Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_J04
         (828 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   4.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   4.6  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.0  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.0  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +3

Query: 369 NTSQPFEWISI---GISSQMXKGVFETVDG 449
           N SQPF+W++    G   ++ +G+ E  +G
Sbjct: 220 NLSQPFQWLASDGWGRQIKLVEGLEEEAEG 249


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +3

Query: 369 NTSQPFEWISI---GISSQMXKGVFETVDG 449
           N SQPF+W++    G   ++ +G+ E  +G
Sbjct: 310 NLSQPFQWLASDGWGRQIKLVEGLEEEAEG 339


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 825 CQIFPSHLSXGXNLVMFXKG 766
           C++FP HL    +L++   G
Sbjct: 212 CRVFPFHLMFNRDLIIVQTG 231


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 825 CQIFPSHLSXGXNLVMFXKG 766
           C++FP HL    +L++   G
Sbjct: 212 CRVFPFHLMFNRDLIIVQTG 231


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,500
Number of Sequences: 438
Number of extensions: 3290
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)