Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_I11
         (886 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0498 + 3734498-3734976,3736176-3736800                           30   2.8  
07_01_0724 + 5529642-5531141                                           29   5.0  
02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628,677...    28   8.7  

>07_01_0498 + 3734498-3734976,3736176-3736800
          Length = 367

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 481 DVGSVSDYGVIGRVAQVIVDALPFLAVGGLARKV 380
           D    +D GV+  +A  +VD   FLA GG+ R V
Sbjct: 26  DEAPAADDGVVEEIAIPVVDLAAFLASGGIGRDV 59


>07_01_0724 + 5529642-5531141
          Length = 499

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = +2

Query: 500 SGPCSSYIDVCCLAPDQRXPTDPITPRPEXLPMNQGCGWRXP 625
           + P ++++   C A D+    DP + RP+ + ++   GW  P
Sbjct: 122 AAPFAAFLADACAAGDREGRPDPFSRRPDWVVVDFAHGWLPP 163


>02_02_0099 +
           6768115-6768285,6769950-6770034,6770501-6770628,
           6771429-6771465,6773108-6774193,6774337-6774447,
           6774701-6774817,6774818-6775120,6776092-6776513,
           6776645-6777274
          Length = 1029

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
 Frame = -3

Query: 305 SCVGGFADV-KI*LMIDSRSPVSMFCAHAAARKPMSRSLYIFGYYSQNITLTISNSQCSS 129
           S VG   DV +  L  D + P+ +  A            ++FG+YS+ +T TI +   ++
Sbjct: 310 SAVGVLIDVDEESLEGDHKEPIKLKVALRGVDASPFSCHFVFGWYSRCVTFTIEDKAQTT 369

Query: 128 *SNRF*DFPCTRQGQPGPARDGYHKQDSNLKEFP 27
              R     C  +  P      Y+ +   L E P
Sbjct: 370 ECEREVLEDCNGEDHPDEFGKEYNNKTDKLIEMP 403


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,895,153
Number of Sequences: 37544
Number of extensions: 429531
Number of successful extensions: 1074
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)