Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_I17
(903 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78066-8|CAE48546.1| 204|Caenorhabditis elegans Hypothetical pr... 77 2e-14
Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical pr... 77 2e-14
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 77 2e-14
Z78066-5|CAB01523.1| 222|Caenorhabditis elegans Hypothetical pr... 77 2e-14
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 77 2e-14
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 75 9e-14
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 33 0.37
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 32 0.65
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 32 0.65
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 32 0.65
U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog (hedg... 26 0.67
AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical ... 25 0.68
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 25 0.68
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 25 0.68
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 25 0.68
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 25 0.68
L25598-5|AAM15550.1| 113|Caenorhabditis elegans Calpain family ... 31 0.85
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 31 1.1
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 31 1.1
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 31 1.1
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 31 1.1
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 25 1.5
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 30 2.0
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 30 2.0
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 30 2.0
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 2.0
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 2.0
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 2.0
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 2.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.0
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 25 2.4
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 25 2.5
Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical pr... 30 2.6
U29380-1|AAA68740.1| 346|Caenorhabditis elegans Hypothetical pr... 30 2.6
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.6
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 29 3.4
U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical pr... 29 3.4
U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL132864-5|CAH60767.2| 281|Caenorhabditis elegans Hypothetical ... 29 3.4
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 3.4
U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical pr... 25 4.1
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 29 4.5
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 4.5
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 29 4.5
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 25 5.4
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 25 5.4
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 25 5.4
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 25 5.5
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 25 5.5
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.0
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 6.0
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 6.0
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 6.0
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 6.0
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 29 6.0
AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical ... 25 6.9
Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical pr... 28 7.9
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 7.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 7.9
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 28 7.9
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 28 7.9
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 28 7.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 7.9
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 28 7.9
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 28 7.9
>Z78066-8|CAE48546.1| 204|Caenorhabditis elegans Hypothetical
protein W06A7.3e protein.
Length = 204
Score = 77.0 bits (181), Expect = 2e-14
Identities = 35/113 (30%), Positives = 63/113 (55%)
Frame = +1
Query: 268 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 447
FR++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 58 FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 117
Query: 448 DLVDSLKFGVLLWCLTYVGACFNGITLIILXWIALFTLPXAYXMNKAXVDANL 606
++S+KFG++LW LTY+ + F+G TL IL + +F++P Y N+ +D +L
Sbjct: 118 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 170
>Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical
protein W06A7.3d protein.
Length = 570
Score = 77.0 bits (181), Expect = 2e-14
Identities = 35/113 (30%), Positives = 63/113 (55%)
Frame = +1
Query: 268 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 447
FR++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 424 FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 483
Query: 448 DLVDSLKFGVLLWCLTYVGACFNGITLIILXWIALFTLPXAYXMNKAXVDANL 606
++S+KFG++LW LTY+ + F+G TL IL + +F++P Y N+ +D +L
Sbjct: 484 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 536
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 77.0 bits (181), Expect = 2e-14
Identities = 35/113 (30%), Positives = 63/113 (55%)
Frame = +1
Query: 268 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 447
FR++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 2338 FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 2397
Query: 448 DLVDSLKFGVLLWCLTYVGACFNGITLIILXWIALFTLPXAYXMNKAXVDANL 606
++S+KFG++LW LTY+ + F+G TL IL + +F++P Y N+ +D +L
Sbjct: 2398 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 2450
>Z78066-5|CAB01523.1| 222|Caenorhabditis elegans Hypothetical
protein W06A7.3b protein.
Length = 222
Score = 77.0 bits (181), Expect = 2e-14
Identities = 35/113 (30%), Positives = 63/113 (55%)
Frame = +1
Query: 268 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 447
FR++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 76 FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 135
Query: 448 DLVDSLKFGVLLWCLTYVGACFNGITLIILXWIALFTLPXAYXMNKAXVDANL 606
++S+KFG++LW LTY+ + F+G TL IL + +F++P Y N+ +D +L
Sbjct: 136 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 188
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 77.0 bits (181), Expect = 2e-14
Identities = 35/113 (30%), Positives = 63/113 (55%)
Frame = +1
Query: 268 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 447
FR++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 2461 FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 2520
Query: 448 DLVDSLKFGVLLWCLTYVGACFNGITLIILXWIALFTLPXAYXMNKAXVDANL 606
++S+KFG++LW LTY+ + F+G TL IL + +F++P Y N+ +D +L
Sbjct: 2521 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 2573
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 74.5 bits (175), Expect = 9e-14
Identities = 34/113 (30%), Positives = 62/113 (54%)
Frame = +1
Query: 268 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 447
F ++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 2342 FSVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 2401
Query: 448 DLVDSLKFGVLLWCLTYVGACFNGITLIILXWIALFTLPXAYXMNKAXVDANL 606
++S+KFG++LW LTY+ + F+G TL IL + +F++P Y N+ +D +L
Sbjct: 2402 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 2454
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 32.7 bits (71), Expect = 0.37
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 835 PKXPPXXXXXXPXXPPPPPPXPP 903
P PP P PPPPPP PP
Sbjct: 49 PICPPQFCPPPPMCPPPPPPPPP 71
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 832 CPKXPPXXXXXXPXXPPPPPPXP 900
CP PP P PPPPPP P
Sbjct: 62 CPPPPPPPPP--PMCPPPPPPMP 82
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 832 CPKXPPXXXXXXPXXPPPPPPXPP 903
CP PP P PPPP PP
Sbjct: 30 CPPPPPPMCAPPPLPCPPPPICPP 53
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 834 PQXXPXXXXXSXPXPPPPPPPXP 902
PQ P P PPPPPP P
Sbjct: 53 PQFCPPPPMCPPPPPPPPPPMCP 75
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Frame = +1
Query: 832 CPKX--PPXXXXXXPXXPPPPPPXPP 903
CP PP P PPPPP PP
Sbjct: 51 CPPQFCPPPPMCPPPPPPPPPPMCPP 76
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.49
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 834 PQXXPXXXXXSXPXPPPPPPPXP 902
P P S P PPPPPPP P
Sbjct: 500 PPLPPIATPSSVPPPPPPPPPPP 522
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 802 SPKX*XXQNNCPKXPPXXXXXXPXXPPPPPPXPP 903
SP+ + P PP P PPPPP PP
Sbjct: 486 SPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 519
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 835 PKXPPXXXXXXPXXPPPPPPXPP 903
P PP PPPPPP PP
Sbjct: 500 PPLPPIATPSSVPPPPPPPPPPP 522
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +3
Query: 804 PEXLTXTKQLPQXXPXXXXXSXPXPPPPPPPXP 902
P ++ + P P S PPPPPPP P
Sbjct: 489 PAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPP 521
Score = 29.5 bits (63), Expect = 3.4
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 863 IXPXPPPPPPPXP 901
+ P PPPPPPP P
Sbjct: 511 VPPPPPPPPPPPP 523
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 835 PKXPPXXXXXXPXXPPPPPPXPP 903
P P P PPPPPP PP
Sbjct: 501 PLPPIATPSSVPPPPPPPPPPPP 523
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 31.9 bits (69), Expect = 0.65
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 804 PEXLTXTKQLPQXXPXXXXXSXPXPPPPPPPXP 902
P+ ++ + P + P PPPPPPP P
Sbjct: 336 PQPAATPVEITEIPPIISPPAPPPPPPPPPPPP 368
Score = 31.5 bits (68), Expect = 0.85
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 844 PPXXXXXXPXXPPPPPPXPP 903
PP P PPPPPP PP
Sbjct: 349 PPIISPPAPPPPPPPPPPPP 368
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 870 PXPPPPPPPXP 902
P PPPPPPP P
Sbjct: 359 PPPPPPPPPPP 369
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 869 PXPPPPPPPXP 901
P PPPPPPP P
Sbjct: 360 PPPPPPPPPPP 370
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 844 PPXXXXXXPXXPPPPPPXPP 903
PP P PPPPPP P
Sbjct: 354 PPAPPPPPPPPPPPPPPQTP 373
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 31.9 bits (69), Expect = 0.65
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 800 LPRXSNXXKTIAPKXPXXXXXIXPXPPPPPPPXP 901
LP + +TIA P PPPPPPP P
Sbjct: 766 LPPKPSVAQTIAMHSAPPSPLTAPIPPPPPPPPP 799
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 31.9 bits (69), Expect = 0.65
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 800 LPRXSNXXKTIAPKXPXXXXXIXPXPPPPPPPXP 901
LP + +TIA P PPPPPPP P
Sbjct: 665 LPPKPSVAQTIAMHSAPPSPLTAPIPPPPPPPPP 698
>U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 8 protein.
Length = 373
Score = 26.2 bits (55), Expect(2) = 0.67
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 875 PPPPPPPXP 901
PPPPPPP P
Sbjct: 233 PPPPPPPGP 241
Score = 24.2 bits (50), Expect(2) = 0.67
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 863 IXPXPPPPPP 892
+ P PPPPPP
Sbjct: 230 VIPPPPPPPP 239
>AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical
protein C30F8.3 protein.
Length = 328
Score = 25.4 bits (53), Expect(2) = 0.68
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +2
Query: 836 PKXPXXXXXIXPXPPPPPPP 895
P P PPPPPPP
Sbjct: 61 PAYPFAPQVFTQPPPPPPPP 80
Score = 25.0 bits (52), Expect(2) = 0.68
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 869 PXPPPPPPPXP 901
P PPPPPP P
Sbjct: 73 PPPPPPPPVLP 83
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 25.4 bits (53), Expect(2) = 0.68
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 895 GGGGGGGXGXDXXXXXG 845
GGGGGGG G D G
Sbjct: 89 GGGGGGGGGCDGCCNPG 105
Score = 25.0 bits (52), Expect(2) = 0.68
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 901 GXGGGGGGGXG 869
G GGGGGGG G
Sbjct: 86 GAGGGGGGGGG 96
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 25.4 bits (53), Expect(2) = 0.68
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 895 GGGGGGGXGXDXXXXXG 845
GGGGGGG G D G
Sbjct: 89 GGGGGGGGGCDGCCNPG 105
Score = 25.0 bits (52), Expect(2) = 0.68
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 901 GXGGGGGGGXG 869
G GGGGGGG G
Sbjct: 86 GAGGGGGGGGG 96
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 25.4 bits (53), Expect(2) = 0.68
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 895 GGGGGGGXGXDXXXXXG 845
GGGGGGG G D G
Sbjct: 89 GGGGGGGGGCDGCCNPG 105
Score = 25.0 bits (52), Expect(2) = 0.68
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 901 GXGGGGGGGXG 869
G GGGGGGG G
Sbjct: 86 GAGGGGGGGGG 96
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 25.4 bits (53), Expect(2) = 0.68
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 895 GGGGGGGXGXDXXXXXG 845
GGGGGGG G D G
Sbjct: 89 GGGGGGGGGCDGCCNPG 105
Score = 25.0 bits (52), Expect(2) = 0.68
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 901 GXGGGGGGGXG 869
G GGGGGGG G
Sbjct: 86 GAGGGGGGGGG 96
>L25598-5|AAM15550.1| 113|Caenorhabditis elegans Calpain family
protein 1, isoform c protein.
Length = 113
Score = 31.5 bits (68), Expect = 0.85
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -3
Query: 901 GXGGGGGGGXGXDXXXXXGXFWGNCFV 821
G GGGGGGG G G F G F+
Sbjct: 53 GGGGGGGGGGGGGFGGGNGGFGGGIFI 79
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 868 PXXPPPPPPXPP 903
P PPPPPP PP
Sbjct: 573 PGGPPPPPPPPP 584
Score = 26.2 bits (55), Expect(2) = 1.0
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 875 PPPPPPPXP 901
PPPPPPP P
Sbjct: 577 PPPPPPPPP 585
Score = 23.4 bits (48), Expect(2) = 1.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 869 PXPPPPPP 892
P PPPPPP
Sbjct: 536 PTPPPPPP 543
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 802 SPKX*XXQNNCPKXPPXXXXXXPXXPPPPPPXPP 903
SP+ + P PP P PPPPP PP
Sbjct: 479 SPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 512
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 822 TKQLPQXXPXXXXXSXPXPPPPPPPXP 902
T +P P S PPPPPPP P
Sbjct: 790 TSSVPPPPPPLPPISSGAPPPPPPPPP 816
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 826 NNCPKXPPXXXXXXPXXPPPPPPXPP 903
++ P PP PPPPPP PP
Sbjct: 791 SSVPPPPPPLPPISSGAPPPPPPPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 822 TKQLPQXXPXXXXXSXPXPPPPPPPXP 902
T +P P S PPPPPPP P
Sbjct: 790 TSSVPPPPPPLPPISSGAPPPPPPPPP 816
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 826 NNCPKXPPXXXXXXPXXPPPPPPXPP 903
++ P PP PPPPPP PP
Sbjct: 791 SSVPPPPPPLPPISSGAPPPPPPPPP 816
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 806 RXSNXXKTIAPKXPXXXXXIXPXPPPPPPP 895
R + KT++ + P P PPPPPPP
Sbjct: 285 RAPDIGKTLSTQPPRRTPQPHPKPPPPPPP 314
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 829 NCPKXPPXXXXXXPXXPPPPPPXPP 903
NC PP PPPPPP PP
Sbjct: 168 NCIGGPPHCECENCPKPPPPPPIPP 192
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 829 NCPKXPPXXXXXXPXXPPPPPPXP 900
NCPK PP P PPP PP P
Sbjct: 180 NCPKPPP-----PPPIPPPGPPPP 198
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 829 NCPKXPPXXXXXXPXXPPPPPPXPP 903
NC PP PPPPPP PP
Sbjct: 168 NCIGGPPHCECENCPKPPPPPPIPP 192
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 829 NCPKXPPXXXXXXPXXPPPPPPXP 900
NCPK PP P PPP PP P
Sbjct: 180 NCPKPPP-----PPPIPPPGPPPP 198
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 828 QLPQXXPXXXXXSXPXPPPPPPPXP 902
Q PQ + P PPPPPPP P
Sbjct: 70 QPPQPYAQSPIAAVPPPPPPPPPQP 94
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 835 PKXPPXXXXXXPXXPPPPPPXP 900
P PP P PPPPPP P
Sbjct: 108 PCCPPPPAPAAPCCPPPPPPTP 129
Score = 25.4 bits (53), Expect(2) = 1.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 870 PXPPPPPPPXP 902
P PPPPPP P
Sbjct: 88 PLPPPPPPASP 98
Score = 24.2 bits (50), Expect(2) = 1.2
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +3
Query: 834 PQXXPXXXXXSXPXPPPPPPP 896
P+ P P P PPPPP
Sbjct: 74 PRPSPSCCPYVPPAPLPPPPP 94
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 25.0 bits (52), Expect(2) = 1.5
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 901 GXGGGGGGGXG 869
G GGGGGGG G
Sbjct: 94 GAGGGGGGGGG 104
Score = 24.2 bits (50), Expect(2) = 1.5
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -3
Query: 892 GGGGGGXGXDXXXXXGXFWGNC 827
GGGGGG G + G G C
Sbjct: 96 GGGGGGGGGEAAGGGGGCTGCC 117
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 845 PXXXXXIXPXPPPPPPPXP 901
P + P PPPPPPP P
Sbjct: 243 PPREKSVPPPPPPPPPPKP 261
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 845 PXXXXXIXPXPPPPPPPXP 901
P + P PPPPPPP P
Sbjct: 258 PPREKSVPPPPPPPPPPKP 276
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 845 PXXXXXIXPXPPPPPPPXP 901
P + P PPPPPPP P
Sbjct: 243 PPREKSVPPPPPPPPPPKP 261
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 845 PXXXXXIXPXPPPPPPPXP 901
P + P PPPPPPP P
Sbjct: 258 PPREKSVPPPPPPPPPPKP 276
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1
Query: 826 NNCPKXPPXXXXXXPXXPPPPPPXPP 903
+ P PP PPPPPP PP
Sbjct: 231 HGAPPPPPLPPVGAGAPPPPPPPPPP 256
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 835 PKXPPXXXXXXPXXPPPPPPXPP 903
P PP PPPPPP PP
Sbjct: 70 PPPPPPLISILQQAPPPPPPPPP 92
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 835 PKXPPXXXXXXPXXPPPPPPXPP 903
P PP PPPPPP PP
Sbjct: 71 PPPPPLISILQQAPPPPPPPPPP 93
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1
Query: 826 NNCPKXPPXXXXXXPXXPPPPPPXPP 903
+ P PP PPPPPP PP
Sbjct: 217 HGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1
Query: 826 NNCPKXPPXXXXXXPXXPPPPPPXPP 903
+ P PP PPPPPP PP
Sbjct: 217 HGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 835 PKXPPXXXXXXPXXPPPPPPXPP 903
P PP PPPPPP PP
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPPP 584
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 870 PXPPPPPPPXP 902
P PPPPPPP P
Sbjct: 559 PIPPPPPPPLP 569
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 25.4 bits (53), Expect(2) = 2.4
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 868 PXXPPPPPPXP 900
P PPPPPP P
Sbjct: 60 PALPPPPPPPP 70
Score = 23.0 bits (47), Expect(2) = 2.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 877 PPPPPPXPP 903
PPPPPP P
Sbjct: 64 PPPPPPPAP 72
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 25.4 bits (53), Expect(2) = 2.5
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 868 PXXPPPPPPXP 900
P PPPPPP P
Sbjct: 60 PALPPPPPPPP 70
Score = 23.0 bits (47), Expect(2) = 2.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 877 PPPPPPXPP 903
PPPPPP P
Sbjct: 64 PPPPPPPAP 72
>Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical
protein T23G5.3 protein.
Length = 262
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +3
Query: 771 TXXPXIXVICFPEXLTXTKQLPQXXPXXXXXSXPXPPPPPPPXP 902
T P + P + K+ P S P PPPPPPP P
Sbjct: 108 TCPPELPSTPIPNQILTQKENVPIVPRNLLLSKP-PPPPPPPLP 150
>U29380-1|AAA68740.1| 346|Caenorhabditis elegans Hypothetical
protein ZK546.7 protein.
Length = 346
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 829 NCPKXPPXXXXXXPXXPPPPPPXP 900
NCPK PP P PPP PP P
Sbjct: 145 NCPKLPP-----PPPIPPPGPPPP 163
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 833 APKXPXXXXXIXPXPPPPPPP 895
AP P P PPPPPPP
Sbjct: 40 APPPPPMCGCAPPPPPPPPPP 60
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 832 CPKXPPXXXXXXPXXPPPPPPXPP 903
C PP P PPPPPP PP
Sbjct: 39 CAPPPPPMCGCAP--PPPPPPPPP 60
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 864 SXPXPPPPPPPXP 902
S P PPPPPPP P
Sbjct: 1334 SSPSPPPPPPPPP 1346
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 836 PKXPXXXXXIXPXPPPPPPP 895
P P + P PPPPPPP
Sbjct: 1343 PPPPPPSDDLTPVPPPPPPP 1362
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 870 PXPPPPPPPXP 902
P PPPPPPP P
Sbjct: 1338 PPPPPPPPPPP 1348
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 868 PXXPPPPPPXPP 903
P PPPPPP PP
Sbjct: 1336 PSPPPPPPPPPP 1347
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1
Query: 552 QRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQ 439
Q+Y ++ PV+ RP V++ Q H E Q+ ++L Q
Sbjct: 267 QQYKPPPQQQPPVQMRPPVQQPQQNHQEEQQNAELLMQ 304
>U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical
protein W03B1.9 protein.
Length = 633
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 830 IAPKXPXXXXXIXPXPPPPPPPXP 901
+ P P + PPPPPPP P
Sbjct: 430 VLPAPPLQVGLVGRVPPPPPPPPP 453
>U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical
protein W03B1.5 protein.
Length = 581
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 830 IAPKXPXXXXXIXPXPPPPPPPXP 901
+ P P + PPPPPPP P
Sbjct: 378 VLPAPPLQVGLVGRVPPPPPPPPP 401
>AL132864-5|CAH60767.2| 281|Caenorhabditis elegans Hypothetical
protein Y53H1A.5 protein.
Length = 281
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -1
Query: 564 RQREQRYPTEDDERDPVEARPHVREAPQQHAELQR 460
++RE R ED R P+E + ++ E+ +QHA +R
Sbjct: 161 KRREMRQKMEDSGRLPLERQKYMHESRRQHALKRR 195
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 846 PXXXXXSXPXPPPPPPPXP 902
P + P PPPPPPP P
Sbjct: 134 PPPTPAAPPPPPPPPPPAP 152
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 868 PXXPPPPPPXPP 903
P PPPPPP PP
Sbjct: 138 PAAPPPPPPPPP 149
>U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical
protein ZK354.8 protein.
Length = 483
Score = 25.0 bits (52), Expect(2) = 4.1
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 825 KQLPQXXPXXXXXSXPXPPPPPPP 896
KQ P+ P PPPPPP
Sbjct: 79 KQEPEVAMKTMMLPPPSDPPPPPP 102
Score = 22.6 bits (46), Expect(2) = 4.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 876 PPPPPPPXP 902
PPPPPP P
Sbjct: 98 PPPPPPVAP 106
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 29.1 bits (62), Expect = 4.5
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 863 IXPXPPPPPPPXP 901
+ P PPPPPPP P
Sbjct: 514 LPPLPPPPPPPKP 526
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 29.1 bits (62), Expect = 4.5
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 863 IXPXPPPPPPPXP 901
+ P PPPPPPP P
Sbjct: 358 LVPPPPPPPPPPP 370
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 832 CPKXPPXXXXXXPXXPPPPPPXPP 903
CP PP P P PPP PP
Sbjct: 54 CPPPPPCPAQFCPPPPICPPPPPP 77
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 29.1 bits (62), Expect = 4.5
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 863 IXPXPPPPPPPXP 901
+ P PPPPPPP P
Sbjct: 514 LPPLPPPPPPPKP 526
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 24.6 bits (51), Expect(2) = 5.4
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 895 GGGGGGGXGXDXXXXXGXFWG 833
GGGG GG G G WG
Sbjct: 264 GGGGQGGWGGPQQQQGGGGWG 284
Score = 22.6 bits (46), Expect(2) = 5.4
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 901 GXGGGGGGGXG 869
G GGGGGG G
Sbjct: 218 GYNGGGGGGGG 228
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 24.6 bits (51), Expect(2) = 5.4
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 895 GGGGGGGXGXDXXXXXGXFWG 833
GGGG GG G G WG
Sbjct: 265 GGGGQGGWGGPQQQQGGGGWG 285
Score = 22.6 bits (46), Expect(2) = 5.4
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 901 GXGGGGGGGXG 869
G GGGGGG G
Sbjct: 218 GYNGGGGGGGG 228
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 24.6 bits (51), Expect(2) = 5.4
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 895 GGGGGGGXGXDXXXXXGXFWG 833
GGGG GG G G WG
Sbjct: 264 GGGGQGGWGGPQQQQGGGGWG 284
Score = 22.6 bits (46), Expect(2) = 5.4
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 901 GXGGGGGGGXG 869
G GGGGGG G
Sbjct: 218 GYNGGGGGGGG 228
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 24.6 bits (51), Expect(2) = 5.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 895 GGGGGGGXGXDXXXXXGXFWG 833
GGGG GG G G WG
Sbjct: 227 GGGGQGGWGGPQQQQGGGGWG 247
Score = 22.6 bits (46), Expect(2) = 5.5
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 901 GXGGGGGGGXG 869
G GGGGGG G
Sbjct: 180 GYNGGGGGGGG 190
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 24.6 bits (51), Expect(2) = 5.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 895 GGGGGGGXGXDXXXXXGXFWG 833
GGGG GG G G WG
Sbjct: 226 GGGGQGGWGGPQQQQGGGGWG 246
Score = 22.6 bits (46), Expect(2) = 5.5
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 901 GXGGGGGGGXG 869
G GGGGGG G
Sbjct: 180 GYNGGGGGGGG 190
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 902 GGXGGGGGGXXGXXXXXXGGXLG 834
GG GGGGGG G GG G
Sbjct: 120 GGCGGGGGGCGGGCGGGGGGGCG 142
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 901 GXGGGGGGGXGXDXXXXXGXFWGNC 827
G GGGGGGG G G G C
Sbjct: 132 GCGGGGGGGCGGGGGGGCGGGGGGC 156
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 870 PXPPPPPPPXP 902
P PPPPPPP P
Sbjct: 302 PPPPPPPPPPP 312
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 869 PXPPPPPPPXP 901
P PPPPPPP P
Sbjct: 304 PPPPPPPPPAP 314
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 870 PXPPPPPPPXP 902
P PPPPPPP P
Sbjct: 302 PPPPPPPPPPP 312
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 869 PXPPPPPPPXP 901
P PPPPPPP P
Sbjct: 304 PPPPPPPPPAP 314
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 902 GGXGGGGGGXXGXXXXXXGGXLGQ 831
GG GGGGGG G GG G+
Sbjct: 112 GGGGGGGGGRGGGGGGRGGGGRGR 135
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3
Query: 804 PEXLTXTKQLPQXXPXXXXXSXPXPPPPPPP 896
P + Q PQ P PPPPPPP
Sbjct: 118 PPPVQYQNQGPQYIEAPPPPPSPPPPPPPPP 148
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 870 PXPPPPPPPXP 902
P PPPPPPP P
Sbjct: 138 PSPPPPPPPPP 148
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 868 PXXPPPPPPXPP 903
P PPPPPP PP
Sbjct: 137 PPSPPPPPPPPP 148
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 834 PQXXPXXXXXSXPXPPPPPPPXP 902
P+ P P PPPPP P P
Sbjct: 15 PESAPAATTPQPPPPPPPPKPAP 37
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 869 PXPPPPPPPXP 901
P PPPPPPP P
Sbjct: 2 PPPPPPPPPPP 12
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 870 PXPPPPPPPXP 902
P PPPPPPP P
Sbjct: 3 PPPPPPPPPPP 13
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 870 PXPPPPPPPXP 902
P PPPPPPP P
Sbjct: 4 PPPPPPPPPPP 14
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 869 PXPPPPPPPXP 901
P PPPPPPP P
Sbjct: 5 PPPPPPPPPPP 15
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 870 PXPPPPPPPXP 902
P PPPPPPP P
Sbjct: 6 PPPPPPPPPPP 16
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 870 PXPPPPPPPXP 902
P PPPPPPP P
Sbjct: 7 PPPPPPPPPPP 17
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 869 PXPPPPPPPXP 901
P PPPPPPP P
Sbjct: 2 PPPPPPPPPPP 12
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 870 PXPPPPPPPXP 902
P PPPPPPP P
Sbjct: 3 PPPPPPPPPPP 13
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 870 PXPPPPPPPXP 902
P PPPPPPP P
Sbjct: 4 PPPPPPPPPPP 14
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 869 PXPPPPPPPXP 901
P PPPPPPP P
Sbjct: 5 PPPPPPPPPPP 15
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 870 PXPPPPPPPXP 902
P PPPPPPP P
Sbjct: 6 PPPPPPPPPPP 16
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 870 PXPPPPPPPXP 902
P PPPPPPP P
Sbjct: 7 PPPPPPPPPPP 17
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 836 PKXPXXXXXIXPXPPPPPPP 895
P P P PPPPPPP
Sbjct: 318 PSPPLLPPVCPPAPPPPPPP 337
>AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical
protein Y4C6B.1 protein.
Length = 442
Score = 24.6 bits (51), Expect(2) = 6.9
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +2
Query: 812 SNXXKTIAPKXPXXXXXIXPXPPPPPP 892
S+ KT + P PPPPPP
Sbjct: 296 SSSSKTSTASVQLAPMCMAPPPPPPPP 322
Score = 22.2 bits (45), Expect(2) = 6.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 869 PXPPPPPPP 895
P PPPPP P
Sbjct: 316 PPPPPPPLP 324
>Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical
protein F49B2.3 protein.
Length = 322
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 868 PXXPPPPPPXPP 903
P PPPPPP PP
Sbjct: 261 PSQPPPPPPPPP 272
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 835 PKXPPXXXXXXPXXPPPPPP 894
P PP P PPPPPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 835 PKXPPXXXXXXPXXPPPPPP 894
P PP P PPPPPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPP 777
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 901 GXGGGGGGGXGXDXXXXXGXFWG 833
G GGGGGGG G G F G
Sbjct: 53 GGGGGGGGGGGGGFGGGNGGFGG 75
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 901 GXGGGGGGGXGXDXXXXXGXFWG 833
G GGGGGGG G G F G
Sbjct: 53 GGGGGGGGGGGGGFGGGNGGFGG 75
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 901 GXGGGGGGGXGXDXXXXXGXFWG 833
G GGGGGGG G G F G
Sbjct: 53 GGGGGGGGGGGGGFGGGNGGFGG 75
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 835 PKXPPXXXXXXPXXPPPPPP 894
P PP P PPPPPP
Sbjct: 341 PPPPPPPPGGCPPPPPPPPP 360
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 868 PXXPPPPPPXPP 903
P PPPPPP PP
Sbjct: 1009 PGGPPPPPPPPP 1020
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 868 PXXPPPPPPXPP 903
P PPPPPP PP
Sbjct: 248 PGGPPPPPPPPP 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,967,777
Number of Sequences: 27780
Number of extensions: 222332
Number of successful extensions: 8694
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 1353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3719
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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