Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_H12
         (902 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863...    31   1.7  
09_06_0206 - 21580240-21580467,21580544-21580591,21581533-215823...    29   3.8  
09_02_0580 + 10884012-10884081,10884173-10884419,10884472-108847...    29   5.1  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   5.1  
03_02_0342 - 7645323-7645909,7646323-7646491                           29   6.7  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   6.7  
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969...    29   6.7  
07_03_1160 - 24430240-24431268                                         28   8.8  

>03_02_0455 -
           8630543-8630893,8630994-8631068,8631149-8631223,
           8631332-8631397,8631891-8631967,8632659-8633070
          Length = 351

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 14/43 (32%), Positives = 14/43 (32%)
 Frame = +1

Query: 520 PPXPXPXXXPXXXXPPXXXXXXXXXPXXXXXPPXGGXPXPPXP 648
           PP P     P    PP         P     PP GG   PP P
Sbjct: 267 PPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPP 309


>09_06_0206 -
           21580240-21580467,21580544-21580591,21581533-21582321,
           21582779-21582979
          Length = 421

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 197 FLKQRTNPWKNASEAGYVFDTALQRFLSMKV 289
           F+ QR   W N S     +DT L RF+++K+
Sbjct: 44  FVAQRKLGWGNFSTVWLAYDTLLNRFVALKI 74


>09_02_0580 +
           10884012-10884081,10884173-10884419,10884472-10884735,
           10885630-10886093,10888326-10888396
          Length = 371

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = +2

Query: 188 RREFLKQRTNPWKNASEAGYVFDTALQRFLSMKVTQFEYFTVNKRTSL 331
           RR    Q    WKN S A  + DT+L   + + V Q     V+  TSL
Sbjct: 202 RRWLRMQLDRTWKNLSTASTIKDTSLDYAVPLPVMQTAAEAVSNETSL 249


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = +2

Query: 134 SDAELNLIKTQASRRAEMRREFLKQRTNPWKNASEAGYVFDTALQRFLSMKVTQ 295
           S + L   +T+  RRA  +RE+ KQR    KN         T LQ+   ++  Q
Sbjct: 148 SKSALPRAETEEERRARKKREYEKQRAEDRKNQQMMRQSQATVLQKTQQVRAAQ 201


>03_02_0342 - 7645323-7645909,7646323-7646491
          Length = 251

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 15/51 (29%), Positives = 15/51 (29%)
 Frame = +1

Query: 490 KYIVNXMXXXPPXPXPXXXPXXXXPPXXXXXXXXXPXXXXXPPXGGXPXPP 642
           KY    M   PP P P        PP         P     PP    P PP
Sbjct: 164 KYKKKFMFAPPPPPPPRPPAPEYKPPTPTLTPIPTPEPSYGPPAPKPPAPP 214


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/43 (30%), Positives = 13/43 (30%)
 Frame = +1

Query: 520 PPXPXPXXXPXXXXPPXXXXXXXXXPXXXXXPPXGGXPXPPXP 648
           PP P P        PP         P     PP    P PP P
Sbjct: 316 PPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPP 358


>01_06_1678 -
           39095986-39096205,39096400-39096477,39096578-39096949,
           39097374-39097671,39097867-39098077,39098331-39099023
          Length = 623

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +2

Query: 509 CXXXPPPPXPXXXPXXXPPXP 571
           C   PPPP P   P   PP P
Sbjct: 115 CPPRPPPPPPPHPPEDPPPHP 135


>07_03_1160 - 24430240-24431268
          Length = 342

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/43 (30%), Positives = 13/43 (30%)
 Frame = +1

Query: 520 PPXPXPXXXPXXXXPPXXXXXXXXXPXXXXXPPXGGXPXPPXP 648
           PP P P   P    PP         P     P   G P P  P
Sbjct: 243 PPQPNPDMPPKPDQPPQPCPDGPPKPDQPPQPNPNGPPKPDQP 285


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,260,436
Number of Sequences: 37544
Number of extensions: 386782
Number of successful extensions: 1463
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)