Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_H14
         (1372 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0225 - 1668176-1668190,1668557-1668570,1669139-1669277,166...    31   2.8  

>05_01_0225 - 1668176-1668190,1668557-1668570,1669139-1669277,
            1669398-1669520,1669710-1669940
          Length = 173

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 15/33 (45%), Positives = 15/33 (45%)
 Frame = +2

Query: 995  GGGGGGAXXAAXGVXXXGKEXXXXXPPXXXXAA 1093
            GGGGGGA   A GV   G       PP    AA
Sbjct: 16   GGGGGGAASEASGVAGGGSSPPHPPPPATTAAA 48


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.146    0.473 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,606,921
Number of Sequences: 37544
Number of extensions: 159706
Number of successful extensions: 1212
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4329950544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)