Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_I13
(857 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0070 + 27479654-27479672,27479864-27479922,27480339-274803... 131 6e-31
01_06_0260 - 27959188-27959251,27959342-27959424,27960220-279603... 130 1e-30
07_01_0479 + 3606663-3607448 35 0.096
02_04_0536 + 23730396-23731736 33 0.22
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 33 0.39
12_02_1174 - 26696869-26698191 32 0.67
01_01_0975 - 7686297-7686458,7687117-7687245,7687754-7687831,768... 31 0.89
01_01_0046 - 331758-332627 31 0.89
07_03_1160 - 24430240-24431268 31 1.2
08_01_0059 - 394001-394708 29 3.6
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 29 6.3
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 29 6.3
11_04_0307 + 16185405-16185713,16185847-16185942,16186626-161867... 28 8.3
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 28 8.3
>05_07_0070 +
27479654-27479672,27479864-27479922,27480339-27480378,
27480477-27480565,27481065-27481147,27481219-27481282
Length = 117
Score = 131 bits (317), Expect = 6e-31
Identities = 57/89 (64%), Positives = 69/89 (77%)
Frame = +3
Query: 93 KMAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKR 272
++ KRTKK GI GKYGTRYGASLRK +KKMEV+QH+KY C FCGK A+KR VGIW CK
Sbjct: 25 ELTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKD 84
Query: 273 CKRTVAGGAWVFSTTAASSCRSAVRRLRE 359
C + AGGA+ +T +A + RS +RRLRE
Sbjct: 85 CGKVKAGGAYTMNTASAVTVRSTIRRLRE 113
>01_06_0260 -
27959188-27959251,27959342-27959424,27960220-27960308,
27960388-27960427,27960938-27960981,27961240-27961288
Length = 122
Score = 130 bits (314), Expect = 1e-30
Identities = 57/86 (66%), Positives = 67/86 (77%)
Frame = +3
Query: 102 KRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKR 281
KRTKK GI GKYGTRYGASLRK +KKMEV+QH+KY C FCGK A+KR VGIW CK C +
Sbjct: 33 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGK 92
Query: 282 TVAGGAWVFSTTAASSCRSAVRRLRE 359
AGGA+ +T +A + RS +RRLRE
Sbjct: 93 VKAGGAYTMNTASAVTVRSTIRRLRE 118
>07_01_0479 + 3606663-3607448
Length = 261
Score = 34.7 bits (76), Expect = 0.096
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +2
Query: 671 PNPPGXARLPYWGAPSX--SXPX*TPLPPGPXXLAXQPVSPXLQRPXXPGXPP 823
P P +P+ P + P P PPGP P+ P RP PG PP
Sbjct: 177 PMRPPQMPIPFQRPPGVPPAFPGGPPPPPGPFMRGPPPMGPPQVRPGMPGGPP 229
>02_04_0536 + 23730396-23731736
Length = 446
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +2
Query: 680 PGXARLPYWGAPSXSXPX*TPLPPGP-XXLAXQPV--SPXLQRPXXPGXPP 823
PG A P + AP+ P PP P LA +PV +P + P PG PP
Sbjct: 107 PGLADEPVYAAPARHLPPPPGFPPLPVPGLADEPVYAAPARRLPPPPGFPP 157
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 32.7 bits (71), Expect = 0.39
Identities = 22/59 (37%), Positives = 22/59 (37%)
Frame = +2
Query: 671 PNPPGXARLPYWGAPSXSXPX*TPLPPGPXXLAXQPVSPXLQRPXXPGXPPXXXXXXPP 847
P PP P PS S P PLPP P A P P L P PP PP
Sbjct: 1137 PPPPPLPEGPP-PLPSDSPPCQPPLPPSPPP-ATPPPPPPLSPSLPPPPPPPPLPSGPP 1193
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/59 (35%), Positives = 21/59 (35%)
Frame = +2
Query: 671 PNPPGXARLPYWGAPSXSXPX*TPLPPGPXXLAXQPVSPXLQRPXXPGXPPXXXXXXPP 847
P P G LP P PLP GP L SP Q P P PP PP
Sbjct: 1124 PLPDGPPPLP------LDAPPPPPLPEGPPPLPSD--SPPCQPPLPPSPPPATPPPPPP 1174
>12_02_1174 - 26696869-26698191
Length = 440
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Frame = +2
Query: 671 PNPPGXARLPYWGAPSXSXPX*TPLPPGP----XXLAXQPVSPXLQRPXXPGXPP 823
P P ++P P S P +PLPP P A P P +P P PP
Sbjct: 249 PPPRAPVKMPRVLEPKPSPPPPSPLPPPPEDYWSPTAVTPPEPTKPKPPPPSPPP 303
>01_01_0975 -
7686297-7686458,7687117-7687245,7687754-7687831,
7688011-7688469,7690648-7690788,7691771-7692421
Length = 539
Score = 31.5 bits (68), Expect = 0.89
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Frame = +2
Query: 671 PNPPGXARLPY--WGAPSXSX-PX*TPLPPGPXXLAXQPVSPXLQRPXXPGXPP 823
P+PP R P WG P+ P PP P A P+ P R P PP
Sbjct: 339 PHPPPFCRPPLHVWGHPTAGVEPTTAAAPPPPSPHAQPPLLPVWPRHLAPPPPP 392
>01_01_0046 - 331758-332627
Length = 289
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = +2
Query: 677 PPGXARLPYWGAPSXSXPX*TPLPPGPXXLAXQPVSPXLQRPXXPGXP 820
PP PYW +P P P PP P +P SP R P P
Sbjct: 9 PPQRYWFPYWTSPPPPPP---PPPPPPSSSRYRPPSPPSSRHPHPTIP 53
>07_03_1160 - 24430240-24431268
Length = 342
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/59 (30%), Positives = 21/59 (35%)
Frame = +2
Query: 671 PNPPGXARLPYWGAPSXSXPX*TPLPPGPXXLAXQPVSPXLQRPXXPGXPPXXXXXXPP 847
P+ P + P PS P+P GP QP P P P PP PP
Sbjct: 209 PSVPDQSTQPNPNGPSIPNQPPQPIPNGPIK-PDQPPQPNPDMPPKPDQPPQPCPDGPP 266
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = +2
Query: 671 PNPPGXARLPYWGAPSXSXPX*TPLPPGPXXLAXQPVSPXLQRPXXPGXPPXXXXXXPP 847
P P G P APS P P GP + QP P P P PP PP
Sbjct: 198 PKPDGS---PNSYAPSVPDQSTQPNPNGPS-IPNQPPQPIPNGPIKPDQPPQPNPDMPP 252
>08_01_0059 - 394001-394708
Length = 235
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = +2
Query: 671 PNPPGXARLPYWGAPSXSXPX*TPLPPGPXXLAXQPVSPXLQRPXXPGXPPXXXXXXPP 847
P PP R P A P P PP P +P P RP P P PP
Sbjct: 2 PPPPPPRRAPPPPATPPPPPRRAPPPPSP---PIRPPPPPTPRPYAPPPPSHPLAPPPP 57
>07_03_0481 -
18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 219 CGKDAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAASSCRSAVRRLR 356
C +KR+ G W C RC+ + + A +S R RR+R
Sbjct: 58 CLNPPLKRAPPGNWQCPRCRTKKVSLKLLDNADADTSKRERTRRMR 103
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +2
Query: 671 PNPPGXARLPYWGAPSXSXPX*TPLPPGPXXLAXQPVSPXLQRPXXP 811
P PP A + GAP P P PPGP P L P P
Sbjct: 234 PPPPKPANIA--GAPGLPLPPPPPPPPGPPPREIVPGQTLLPPPPPP 278
>11_04_0307 +
16185405-16185713,16185847-16185942,16186626-16186730,
16186938-16187090,16188395-16188478,16188566-16188694,
16188986-16189165,16189555-16189677,16189678-16189794,
16189889-16190053
Length = 486
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +2
Query: 680 PGXARLPYWGAP--SXSXPX*TPLPPGPXXLAXQPVSPXLQRPXXPGXPP 823
P P W AP S S P P+PP P P P +P PP
Sbjct: 10 PEWLNSPLWSAPPPSSSSPS-PPVPPDPYGADLSPPPPPPPKPPPTVPPP 58
>10_08_0425 -
17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 671 PNPPGXARLPYWGAPSXS 724
PNPPG RLP+ G P S
Sbjct: 238 PNPPGSIRLPFPGPPRPS 255
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,397,316
Number of Sequences: 37544
Number of extensions: 363619
Number of successful extensions: 1055
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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