BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_I04
(905 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino pro... 36 0.058
BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p pro... 36 0.076
BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p pro... 36 0.076
AE014298-9|AAX52465.1| 193|Drosophila melanogaster CG13376-PA p... 34 0.31
AY119486-1|AAM50140.1| 1049|Drosophila melanogaster GH07742p pro... 31 1.6
AE014134-691|AAF51054.1| 1059|Drosophila melanogaster CG3399-PA,... 31 1.6
AE014134-690|AAN10367.1| 1049|Drosophila melanogaster CG3399-PB,... 31 1.6
AE014134-689|AAF51053.2| 1207|Drosophila melanogaster CG3399-PD,... 31 1.6
AE014134-688|AAN10366.1| 1154|Drosophila melanogaster CG3399-PC,... 31 1.6
AY075448-1|AAL68261.2| 218|Drosophila melanogaster RE09269p pro... 31 2.2
AE014298-2797|AAF48914.2| 193|Drosophila melanogaster CG14191-P... 31 2.2
AE014297-426|AAF51896.2| 171|Drosophila melanogaster CG15597-PA... 31 2.2
X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous ... 31 2.9
X59691-1|CAA42212.1| 386|Drosophila melanogaster P11 (hnRNP pro... 30 3.8
X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin pr... 30 5.0
AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA... 30 5.0
AE014296-3444|AAF51657.1| 98|Drosophila melanogaster CG11458-P... 29 6.6
BT004875-1|AAO45231.1| 399|Drosophila melanogaster LD22761p pro... 29 8.8
BT004476-1|AAO42640.1| 286|Drosophila melanogaster LP07342p pro... 29 8.8
AY051892-1|AAK93316.1| 349|Drosophila melanogaster LD38046p pro... 29 8.8
AE014298-2351|AAN09389.1| 399|Drosophila melanogaster CG3606-PB... 29 8.8
AE014298-2350|AAF48578.2| 399|Drosophila melanogaster CG3606-PA... 29 8.8
AE014298-1424|AAF46566.2| 349|Drosophila melanogaster CG2961-PA... 29 8.8
AE014297-4048|AAF56656.1| 286|Drosophila melanogaster CG5812-PA... 29 8.8
>U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino
protein.
Length = 1058
Score = 36.3 bits (80), Expect = 0.058
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +1
Query: 787 PXXPXPXAXFXXPPXPXPXHPSFIXITXXXSXPPPPTPP 903
P P P F PP P P P + + PPPP PP
Sbjct: 488 PPPPPPLPAFVAPPPPPPPPPPPPPLANYGAPPPPPPPP 526
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 802 PXAXFXXPPXPXPXHPSFIXITXXXSXPPPPTP 900
P A PP P P P+F+ PPPP P
Sbjct: 480 PHAVAPPPPPPPPPLPAFVAPPPPPPPPPPPPP 512
>BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p
protein.
Length = 1153
Score = 35.9 bits (79), Expect = 0.076
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +1
Query: 787 PXXPXPXAXFXXPPXPXPXHPSFIXITXXXSXPPPPTPP 903
P P P F PP P P P + + PPPP PP
Sbjct: 583 PPPPPPLPAFVAPPPPPPPPPPPPPMANYGAPPPPPPPP 621
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 802 PXAXFXXPPXPXPXHPSFIXITXXXSXPPPPTP 900
P A PP P P P+F+ PPPP P
Sbjct: 575 PHAVAPPPPPPPPPLPAFVAPPPPPPPPPPPPP 607
>BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p
protein.
Length = 1286
Score = 35.9 bits (79), Expect = 0.076
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +1
Query: 787 PXXPXPXAXFXXPPXPXPXHPSFIXITXXXSXPPPPTPP 903
P P P F PP P P P + + PPPP PP
Sbjct: 716 PPPPPPLPAFVAPPPPPPPPPPPPPMANYGAPPPPPPPP 754
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 802 PXAXFXXPPXPXPXHPSFIXITXXXSXPPPPTP 900
P A PP P P P+F+ PPPP P
Sbjct: 708 PHAVAPPPPPPPPPLPAFVAPPPPPPPPPPPPP 740
>AE014298-9|AAX52465.1| 193|Drosophila melanogaster CG13376-PA
protein.
Length = 193
Score = 33.9 bits (74), Expect = 0.31
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = -1
Query: 905 GGG--VGGGGXXXXXVXWIKXGXXGMGXGGXXNXAXGWGXXGYXXXWMGWRGEGDGXVG 735
GGG GGGG V IK G G GG GW G W G G G
Sbjct: 94 GGGWSSGGGGGSGSDVKLIKIISLGGGGGGHSGGGGGWSSGGGGGGWSSGGSGGHGSSG 152
Score = 33.5 bits (73), Expect = 0.41
Identities = 25/75 (33%), Positives = 27/75 (36%)
Frame = -1
Query: 905 GGGVGGGGXXXXXVXWIKXGXXGMGXGGXXNXAXGWGXXGYXXXWMGWRGEGDGXVGIVS 726
GGG GGGG + G G G GG + G G G GW G G G S
Sbjct: 36 GGGHGGGGDVQIIKVITESGSSGGGGGGGGWSSGGGGGGG------GWSSGGGGGGGGWS 89
Query: 725 XRXXXGDXXXGTGSG 681
G G G G
Sbjct: 90 SGGGGGGWSSGGGGG 104
Score = 32.3 bits (70), Expect = 0.94
Identities = 26/82 (31%), Positives = 28/82 (34%), Gaps = 6/82 (7%)
Frame = -1
Query: 905 GGGVGGGGXXXXXVXWIKXGXXGMGX--GGXXNXAXGWGXXGYXXXWMGWRGEGDG---- 744
GGG GGGG W G G G G GW G W G G G
Sbjct: 58 GGGGGGGG-------WSSGGGGGGGGWSSGGGGGGGGWSSGGGGGGWSSGGGGGSGSDVK 110
Query: 743 XVGIVSXRXXXGDXXXGTGSGW 678
+ I+S G G G GW
Sbjct: 111 LIKIISL-GGGGGGHSGGGGGW 131
>AY119486-1|AAM50140.1| 1049|Drosophila melanogaster GH07742p
protein.
Length = 1049
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +1
Query: 787 PXXPXPXAXFXXPPXPXPXHPSFIXITXXXSXPPPPTPP 903
P P A PP P P P + + PPPP PP
Sbjct: 479 PPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPP 517
Score = 30.7 bits (66), Expect = 2.9
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 802 PXAXFXXPPXPXPXHPSFIXITXXXSXPPPPTPP 903
P A PP P P +F+ PPPP PP
Sbjct: 470 PHAVAPPPPPPPPPLHAFVAPPPPPPPPPPPPPP 503
>AE014134-691|AAF51054.1| 1059|Drosophila melanogaster CG3399-PA,
isoform A protein.
Length = 1059
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +1
Query: 787 PXXPXPXAXFXXPPXPXPXHPSFIXITXXXSXPPPPTPP 903
P P A PP P P P + + PPPP PP
Sbjct: 489 PPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPP 527
Score = 30.7 bits (66), Expect = 2.9
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 802 PXAXFXXPPXPXPXHPSFIXITXXXSXPPPPTPP 903
P A PP P P +F+ PPPP PP
Sbjct: 480 PHAVAPPPPPPPPPLHAFVAPPPPPPPPPPPPPP 513
>AE014134-690|AAN10367.1| 1049|Drosophila melanogaster CG3399-PB,
isoform B protein.
Length = 1049
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +1
Query: 787 PXXPXPXAXFXXPPXPXPXHPSFIXITXXXSXPPPPTPP 903
P P A PP P P P + + PPPP PP
Sbjct: 479 PPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPP 517
Score = 30.7 bits (66), Expect = 2.9
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 802 PXAXFXXPPXPXPXHPSFIXITXXXSXPPPPTPP 903
P A PP P P +F+ PPPP PP
Sbjct: 470 PHAVAPPPPPPPPPLHAFVAPPPPPPPPPPPPPP 503
>AE014134-689|AAF51053.2| 1207|Drosophila melanogaster CG3399-PD,
isoform D protein.
Length = 1207
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +1
Query: 787 PXXPXPXAXFXXPPXPXPXHPSFIXITXXXSXPPPPTPP 903
P P A PP P P P + + PPPP PP
Sbjct: 637 PPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPP 675
Score = 30.7 bits (66), Expect = 2.9
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 802 PXAXFXXPPXPXPXHPSFIXITXXXSXPPPPTPP 903
P A PP P P +F+ PPPP PP
Sbjct: 628 PHAVAPPPPPPPPPLHAFVAPPPPPPPPPPPPPP 661
>AE014134-688|AAN10366.1| 1154|Drosophila melanogaster CG3399-PC,
isoform C protein.
Length = 1154
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +1
Query: 787 PXXPXPXAXFXXPPXPXPXHPSFIXITXXXSXPPPPTPP 903
P P A PP P P P + + PPPP PP
Sbjct: 584 PPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPP 622
Score = 30.7 bits (66), Expect = 2.9
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 802 PXAXFXXPPXPXPXHPSFIXITXXXSXPPPPTPP 903
P A PP P P +F+ PPPP PP
Sbjct: 575 PHAVAPPPPPPPPPLHAFVAPPPPPPPPPPPPPP 608
>AY075448-1|AAL68261.2| 218|Drosophila melanogaster RE09269p
protein.
Length = 218
Score = 31.1 bits (67), Expect = 2.2
Identities = 21/77 (27%), Positives = 25/77 (32%), Gaps = 1/77 (1%)
Frame = -1
Query: 905 GGGVGGGGXXXXXVXWIKXGXXGMGXGGXXNXAXGWGXXGYXXXWMGWRGEGDG-XVGIV 729
GGG GG G G G G+G GY G G G G + I+
Sbjct: 46 GGGAGGSALSSGWSSGGGGGGYSGGYSGGHGGGGGYGGGGYGGGGYGGGGHGGGSTIKII 105
Query: 728 SXRXXXGDXXXGTGSGW 678
G G G G+
Sbjct: 106 KVITDSGAGGGGYGGGY 122
>AE014298-2797|AAF48914.2| 193|Drosophila melanogaster CG14191-PA
protein.
Length = 193
Score = 31.1 bits (67), Expect = 2.2
Identities = 21/77 (27%), Positives = 25/77 (32%), Gaps = 1/77 (1%)
Frame = -1
Query: 905 GGGVGGGGXXXXXVXWIKXGXXGMGXGGXXNXAXGWGXXGYXXXWMGWRGEGDG-XVGIV 729
GGG GG G G G G+G GY G G G G + I+
Sbjct: 21 GGGAGGSALSSGWSSGGGGGGYSGGYSGGHGGGGGYGGGGYGGGGYGGGGHGGGSTIKII 80
Query: 728 SXRXXXGDXXXGTGSGW 678
G G G G+
Sbjct: 81 KVITDSGAGGGGYGGGY 97
>AE014297-426|AAF51896.2| 171|Drosophila melanogaster CG15597-PA
protein.
Length = 171
Score = 31.1 bits (67), Expect = 2.2
Identities = 27/78 (34%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Frame = -1
Query: 905 GGGVGGGGXXXXX-VXWIKX-GXXGMGXGGXXNXAXGWGXXGYXXXWMGWRGEGDGXVGI 732
GGG GGGG V IK G G G A G+G GY + G G G G
Sbjct: 67 GGGYGGGGYGGESTVKVIKVITDSGAGGGYRGGYAGGYGG-GYGGGYGGAYGGGYGGGST 125
Query: 731 VSXRXXXGDXXXGTGSGW 678
V D G G G+
Sbjct: 126 VKIIKVITDSGSGYGGGY 143
>X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous
nuclear ribonucleoproteinprotein.
Length = 386
Score = 30.7 bits (66), Expect = 2.9
Identities = 24/83 (28%), Positives = 27/83 (32%)
Frame = -1
Query: 905 GGGVGGGGXXXXXVXWIKXGXXGMGXGGXXNXAXGWGXXGYXXXWMGWRGEGDGXVGIVS 726
GGG G GG + G G G G GWG W G G G G +
Sbjct: 200 GGGGGRGGP--------RAGGRG-GQGDRGQGGGGWGGQNRQNGGGNWGGRGGGG-GFGN 249
Query: 725 XRXXXGDXXXGTGSGWXXERATG 657
G G GW + TG
Sbjct: 250 SGGNFGGGQGGGSGGWNQQGGTG 272
>X59691-1|CAA42212.1| 386|Drosophila melanogaster P11 (hnRNP
protein) protein.
Length = 386
Score = 30.3 bits (65), Expect = 3.8
Identities = 24/83 (28%), Positives = 27/83 (32%)
Frame = -1
Query: 905 GGGVGGGGXXXXXVXWIKXGXXGMGXGGXXNXAXGWGXXGYXXXWMGWRGEGDGXVGIVS 726
GGG G GG + G G G G GWG W G G G G +
Sbjct: 200 GGGGGRGGP--------RAGGRG-GQGDRGQGGGGWGGQNRQNGGGNWGGAGGGG-GFGN 249
Query: 725 XRXXXGDXXXGTGSGWXXERATG 657
G G GW + TG
Sbjct: 250 SGGNFGGGQGGGSGGWNQQGGTG 272
>X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin
protein.
Length = 147
Score = 29.9 bits (64), Expect = 5.0
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -1
Query: 905 GGGVGGGGXXXXXVXWIKXGXXGMGXGGXXNXAXGWGXXG 786
GGG GGGG + G G G GG G G G
Sbjct: 67 GGGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRG 106
>AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA
protein.
Length = 344
Score = 29.9 bits (64), Expect = 5.0
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -1
Query: 905 GGGVGGGGXXXXXVXWIKXGXXGMGXGGXXNXAXGWGXXG 786
GGG GGGG + G G G GG G G G
Sbjct: 60 GGGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRG 99
>AE014296-3444|AAF51657.1| 98|Drosophila melanogaster CG11458-PA
protein.
Length = 98
Score = 29.5 bits (63), Expect = 6.6
Identities = 25/75 (33%), Positives = 25/75 (33%)
Frame = -1
Query: 905 GGGVGGGGXXXXXVXWIKXGXXGMGXGGXXNXAXGWGXXGYXXXWMGWRGEGDGXVGIVS 726
GGG GGGG W K G G G GG G G G G G G G
Sbjct: 21 GGGGGGGGGQGG---WQKNGGGG-GGGGQGGWQKGGGGGGGGKHGGGGGGGGKHGGGNGG 76
Query: 725 XRXXXGDXXXGTGSG 681
G G G G
Sbjct: 77 GGKHGGGGGGGGGGG 91
>BT004875-1|AAO45231.1| 399|Drosophila melanogaster LD22761p
protein.
Length = 399
Score = 29.1 bits (62), Expect = 8.8
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = -1
Query: 905 GGGVGGGGXXXXXVXWIKXGXXGMGXGGXXNXAXGWGXXGYXXXWMGWRGEGDGXVG 735
G G GGGG W G G GG + G GY G G G G G
Sbjct: 59 GSGNGGGGGGS----WNDRGGNSYGNGGASKDSYNKGHGGYSGGGGGGGGGGGGGSG 111
>BT004476-1|AAO42640.1| 286|Drosophila melanogaster LP07342p
protein.
Length = 286
Score = 29.1 bits (62), Expect = 8.8
Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
Frame = -1
Query: 905 GGGVGGG-GXXXXXVXWIKXGXXGMGXGGXXNXAXGWGXXGYXXXWMGWRGEGDGXVGIV 729
GGG GGG G + G G GG G+G G+ G G G G G +
Sbjct: 57 GGGFGGGFGGGSGGGGFSSGGGGGFSSGGGGGGGGGFG-GGFGGGSGGGSGGGFGGGGSI 115
Query: 728 SXRXXXGDXXXGT 690
G GT
Sbjct: 116 GGFGGGGGGGGGT 128
>AY051892-1|AAK93316.1| 349|Drosophila melanogaster LD38046p
protein.
Length = 349
Score = 29.1 bits (62), Expect = 8.8
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -1
Query: 905 GGGVGGGGXXXXXVXWIKXGXXGMGXGGXXNXAXGWGXXGYXXXWMGWRGEG 750
GGG GGGG I G G GG G G GY G G G
Sbjct: 25 GGGGGGGGGSKTTYNVIATPSSG-GGGGGGGGGGGGGGHGYSYAQGGGGGHG 75
>AE014298-2351|AAN09389.1| 399|Drosophila melanogaster CG3606-PB,
isoform B protein.
Length = 399
Score = 29.1 bits (62), Expect = 8.8
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = -1
Query: 905 GGGVGGGGXXXXXVXWIKXGXXGMGXGGXXNXAXGWGXXGYXXXWMGWRGEGDGXVG 735
G G GGGG W G G GG + G GY G G G G G
Sbjct: 59 GSGNGGGGGGS----WNDRGGNSYGNGGASKDSYNKGHGGYSGGGGGGGGGGGGGSG 111
>AE014298-2350|AAF48578.2| 399|Drosophila melanogaster CG3606-PA,
isoform A protein.
Length = 399
Score = 29.1 bits (62), Expect = 8.8
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = -1
Query: 905 GGGVGGGGXXXXXVXWIKXGXXGMGXGGXXNXAXGWGXXGYXXXWMGWRGEGDGXVG 735
G G GGGG W G G GG + G GY G G G G G
Sbjct: 59 GSGNGGGGGGS----WNDRGGNSYGNGGASKDSYNKGHGGYSGGGGGGGGGGGGGSG 111
>AE014298-1424|AAF46566.2| 349|Drosophila melanogaster CG2961-PA
protein.
Length = 349
Score = 29.1 bits (62), Expect = 8.8
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -1
Query: 905 GGGVGGGGXXXXXVXWIKXGXXGMGXGGXXNXAXGWGXXGYXXXWMGWRGEG 750
GGG GGGG I G G GG G G GY G G G
Sbjct: 25 GGGGGGGGGSKTTYNVIATPSSG-GGGGGGGGGGGGGGHGYSYAQGGGGGHG 75
>AE014297-4048|AAF56656.1| 286|Drosophila melanogaster CG5812-PA
protein.
Length = 286
Score = 29.1 bits (62), Expect = 8.8
Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
Frame = -1
Query: 905 GGGVGGG-GXXXXXVXWIKXGXXGMGXGGXXNXAXGWGXXGYXXXWMGWRGEGDGXVGIV 729
GGG GGG G + G G GG G+G G+ G G G G G +
Sbjct: 57 GGGFGGGFGGGSGGGGFSSGGGGGFSSGGGGGGGGGFG-GGFGGGSGGGSGGGFGGGGSI 115
Query: 728 SXRXXXGDXXXGT 690
G GT
Sbjct: 116 GGFGGGGGGGGGT 128
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,230,631
Number of Sequences: 53049
Number of extensions: 303660
Number of successful extensions: 3625
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2819
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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