Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_I20
         (878 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1682 - 39130696-39131705,39132355-39132583                       30   2.8  

>01_06_1682 - 39130696-39131705,39132355-39132583
          Length = 412

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 29/117 (24%), Positives = 45/117 (38%), Gaps = 5/117 (4%)
 Frame = +1

Query: 475 SLPDISSC*IPL*AS-ARLSIRSPSKQNCVFSASFLTFSIA*KCXEICM*LETXPPXGXR 651
           S P  S C +P+  + + LS+ S S +  V  A+ +    + K    C      PP    
Sbjct: 127 SAPGGSDCNVPIELNLSGLSVYSKSNEEVVLQANQVMAFASQKTFGFCSKPHIQPPIFPY 186

Query: 652 XQTIPTPYXFKLTFYPXRXCXKXSPLXPPICVFNXWP----XXPLXTQHSGHIXPPH 810
               P+PY +    +  +     +   PP   FN +P      P   Q S H  PP+
Sbjct: 187 NSPPPSPYQYPSPPFNYKSPPLPNQFSPP--PFNKFPPPSHQYPSPPQSSYHSPPPY 241


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,836,290
Number of Sequences: 37544
Number of extensions: 335857
Number of successful extensions: 819
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)