Frame = +3
Query: 609 PXPPPPPXPPXXX--PPPX--------PPXPPXXXXPRGPPXLXPLXXXGGXXXXPRXXP 758
P PPPP P PPP PP PP R P L PL P P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 759 SKXXPXFGXXXXPXAPP 809
P P APP
Sbjct: 421 PSLPPSAPPSLPPSAPP 437
Score = 33.5 bits (73), Expect = 0.040
Identities = 20/69 (28%), Positives = 21/69 (30%)
Frame = +1
Query: 619 PPPPXPPXXXPPPXPPXPPPXXXPGAPXXXXPFXXXGGXWXXPAXTXLKXXPXSXXXXAR 798
P PP P PP PP PP GAP P P + P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAP--AAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 799 XPPXPPXXP 825
PP P P
Sbjct: 476 PPPAPAPAP 484
Score = 32.7 bits (71), Expect = 0.070
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = +3
Query: 633 PPXXXPPPXPPXPPXXXXPRGPPXLXPLXXXGGXXXXPRXXPSKXXPXFGXXXXPXAPPX 812
PP PP PP P P PP L P+ G P PS P APP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSL-PM----GAPAAPPLPPSAPIAPPLPAGMPAAPPL 469
Query: 813 P 815
P
Sbjct: 470 P 470
Score = 32.7 bits (71), Expect = 0.070
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +1
Query: 649 PPPXPPXPPPXXXPGAPXXXXPFXXXGGXWXXPAXTXLKXXPXSXXXXARXPPXPPXXP 825
P P PP PP P P P G P P PP PP P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 31.5 bits (68), Expect = 0.16
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +3
Query: 609 PXPPPPPXPPXXXPPPXPPXPPXXXXPRGPPXLXPL 716
P P PP PP PP PP P P G P PL
Sbjct: 416 PVPTPPSLPPSA-PPSLPPSAPPSL-PMGAPAAPPL 449
Score = 30.3 bits (65), Expect = 0.37
Identities = 24/84 (28%), Positives = 25/84 (29%), Gaps = 12/84 (14%)
Frame = +3
Query: 600 KXXPXPPPPPXPPXXXPPP----------XPPXPPXXXXPRGPPXLXPLXXXGGXXXXPR 749
K P PPPPP PP PP PP G L P PR
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Query: 750 XXPS--KXXPXFGXXXXPXAPPXP 815
PS + P PP P
Sbjct: 368 SAPSTGRQPPPLSSSRAVSNPPAP 391
Score = 29.1 bits (62), Expect = 0.86
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 617 PPPPXPPXXXXPPPPPPPPXXXXXPGPP 700
PPPP PP P PP P PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 29.1 bits (62), Expect = 0.86
Identities = 21/70 (30%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Frame = +3
Query: 609 PXPPP-PPXPPXXXPPPXPPXPPXXXXPRGP-PXLXPL--XXXGGXXXXPRXXPSKXXPX 776
P PP PP P PP PP P P P P+ G P P+ P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Query: 777 FGXXXXPXAP 806
P AP
Sbjct: 478 PAPAPAPAAP 487
Score = 28.7 bits (61), Expect = 1.1
Identities = 20/78 (25%), Positives = 23/78 (29%)
Frame = +1
Query: 583 PXKKXXXFXXXPPPPPXPPXXXPPPXPPXPPPXXXPGAPXXXXPFXXXGGXWXXPAXTXL 762
P ++ PPP PP PP PP P AP P P +
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSPPNSPP--RPIAPVSMNPAINSTSKPPLPPPSSR 298
Query: 763 KXXPXSXXXXARXPPXPP 816
R PP PP
Sbjct: 299 VSAAALAANKKRPPPPPP 316
Score = 28.7 bits (61), Expect = 1.1
Identities = 23/81 (28%), Positives = 24/81 (29%), Gaps = 12/81 (14%)
Frame = +3
Query: 609 PXPPPP--------PXPPXXXP-PPXPPXPPXXXXPRGPPXLXPLXXXGGXXXXPRXXPS 761
P PPPP P PP PP PP R PP L P P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
Query: 762 K---XXPXFGXXXXPXAPPXP 815
+ P G PP P
Sbjct: 398 RSAPALPPLGNASRTSTPPVP 418
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 614 PPPPPXPPXXXXPPPPPPP 670
P PP PP PPP P P
Sbjct: 464 PAAPPLPPAAPAPPPAPAP 482
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 614 PPPPPXPPXXXXPPPPPPPPXXXXXPGPP 700
PPPPP P P PP P PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 8/27 (29%)
Frame = +2
Query: 614 PPPP--------PXPPXXXXPPPPPPP 670
PPPP P PP PPPPPP
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 616 PPPPPXPPXXXPPPXPPXPPP 678
P PP PP PP P P P
Sbjct: 464 PAAPPLPPAAPAPPPAPAPAP 484
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 617 PPPPXPPXXXXPPPPPPPPXXXXXPGPP 700
PP P PPP PPP PP
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSPP 268
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Frame = +1
Query: 616 PPPPPXPPXXXP-PPXPPXPPPXXXP 690
PP P P P PP P PPP P
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAPAP 482
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.5 bits (78), Expect = 0.010
Identities = 25/71 (35%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Frame = -3
Query: 827 PGXXGGXGGXRAXXXXEXGXX-FRXVXAGXXXXPPXXXKGXXXXGAPGXXXGGGXGGXGG 651
PG GG GG G F G P G G GGG GG GG
Sbjct: 204 PGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGG 263
Query: 650 GXXXGGXGGGG 618
G GG GG G
Sbjct: 264 G--PGGHGGPG 272
Score = 32.7 bits (71), Expect = 0.070
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -2
Query: 699 GGPGXXXXXGGGGGGGGXXXXGGXGGGGG 613
GGPG GG GGG GG GG GG
Sbjct: 228 GGPGGFEGGPGGFGGGPGGFGGGLGGFGG 256
Score = 32.3 bits (70), Expect = 0.092
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -2
Query: 699 GGPGXXXXXGGGGGGGGXXXXGGXGGGGG 613
GGPG GG GGG GG GG GG
Sbjct: 242 GGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 31.9 bits (69), Expect = 0.12
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -2
Query: 699 GGPGXXXXXGGGGGGGGXXXXGGXGGGGG 613
GGPG GG GGG GG GG GG
Sbjct: 235 GGPGGFGGGPGGFGGGLGGFGGGPGGFGG 263
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 5/26 (19%)
Frame = -3
Query: 677 GGGXGGXGGG-----XXXGGXGGGGG 615
GGG GG GGG GG GG GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGG 212
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 669 GGGGGGGXXXXGGXGGGGG 613
GGG GG GG GG GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGG 212
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = -2
Query: 696 GPGXXXXXGG-GGGGGGXXXXGGXGGGGG 613
GPG GG GG G GG GGG G
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHGGFGGGPG 231
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 669 GGGGGGGXXXXGGXGGGGG 613
GGG GG GG GGG G
Sbjct: 227 GGGPGGFEGGPGGFGGGPG 245
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.1 bits (77), Expect = 0.013
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 619 PPPPXPPXXXPPPXPPXPPPXXXPGAPXXXXP 714
P PP PP PPP P P P AP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 34.7 bits (76), Expect = 0.017
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 614 PPPPPXPPXXXXPPPPPPPP 673
PPPP PP PP PPPP
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPP 1734
Score = 33.5 bits (73), Expect = 0.040
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = +3
Query: 618 PPPPXPPXXXPPPXPPXPPXXXXPRGPPXLXP 713
P PP PP PPP P PP P GPP P
Sbjct: 1705 PTPPPPPMSVPPP-PSAPP---MPAGPPSAPP 1732
Score = 33.5 bits (73), Expect = 0.040
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +1
Query: 616 PPPPPX--PPXXXPPPXPPXPPPXXXPGAPXXXXP 714
PPPPP PP PP P PP P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 32.7 bits (71), Expect = 0.070
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 609 PXPPPPPXPPXXXPPPXPPXPPXXXXPRGPPXLXP 713
P PPP PP PP P PP P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 31.1 bits (67), Expect = 0.21
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 615 PPPPPXPPXXXPPPXPPXPPXXXXPRGPPXL 707
P PPP P PPP P P PP L
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPL 1735
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 619 PPPPXPPXXXPPPXPPXPPPXXXPGAPXXXXP 714
PPPP P P PPP AP P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 617 PPPPXPPXXXXPPPPPPPPXXXXXPGPP 700
P PP P PPPPP P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAP 1721
Score = 26.6 bits (56), Expect = 4.6
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Frame = +2
Query: 623 PPXPPXXXXPPP---PPPPPXXXXXPGPPXA 706
PP P PP P PPP P PP A
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSA 1720
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/56 (28%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Frame = +3
Query: 609 PXPPPPPXPPXXXPPPX-PPXPPXXXXPRGPPXLXPLXXXGGXXXXPRXXPSKXXP 773
P PP P PP P PP PP P G P P+ P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 614 PPPPPXPPXXXXPPPPPPPPXXXXXPGP 697
PP P PP PPPP P P P
Sbjct: 1721 PPMPAGPPS--APPPPLPASSAPSVPNP 1746
Score = 25.8 bits (54), Expect = 8.0
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 619 PPPPXPPXXXPPPXPPXPPPXXXP 690
PP P PPP PPP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPP 1722
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.3 bits (70), Expect = 0.092
Identities = 20/82 (24%), Positives = 22/82 (26%)
Frame = +1
Query: 619 PPPPXPPXXXPPPXPPXPPPXXXPGAPXXXXPFXXXGGXWXXPAXTXLKXXPXSXXXXAR 798
P PP P PP P P P +P P P P +
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKA-----PPIPSSLPPPAQPAAPVK 182
Query: 799 XPPXPPXXPGGXXXXXXXXPPP 864
PP P P PPP
Sbjct: 183 SPPSAPSLPSAVPPMPPKVPPP 204
Score = 28.7 bits (61), Expect = 1.1
Identities = 18/69 (26%), Positives = 19/69 (27%)
Frame = +3
Query: 609 PXPPPPPXPPXXXPPPXPPXPPXXXXPRGPPXLXPLXXXGGXXXXPRXXPSKXXPXFGXX 788
P P PP P PP P P P P+ P P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKA--PPIPSSLPPPAQPAAPVK 182
Query: 789 XXPXAPPXP 815
P AP P
Sbjct: 183 SPPSAPSLP 191
Score = 28.3 bits (60), Expect = 1.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 615 PPPPPXPPXXXPPPXPPXPP 674
P PPP PP P P PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
Score = 28.3 bits (60), Expect = 1.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 616 PPPPPXPPXXXPPPXPPXPP 675
P PPP PP P P PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
Score = 26.6 bits (56), Expect = 4.6
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 650 PPPPPPPPXXXXXPGPP 700
PPPPP P P PP
Sbjct: 6 PPPPPAPAPAAAAPAPP 22
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 616 PPPPPXPPXXXPPPXPPXPPP 678
PP P P PP P PPP
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPP 204
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +2
Query: 617 PPPPXPPXXXXPPPPPPPPXXXXXPGPPXA 706
P PP P PP PP P P A
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASA 157
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.5 bits (68), Expect = 0.16
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -3
Query: 713 GXXXXGAPGXXXGGGXGGXGG-GXXXGGXGGGGG 615
G GA G GG GG GG G GG GG G
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSG 62
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 699 GGPGXXXXXGGGGGGGGXXXXGGXGGGGG 613
G G GG GGG GG GG GG
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 705 AXGGPGXXXXXGGGGGGGGXXXXGGXGGGGGXXK 604
A GG G GG GG GG GG G K
Sbjct: 35 ARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 699 GGPGXXXXXGGGGGGGGXXXXGGXGGGGG 613
G G GG GGG G GG GG G
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGGGRGGARG 45
Score = 26.6 bits (56), Expect = 4.6
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 706 SXGGPRGXXXXGGXGGXGGGXXXGGXGGGGGXG 608
S GG G GG GG GG G G GG G
Sbjct: 7 SRGGRGGSR--GGRGGFNGGRGGFGGGRGGARG 37
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 693 PGXXXXXGGGGGGGGXXXXGGXGGGGG 613
PG GG GG G G G GGG
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGG 31
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.16
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 1/66 (1%)
Frame = +1
Query: 505 PXGSXLKGXXXXAXPQXPLXXXNFXXPXKKXXXFXXXPPPPPXPPXXXPP-PXPPXPPPX 681
P G+ A P P K PPP PP P PP PPP
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPS 1214
Query: 682 XXPGAP 699
P P
Sbjct: 1215 TAPPVP 1220
Score = 27.9 bits (59), Expect = 2.0
Identities = 19/67 (28%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Frame = +3
Query: 618 PPPPXPPXXXPP-PXPPXPPXXXXPRGPPXLXPLXXXGGXXXXPRXXPSKXXPXFGXXXX 794
PP P P PP P P P P P + P PS P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIP--SIPAP 1079
Query: 795 PXAPPXP 815
APP P
Sbjct: 1080 SGAPPVP 1086
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Frame = +2
Query: 614 PPP---PPXPPXXXXPPPPPPPPXXXXXPGP 697
PPP PP P PP PPP P P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 4/40 (10%)
Frame = +3
Query: 609 PXPPPPPXPPXXXP----PPXPPXPPXXXXPRGPPXLXPL 716
P PPP PP P PP PP P L P+
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPV 1229
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = +1
Query: 619 PPPPXPPXXXPP-PXPPXPPPXXXPGAPXXXXP 714
PP P P PP P P PP P A P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 26.6 bits (56), Expect = 4.6
Identities = 20/68 (29%), Positives = 20/68 (29%), Gaps = 2/68 (2%)
Frame = +1
Query: 619 PPPPXPPXXXPPPXPPX--PPPXXXPGAPXXXXPFXXXGGXWXXPAXTXLKXXPXSXXXX 792
PP P P P P P PP GAP P P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP-----SVAAPPVPAPSSGIPPVPKPA 1185
Query: 793 ARXPPXPP 816
A PP PP
Sbjct: 1186 AGVPPVPP 1193
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/32 (37%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Frame = +3
Query: 609 PXPPPPPXPPXXXPPPXPPXP-PXXXXPRGPP 701
P P P PP P PP P P PP
Sbjct: 1033 PIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPP 1064
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/33 (36%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Frame = +1
Query: 619 PPPPXPPXXXPP-PXPPXPPPXXXPGAPXXXXP 714
PP P P PP P P PP P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVP 1134
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/33 (36%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Frame = +1
Query: 619 PPPPXPPXXXPP-PXPPXPPPXXXPGAPXXXXP 714
PP P P PP P P PP P P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 623 PPXPPXXXXPPPPPPPPXXXXXPGPPXA 706
PP PP PP P P P P A
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTA 1216
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.7 bits (66), Expect = 0.28
Identities = 18/69 (26%), Positives = 19/69 (27%)
Frame = +1
Query: 619 PPPPXPPXXXPPPXPPXPPPXXXPGAPXXXXPFXXXGGXWXXPAXTXLKXXPXSXXXXAR 798
P P PPP PP PP A G P + A
Sbjct: 179 PATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAP 238
Query: 799 XPPXPPXXP 825
PP PP P
Sbjct: 239 PPPPPPTLP 247
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 617 PPPPXPPXXXXPPPPPPPP 673
P P PPPPPPPP
Sbjct: 179 PATSLPSDYNPPPPPPPPP 197
Score = 27.1 bits (57), Expect(2) = 0.55
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 609 PXPPPPPXPPXXXPP 653
P P PPP PP PP
Sbjct: 234 PLPAPPPPPPPTLPP 248
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 609 PXPPPPPXPPXXXPPPXPPXPPXXXXP 689
P PP P P P PP PP P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLP 247
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 9/29 (31%)
Frame = +2
Query: 614 PPPPPXPPXXXXP---------PPPPPPP 673
PPP PP P PPPPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPP 195
Score = 21.0 bits (42), Expect(2) = 0.55
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +3
Query: 633 PPXXXPPPXPPXPP 674
PP P PP PP
Sbjct: 273 PPPPATPSQPPRPP 286
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 30.3 bits (65), Expect = 0.37
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -1
Query: 700 GGPRGXXXXGGXGGXGGGXXXGGXGGGGGXG 608
GG RG GG GGG GG GGG G
Sbjct: 148 GGSRGGFGGNSRGGFGGG-SRGGFGGGSRGG 177
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -3
Query: 716 KGXXXXGAPGXXXGGGXGGXGGGXXXGGXGGGGG 615
+G + G GG GG GGG G GG G
Sbjct: 151 RGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRG 184
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 617 PPPPXPPXXXXPPPPPPPPXXXXXPGPPXA 706
PP P P PPPPP P P A
Sbjct: 731 PPTPAPTPAVKHHPPPPPVRSSISPSMPPA 760
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 614 PPPPPXPPXXXXPPPPP 664
P P P P PPPPP
Sbjct: 732 PTPAPTPAVKHHPPPPP 748
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 614 PPPPPXPPXXXXPPPPPPPPXXXXXPGPP 700
PP P P PPPPP PP
Sbjct: 731 PPTPAPTPAVKHHPPPPPVRSSISPSMPP 759
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 628 PXPPXXXPPPXPPXPPPXXXPGAP 699
P PP PP P PP PG P
Sbjct: 492 PLPPTTFAPPGVPLPPIPGAPGMP 515
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 656 PPPPPPXXXXXPGPPXA 706
PPPPPP GPP A
Sbjct: 1882 PPPPPPMALPKAGPPSA 1898
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 609 PXPPPPPXPPXXXPPPXPPXPPXXXXPRGPP 701
P PPPP P PP P P GPP
Sbjct: 1882 PPPPPPMALPKAGPP--SAAPTSALPPAGPP 1910
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 713 GXXXXGAPGXXXGGGXGGXGGGXXXG 636
G GAPG GG GG GG G
Sbjct: 612 GGAPGGAPGGMPGGAPGGAPGGADNG 637
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 4.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 650 PPPPPPPP 673
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 4.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 650 PPPPPPPP 673
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 4.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 650 PPPPPPPP 673
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 4.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 650 PPPPPPPP 673
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 4.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 650 PPPPPPPP 673
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 26.6 bits (56), Expect = 4.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 650 PPPPPPPP 673
PPPPPPPP
Sbjct: 946 PPPPPPPP 953
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 609 PXPPPPPXPPXXXPPPXPPXP 671
P PPP P PPP PP P
Sbjct: 802 PFKAPPPAP---LPPPAPPLP 819
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = -2
Query: 333 TKDLGDSLDSNR*ANVNMTKDGSTTHIEPIRVIRSQL 223
++D+G +L+ N+ +N+ TK+ S I+ QL
Sbjct: 109 SQDVGQNLEDNQISNIGTTKEASNAPIKTTNFAGVQL 145
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,008,703
Number of Sequences: 5004
Number of extensions: 61306
Number of successful extensions: 1225
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 434475230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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