Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_I12
         (848 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC5H10.12c |||acetylglucosaminyltransferase|Schizosaccharomyce...    27   4.4  
SPCC31H12.02c |mug73||membrane transporter |Schizosaccharomyces ...    27   4.4  
SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces pom...    26   5.9  
SPBC1198.08 |||dipeptidase Dug1 |Schizosaccharomyces pombe|chr 2...    26   7.8  

>SPAC5H10.12c |||acetylglucosaminyltransferase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 371

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 11/49 (22%), Positives = 25/49 (51%)
 Frame = -2

Query: 652 FGIIYLSSVVVLAKSVIIIKNYNMTIEPKIMFKHKISINYSRISTTAGP 506
           F  I    + V+   ++I+KN +   +   M++   ++NY+R+ +   P
Sbjct: 167 FEQIQFDKICVIDSDILIMKNIDDIFDTPYMYQQINTLNYTRLPSYTKP 215


>SPCC31H12.02c |mug73||membrane transporter |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 306

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = -2

Query: 721 LLYIVNCQTFVXVKLRIDQYXW-FFGIIYLSSVVVLAKSVIIIKNYNMTIEPKIMFKHKI 545
           +L+ + C   +   L    Y W ++G  ++   + LA SV++ K Y   +E         
Sbjct: 135 VLFAIVC--LLAAALTSSPYKWAYYGFSFVGYFIALAHSVVLHKKYASRLETSARLGFLW 192

Query: 544 SINYSRI 524
           SI Y  +
Sbjct: 193 SIVYLHV 199


>SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 592

 Score = 26.2 bits (55), Expect = 5.9
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 825 ILIYXXNKHXXXXKSITKPLHTLICI*HNTY 733
           ++ Y  N H      +  PLHTL CI  + Y
Sbjct: 534 LMTYFLNYHPEDIIDVGLPLHTLFCIESDRY 564


>SPBC1198.08 |||dipeptidase Dug1 |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 474

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 641 NNPEKPTILIYSQFD 685
           N+P K T+LIY+ FD
Sbjct: 85  NDPSKKTVLIYNHFD 99


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,039,346
Number of Sequences: 5004
Number of extensions: 59435
Number of successful extensions: 138
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 138
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)