Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_H13
         (916 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0162 - 1302497-1302787,1304608-1305271,1305380-1306927,130...    30   2.2  
03_01_0515 - 3864796-3865425                                           29   5.2  
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012...    24   7.7  

>08_01_0162 -
           1302497-1302787,1304608-1305271,1305380-1306927,
           1307360-1308768
          Length = 1303

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -3

Query: 227 SIFLKSFHLGSGAALTAPRASTNAKTKLKIRTKFILPKFYSAGEFKIPNTISFD 66
           SI     HLG G  L+ PR   +     K+  K +LP+  S G F    T SF+
Sbjct: 219 SILAMRLHLGYG--LSGPRHRPDYNLSYKVDLKSVLPELVSVG-FSASTTTSFE 269


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = +2

Query: 551 PPXPFXXXSXXGXPXXPXXPPXXXXPHXPPXSP 649
           PP P    S    P  P  PP    P  PP SP
Sbjct: 74  PPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSP 106


>09_04_0081 -
           14400293-14400397,14400953-14401036,14401144-14401214,
           14401293-14401380,14401487-14401678,14401772-14402704
          Length = 490

 Score = 24.2 bits (50), Expect(2) = 7.7
 Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
 Frame = +1

Query: 574 LPXGXAQXXXXX--PKXXXPPPPPXVP 648
           LP G  Q       PK   PPPPP  P
Sbjct: 132 LPRGPGQEPPPPHVPKAAPPPPPPPPP 158



 Score = 22.6 bits (46), Expect(2) = 7.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 625 PPPPPXVPXG 654
           PPPPP  P G
Sbjct: 154 PPPPPHAPPG 163


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,077,578
Number of Sequences: 37544
Number of extensions: 232009
Number of successful extensions: 1243
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)