Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_H21
(904 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL590551-1|CAH71650.1| 600|Homo sapiens fibronectin type III do... 32 3.3
U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein. 31 4.3
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 31 4.3
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 31 4.3
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 31 4.3
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 31 4.3
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 31 4.3
DQ009660-1|AAY26234.1| 1836|Homo sapiens expressed in synovial l... 31 5.7
BC146783-1|AAI46784.1| 1773|Homo sapiens FNDC1 protein protein. 31 5.7
AB058769-1|BAB47495.2| 1783|Homo sapiens KIAA1866 protein protein. 31 5.7
>AL590551-1|CAH71650.1| 600|Homo sapiens fibronectin type III
domain containing 1 protein.
Length = 600
Score = 31.9 bits (69), Expect = 3.3
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +1
Query: 145 TLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP 306
T TPL TP TAT TT + TT + T T +TT T T P
Sbjct: 161 TTTTPLPTTTTPRPTTATTRRTTTTRRTTTRRPTTTVRTTTRTTTTTTPTPTTP 214
>U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein.
Length = 358
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +3
Query: 141 ANAQDPVRVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 308
A A PV + A NGY P+ +P P PNG P + A VDP Q
Sbjct: 157 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 212
>BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +3
Query: 141 ANAQDPVRVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 308
A A PV + A NGY P+ +P P PNG P + A VDP Q
Sbjct: 264 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 319
>BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein.
Length = 407
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +3
Query: 141 ANAQDPVRVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 308
A A PV + A NGY P+ +P P PNG P + A VDP Q
Sbjct: 206 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 261
>AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +3
Query: 141 ANAQDPVRVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 308
A A PV + A NGY P+ +P P PNG P + A VDP Q
Sbjct: 264 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 319
>AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +3
Query: 141 ANAQDPVRVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 308
A A PV + A NGY P+ +P P PNG P + A VDP Q
Sbjct: 264 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 319
>AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat
containing 4 variant protein.
Length = 441
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +3
Query: 141 ANAQDPVRVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 308
A A PV + A NGY P+ +P P PNG P + A VDP Q
Sbjct: 240 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 295
>DQ009660-1|AAY26234.1| 1836|Homo sapiens expressed in synovial lining
protein protein.
Length = 1836
Score = 31.1 bits (67), Expect = 5.7
Identities = 22/56 (39%), Positives = 23/56 (41%)
Frame = +1
Query: 145 TLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKG 312
T TPL TP TAT TT R +TTT T T T I T P G
Sbjct: 1403 TTTTPLPTTTTPRPTTATTRRTTTRRPTTTVRTTTRTTTTTTPKPTTPIP-TCPPG 1457
>BC146783-1|AAI46784.1| 1773|Homo sapiens FNDC1 protein protein.
Length = 1773
Score = 31.1 bits (67), Expect = 5.7
Identities = 22/56 (39%), Positives = 23/56 (41%)
Frame = +1
Query: 145 TLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKG 312
T TPL TP TAT TT R +TTT T T T I T P G
Sbjct: 1340 TTTTPLPTTTTPRPTTATTRRTTTRRPTTTVRTTTRTTTTTTPKPTTPIP-TCPPG 1394
>AB058769-1|BAB47495.2| 1783|Homo sapiens KIAA1866 protein protein.
Length = 1783
Score = 31.1 bits (67), Expect = 5.7
Identities = 22/56 (39%), Positives = 23/56 (41%)
Frame = +1
Query: 145 TLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKG 312
T TPL TP TAT TT R +TTT T T T I T P G
Sbjct: 1350 TTTTPLPTTTTPRPTTATTRRTTTRRPTTTVRTTTRTTTTTTPKPTTPIP-TCPPG 1404
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,171,016
Number of Sequences: 237096
Number of extensions: 1967037
Number of successful extensions: 7200
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7165
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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