Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_J04
         (828 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80223-5|CAB02321.1|  153|Caenorhabditis elegans Hypothetical pr...    35   0.082
U64836-4|AAG24059.1|  417|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U41556-7|AAP68954.1|  145|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U41556-6|AAP68953.1|  248|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U41556-5|AAK39193.1|  212|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U88169-11|AAB42238.2|  308|Caenorhabditis elegans C-type lectin ...    28   7.1  
U58752-8|AAB00670.1|  308|Caenorhabditis elegans C-type lectin p...    28   9.4  
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr...    28   9.4  

>Z80223-5|CAB02321.1|  153|Caenorhabditis elegans Hypothetical
           protein F26D10.12 protein.
          Length = 153

 Score = 34.7 bits (76), Expect = 0.082
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +3

Query: 267 YKKWVDAKKTCEMEGATFFYPDDKFEFDAVTTYWNTSQPFEWISIGISSQM 419
           +  + ++ K CE  GA  F+ DD FEF+AV   +     F W+   +  ++
Sbjct: 47  FSSFRESVKNCEKRGAKLFHFDDSFEFEAVRNLF-PDYYFTWMQAEVEEEL 96


>U64836-4|AAG24059.1|  417|Caenorhabditis elegans Hypothetical
           protein F10G2.3 protein.
          Length = 417

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = +3

Query: 174 NSF-MDNGKISFSGKDYTYIESTESFYKIHTLYKKWVDAKKTCEMEGATFFYPDDKFEFD 350
           NS+ + + K+     ++T I +     K+ T       A+KTC   GAT     ++ +  
Sbjct: 13  NSYSVTSSKVPVCTNEFTLINN--KCLKLFTTPANHSAAEKTCRKYGATLVTVKNENDNH 70

Query: 351 AVTTYWNTSQPFEWISI 401
           A++T+  TS    WI +
Sbjct: 71  AISTFAGTSASLLWIGL 87


>U41556-7|AAP68954.1|  145|Caenorhabditis elegans Hypothetical
           protein C25B8.4c protein.
          Length = 145

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = +3

Query: 225 YIESTESFYKIHTLYKKWVDAKKTCEMEGATFFYPDDKFEFDAVTTYWNTSQPFEWISI 401
           ++  ++S Y I    + + +A+K C  + AT F  + + E+DAV  ++     + WI +
Sbjct: 62  WVRFSDSCYWIEQHKQSFAEAEKRCYEKNATLFVVNSQDEWDAVREHF-PQTGYTWIGL 119


>U41556-6|AAP68953.1|  248|Caenorhabditis elegans Hypothetical
           protein C25B8.4b protein.
          Length = 248

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = +3

Query: 225 YIESTESFYKIHTLYKKWVDAKKTCEMEGATFFYPDDKFEFDAVTTYWNTSQPFEWISI 401
           ++  ++S Y I    + + +A+K C  + AT F  + + E+DAV  ++     + WI +
Sbjct: 98  WVRFSDSCYWIEQHKQSFAEAEKRCYEKNATLFVVNSQDEWDAVREHF-PQTGYTWIGL 155


>U41556-5|AAK39193.1|  212|Caenorhabditis elegans Hypothetical
           protein C25B8.4a protein.
          Length = 212

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = +3

Query: 225 YIESTESFYKIHTLYKKWVDAKKTCEMEGATFFYPDDKFEFDAVTTYWNTSQPFEWISI 401
           ++  ++S Y I    + + +A+K C  + AT F  + + E+DAV  ++     + WI +
Sbjct: 62  WVRFSDSCYWIEQHKQSFAEAEKRCYEKNATLFVVNSQDEWDAVREHF-PQTGYTWIGL 119


>U88169-11|AAB42238.2|  308|Caenorhabditis elegans C-type lectin
           protein 53 protein.
          Length = 308

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 219 YTYIESTESFYKIHTLYKKWVDAKKTCEMEG 311
           YT+ E+T+  YK    +  + DA+  C+ +G
Sbjct: 170 YTWFETTDFCYKTTVQFTNFNDARSACQADG 200


>U58752-8|AAB00670.1|  308|Caenorhabditis elegans C-type lectin
           protein 52 protein.
          Length = 308

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 219 YTYIESTESFYKIHTLYKKWVDAKKTCEMEG 311
           YT+ E T+  YK    Y  + DA+  C+ +G
Sbjct: 170 YTWFELTDFCYKNTVQYTNFNDARSACQADG 200


>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical
           protein C16A3.3 protein.
          Length = 1743

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 189 NGKISFSGKDYTYIESTESFYKIHTLYKKWVDAKKTCE 302
           NGK++    D T +E   +  KI  +  K VD KKT E
Sbjct: 823 NGKVTKELDDLTLVEFEHNGKKIAGILPKMVDDKKTTE 860


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,692,746
Number of Sequences: 27780
Number of extensions: 263119
Number of successful extensions: 595
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)