Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_I12
         (848 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0671 + 10315260-10315370,10315984-10316027,10316141-103162...    30   2.0  
04_01_0360 - 4720997-4721812                                           30   2.7  

>03_02_0671 +
           10315260-10315370,10315984-10316027,10316141-10316204,
           10316278-10316392,10316504-10316571,10316917-10317014,
           10317543-10317657,10318425-10318641,10319541-10319667,
           10319803-10319857,10319997-10320093,10320748-10320876,
           10320964-10321097,10321660-10321746,10321998-10322069,
           10322320-10322359,10322535-10322779,10323587-10323764,
           10323931-10324136,10324681-10324977
          Length = 832

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 11/18 (61%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
 Frame = -2

Query: 142 LRWCWERQE-LPRLKHTT 92
           +RWCWE  E LPR+K T+
Sbjct: 426 IRWCWEESERLPRMKSTS 443


>04_01_0360 - 4720997-4721812
          Length = 271

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 187 STRSHEDARAGLSGHLRWCWERQELPRLKHTT 92
           + R  E  R G  G+ +W +  ++ PRL H T
Sbjct: 204 AARERESKRLGFEGYAQWAYFFEKAPRLPHIT 235


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,268,460
Number of Sequences: 37544
Number of extensions: 382348
Number of successful extensions: 1006
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)