Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_I06
(905 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.007
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.007
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.007
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.16
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.16
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.16
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.21
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.86
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.86
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 0.86
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.6
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.6
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 25 3.2
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 3.5
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 6.0
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 6.0
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 6.0
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 28 8.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.0
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 8.0
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 38.3 bits (85), Expect = 0.007
Identities = 27/102 (26%), Positives = 30/102 (29%)
Frame = +2
Query: 254 PKXXXXPPPXXKKXGPXKXXXGXPPPPXXXXXXTPXXPPXXPXXXXXXPXQXPXXXPXXX 433
P PPP P G PPPP P P P P Q P
Sbjct: 266 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 325
Query: 434 XXGXXGXXPXAPXXXXKKTPXAAPXAXREXXXSPXPGRPXPR 559
P P ++ P +P SP GRP PR
Sbjct: 326 TGS-----PPPPPRQKRQAPERSPPTGSPPTGSPPTGRP-PR 361
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = +2
Query: 254 PKXXXXPPPXXKKXGPXKXXXGXPPPPXXXXXXTPXXPPXXPXXXXXXPXQXP 412
P PPP K P G PPPP P P P P
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Score = 29.1 bits (62), Expect = 4.6
Identities = 24/112 (21%), Positives = 27/112 (24%), Gaps = 1/112 (0%)
Frame = +1
Query: 274 PPXXKKXGPPXKXXGXPPPXXXXXXXDXXXXPXPPXXXXXXTPXXAPXPXXXXXXGXKXX 453
PP G P PP P PP P +P
Sbjct: 298 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG 357
Query: 454 XPPRXXPPXKKNPXRGSXRG-AGXXXFPPXGXAXXAARXGXXXGRRXXGPRR 606
PPR P S G G P G ++ GPRR
Sbjct: 358 RPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRR 409
Score = 28.3 bits (60), Expect = 8.0
Identities = 33/154 (21%), Positives = 36/154 (23%), Gaps = 4/154 (2%)
Frame = +3
Query: 273 PPPXXKXGAPXKXXGXXPPXPXXXXXRX--RXXPPPXPXXXXXXPXXRPXPXXXQXTXXK 446
PPP K P G PP P PPP P P P +
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 447 XXPXPXXXXXXXXXXXXXXXXXX--GXXXXPPXRXGRXRGXXGRXXRPXXGXXPXGGXPX 620
P P PP + R R P G P G P
Sbjct: 299 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERS--PPTGSPPTGSPPT 356
Query: 621 XXXXPPXXTXGATEGXXXRXXPRAXPXXRPPXPP 722
+ E R PR P P P
Sbjct: 357 GRPPRGGPGKSSEESSESREGPRGGPRGGPRGGP 390
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 38.3 bits (85), Expect = 0.007
Identities = 27/102 (26%), Positives = 30/102 (29%)
Frame = +2
Query: 254 PKXXXXPPPXXKKXGPXKXXXGXPPPPXXXXXXTPXXPPXXPXXXXXXPXQXPXXXPXXX 433
P PPP P G PPPP P P P P Q P
Sbjct: 287 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 346
Query: 434 XXGXXGXXPXAPXXXXKKTPXAAPXAXREXXXSPXPGRPXPR 559
P P ++ P +P SP GRP PR
Sbjct: 347 TGS-----PPPPPRQKRQAPERSPPTGSPPTGSPPTGRP-PR 382
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = +2
Query: 254 PKXXXXPPPXXKKXGPXKXXXGXPPPPXXXXXXTPXXPPXXPXXXXXXPXQXP 412
P PPP K P G PPPP P P P P
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Score = 29.1 bits (62), Expect = 4.6
Identities = 24/112 (21%), Positives = 27/112 (24%), Gaps = 1/112 (0%)
Frame = +1
Query: 274 PPXXKKXGPPXKXXGXPPPXXXXXXXDXXXXPXPPXXXXXXTPXXAPXPXXXXXXGXKXX 453
PP G P PP P PP P +P
Sbjct: 319 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG 378
Query: 454 XPPRXXPPXKKNPXRGSXRG-AGXXXFPPXGXAXXAARXGXXXGRRXXGPRR 606
PPR P S G G P G ++ GPRR
Sbjct: 379 RPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRR 430
Score = 28.3 bits (60), Expect = 8.0
Identities = 33/154 (21%), Positives = 36/154 (23%), Gaps = 4/154 (2%)
Frame = +3
Query: 273 PPPXXKXGAPXKXXGXXPPXPXXXXXRX--RXXPPPXPXXXXXXPXXRPXPXXXQXTXXK 446
PPP K P G PP P PPP P P P +
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 447 XXPXPXXXXXXXXXXXXXXXXXX--GXXXXPPXRXGRXRGXXGRXXRPXXGXXPXGGXPX 620
P P PP + R R P G P G P
Sbjct: 320 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERS--PPTGSPPTGSPPT 377
Query: 621 XXXXPPXXTXGATEGXXXRXXPRAXPXXRPPXPP 722
+ E R PR P P P
Sbjct: 378 GRPPRGGPGKSSEESSESREGPRGGPRGGPRGGP 411
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 38.3 bits (85), Expect = 0.007
Identities = 27/102 (26%), Positives = 30/102 (29%)
Frame = +2
Query: 254 PKXXXXPPPXXKKXGPXKXXXGXPPPPXXXXXXTPXXPPXXPXXXXXXPXQXPXXXPXXX 433
P PPP P G PPPP P P P P Q P
Sbjct: 272 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 331
Query: 434 XXGXXGXXPXAPXXXXKKTPXAAPXAXREXXXSPXPGRPXPR 559
P P ++ P +P SP GRP PR
Sbjct: 332 TGS-----PPPPPRQKRQAPERSPPTGSPPTGSPPTGRP-PR 367
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = +2
Query: 254 PKXXXXPPPXXKKXGPXKXXXGXPPPPXXXXXXTPXXPPXXPXXXXXXPXQXP 412
P PPP K P G PPPP P P P P
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Score = 29.1 bits (62), Expect = 4.6
Identities = 24/112 (21%), Positives = 27/112 (24%), Gaps = 1/112 (0%)
Frame = +1
Query: 274 PPXXKKXGPPXKXXGXPPPXXXXXXXDXXXXPXPPXXXXXXTPXXAPXPXXXXXXGXKXX 453
PP G P PP P PP P +P
Sbjct: 304 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG 363
Query: 454 XPPRXXPPXKKNPXRGSXRG-AGXXXFPPXGXAXXAARXGXXXGRRXXGPRR 606
PPR P S G G P G ++ GPRR
Sbjct: 364 RPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRR 415
Score = 28.3 bits (60), Expect = 8.0
Identities = 33/154 (21%), Positives = 36/154 (23%), Gaps = 4/154 (2%)
Frame = +3
Query: 273 PPPXXKXGAPXKXXGXXPPXPXXXXXRX--RXXPPPXPXXXXXXPXXRPXPXXXQXTXXK 446
PPP K P G PP P PPP P P P +
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 447 XXPXPXXXXXXXXXXXXXXXXXX--GXXXXPPXRXGRXRGXXGRXXRPXXGXXPXGGXPX 620
P P PP + R R P G P G P
Sbjct: 305 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERS--PPTGSPPTGSPPT 362
Query: 621 XXXXPPXXTXGATEGXXXRXXPRAXPXXRPPXPP 722
+ E R PR P P P
Sbjct: 363 GRPPRGGPGKSSEESSESREGPRGGPRGGPRGGP 396
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +3
Query: 273 PPPXXKXGAPXKXXGXXPPXPXXXXXRXRXXPPPXPXXXXXXPXXRPXPXXXQXTXXKXX 452
PPP G P G PP P PPP P P P P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 453 PXP 461
P P
Sbjct: 787 PPP 789
Score = 32.7 bits (71), Expect = 0.37
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +2
Query: 254 PKXXXXPPPXXKKXGPXKXXXGXPPPPXXXXXXTPXXPPXXPXXXXXXPXQXP 412
P PPP G G PPPP P PP P P P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/63 (26%), Positives = 17/63 (26%)
Frame = +1
Query: 274 PPXXKKXGPPXKXXGXPPPXXXXXXXDXXXXPXPPXXXXXXTPXXAPXPXXXXXXGXKXX 453
PP G P G PPP P PP P P P G
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 454 XPP 462
PP
Sbjct: 787 PPP 789
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +3
Query: 273 PPPXXKXGAPXKXXGXXPPXPXXXXXRXRXXPPPXPXXXXXXPXXRPXP 419
PPP G G PP P PPP P P P P
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +3
Query: 273 PPPXXKXGAPXKXXGXXPPXPXXXXXRXRXXPPPXPXXXXXXPXXRPXPXXXQXTXXKXX 452
PPP G P G PP P PPP P P P P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 453 PXP 461
P P
Sbjct: 787 PPP 789
Score = 32.7 bits (71), Expect = 0.37
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +2
Query: 254 PKXXXXPPPXXKKXGPXKXXXGXPPPPXXXXXXTPXXPPXXPXXXXXXPXQXP 412
P PPP G G PPPP P PP P P P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/63 (26%), Positives = 17/63 (26%)
Frame = +1
Query: 274 PPXXKKXGPPXKXXGXPPPXXXXXXXDXXXXPXPPXXXXXXTPXXAPXPXXXXXXGXKXX 453
PP G P G PPP P PP P P P G
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 454 XPP 462
PP
Sbjct: 787 PPP 789
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +3
Query: 273 PPPXXKXGAPXKXXGXXPPXPXXXXXRXRXXPPPXPXXXXXXPXXRPXP 419
PPP G G PP P PPP P P P P
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +3
Query: 273 PPPXXKXGAPXKXXGXXPPXPXXXXXRXRXXPPPXPXXXXXXPXXRPXPXXXQXTXXKXX 452
PPP G P G PP P PPP P P P P
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Query: 453 PXP 461
P P
Sbjct: 370 PPP 372
Score = 32.7 bits (71), Expect = 0.37
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +2
Query: 254 PKXXXXPPPXXKKXGPXKXXXGXPPPPXXXXXXTPXXPPXXPXXXXXXPXQXP 412
P PPP G G PPPP P PP P P P
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/63 (26%), Positives = 17/63 (26%)
Frame = +1
Query: 274 PPXXKKXGPPXKXXGXPPPXXXXXXXDXXXXPXPPXXXXXXTPXXAPXPXXXXXXGXKXX 453
PP G P G PPP P PP P P P G
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Query: 454 XPP 462
PP
Sbjct: 370 PPP 372
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +3
Query: 273 PPPXXKXGAPXKXXGXXPPXPXXXXXRXRXXPPPXPXXXXXXPXXRPXP 419
PPP G G PP P PPP P P P P
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.21
Identities = 39/166 (23%), Positives = 45/166 (27%), Gaps = 3/166 (1%)
Frame = +2
Query: 254 PKXXXXPPPXXKKXGPXKXXXGXPPPPXXXXXXTPXXPPXXPXXXXXXPXQXPXXXPXXX 433
P+ PPP GP G PP P P P Q P
Sbjct: 290 PQQFGGPPPS----GPPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQGPPQG--GP 343
Query: 434 XXGXXGXXPXAPXXXXKKTPXAAPXAXREXXXSPXPGRPXPRXXGAXVXAX---AXXXPX 604
G G P P +P + +P P P+ A A P
Sbjct: 344 PQGSFGAPP--PQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQ 401
Query: 605 GXXXXXGXXPPPXHXXGHGGXXGXXRAPRXXXGAPXPPAXPXXXTP 742
G G PPP G G G + G P PP P P
Sbjct: 402 GPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFG-PPPPGGPGAYGP 446
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 31.5 bits (68), Expect = 0.86
Identities = 23/69 (33%), Positives = 23/69 (33%), Gaps = 3/69 (4%)
Frame = +2
Query: 530 SPXPGRPXPRXXGAXVXAXAXXXPXGXXXXXGXXPPPXHXXGHGGXXG---XXRAPRXXX 700
SP P RP P G G G PPP G GG R P
Sbjct: 764 SPVP-RPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSN 822
Query: 701 GAPXPPAXP 727
GAP PA P
Sbjct: 823 GAPEIPARP 831
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.86
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +2
Query: 272 PPPXXKKXGPXKXXXGXPPPPXXXXXXTPXXPPXXPXXXXXXPXQXPXXXP 424
PPP + GP PPPP PP P P P P
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 368
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/76 (30%), Positives = 23/76 (30%), Gaps = 5/76 (6%)
Frame = +3
Query: 531 PPXRXGRXRGXXGRXXRPXXGXXPXGGXPXXXXXPPXXTXGATE--GXXXRXXPR---AX 695
PP GR G G P G P PP G G PR A
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 359
Query: 696 PXXRPPXPPXPXXKPP 743
P PP PP PP
Sbjct: 360 PGMYPPPPPSRPPAPP 375
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.86
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +2
Query: 272 PPPXXKKXGPXKXXXGXPPPPXXXXXXTPXXPPXXPXXXXXXPXQXPXXXP 424
PPP + GP PPPP PP P P P P
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 378
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/76 (30%), Positives = 23/76 (30%), Gaps = 5/76 (6%)
Frame = +3
Query: 531 PPXRXGRXRGXXGRXXRPXXGXXPXGGXPXXXXXPPXXTXGATE--GXXXRXXPR---AX 695
PP GR G G P G P PP G G PR A
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 369
Query: 696 PXXRPPXPPXPXXKPP 743
P PP PP PP
Sbjct: 370 PGMYPPPPPSRPPAPP 385
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.5 bits (68), Expect = 0.86
Identities = 23/69 (33%), Positives = 23/69 (33%), Gaps = 3/69 (4%)
Frame = +2
Query: 530 SPXPGRPXPRXXGAXVXAXAXXXPXGXXXXXGXXPPPXHXXGHGGXXG---XXRAPRXXX 700
SP P RP P G G G PPP G GG R P
Sbjct: 764 SPVP-RPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSN 822
Query: 701 GAPXPPAXP 727
GAP PA P
Sbjct: 823 GAPEIPARP 831
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/66 (30%), Positives = 20/66 (30%)
Frame = +2
Query: 530 SPXPGRPXPRXXGAXVXAXAXXXPXGXXXXXGXXPPPXHXXGHGGXXGXXRAPRXXXGAP 709
SP P RP P G G G PPP G GG R G P
Sbjct: 764 SPVP-RPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGP 822
Query: 710 XPPAXP 727
P P
Sbjct: 823 PPNMAP 828
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/66 (30%), Positives = 20/66 (30%)
Frame = +2
Query: 530 SPXPGRPXPRXXGAXVXAXAXXXPXGXXXXXGXXPPPXHXXGHGGXXGXXRAPRXXXGAP 709
SP P RP P G G G PPP G GG R G P
Sbjct: 764 SPVP-RPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGP 822
Query: 710 XPPAXP 727
P P
Sbjct: 823 PPNMAP 828
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 25.4 bits (53), Expect(2) = 3.2
Identities = 15/58 (25%), Positives = 16/58 (27%)
Frame = +2
Query: 554 PRXXGAXVXAXAXXXPXGXXXXXGXXPPPXHXXGHGGXXGXXRAPRXXXGAPXPPAXP 727
P G V P G G P H G P+ GAP P P
Sbjct: 264 PGAPGQVVDVPGAPGPAGPPGPPGPSGAPGHPGQAGSSLPGAPGPQGDAGAPGQPGAP 321
Score = 22.6 bits (46), Expect(2) = 3.2
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 482 KKTPXAAPXAXREXXXSPXPGRPXP 556
+K P AP A + S PG P P
Sbjct: 221 QKGPSGAPGAPGQSGGSALPGPPGP 245
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 856 PXPPXPTXXXPPPPP 900
P PP PT PPPPP
Sbjct: 88 PPPPPPTLKAPPPPP 102
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 273 PPPXXKXGAPXKXXGXXPPXPXXXXXRXRXXPPPXP 380
PPP AP G PP P PPP P
Sbjct: 218 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPP 253
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 273 PPPXXKXGAPXKXXGXXPPXPXXXXXRXRXXPPPXP 380
PPP AP G PP P PPP P
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPP 239
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 273 PPPXXKXGAPXKXXGXXPPXPXXXXXRXRXXPPPXP 380
PPP AP G PP P PPP P
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPP 239
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.3 bits (60), Expect = 8.0
Identities = 35/168 (20%), Positives = 39/168 (23%), Gaps = 4/168 (2%)
Frame = +2
Query: 254 PKXXXXPPPXXKKXGPXKXXXGXPPPPXXXXXXTPXXPPXXPXXXXXXPXQXPXXXPXXX 433
P P P P G PP P P P P P P
Sbjct: 251 PPSGGPPGPFNPSGAPPS---GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDP 307
Query: 434 XXGXXGXXPXAPXXXXKKTPXAAPXAXREXXXSPXPGRPXPRXXGAXVXAXAXXXPXGXX 613
P P P P + +P G P + A P G
Sbjct: 308 SGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPS--GAPPSGGPPGPF 365
Query: 614 XXXGXXP---PPXHXXGHGG-XXGXXRAPRXXXGAPXPPAXPXXXTPT 745
G P PP G G P GAP P P+
Sbjct: 366 DPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPS 413
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 8.0
Identities = 24/98 (24%), Positives = 27/98 (27%)
Frame = +2
Query: 449 GXXPXAPXXXXKKTPXAAPXAXREXXXSPXPGRPXPRXXGAXVXAXAXXXPXGXXXXXGX 628
G P P + P A P + PG P P G V A G
Sbjct: 68 GYPPPYPYQHPHQPPPAHPHHLQHPHPYAYPGYPVPGQEGHQVPA----PQHGDHEASPP 123
Query: 629 XPPPXHXXGHGGXXGXXRAPRXXXGAPXPPAXPXXXTP 742
PPP GG P P P + P P
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPP 161
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = +2
Query: 254 PKXXXXPPPXXKKXGPXKXXXGXPPPPXXXXXXTPXXPPXXPXXXXXXPXQXP 412
P PPP P PPPP P PP P P P
Sbjct: 34 PPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,581,946
Number of Sequences: 27780
Number of extensions: 190394
Number of successful extensions: 1573
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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