Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_H09
         (945 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            32   0.022
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   4.4  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   7.7  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   7.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 32.3 bits (70), Expect = 0.022
 Identities = 18/37 (48%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +2

Query: 488 FPLXPXAXPRXPXXFRGYPRA--PPXXPXRPPXGPXP 592
           FPL P A  R P  F   P A  PP  P  PP GP P
Sbjct: 560 FPLNP-AQLRFPAGFPNLPNAQPPPAPPPPPPMGPPP 595



 Score = 25.8 bits (54), Expect = 1.9
 Identities = 18/70 (25%), Positives = 19/70 (27%)
 Frame = +3

Query: 531 SGATPGPHPXXPXGPPXXPAPAXXXPPXXXXFPRGXXXXXXXXXXXXXXXXILXXXGXPP 710
           +G   GP P  P G      P    PP      R                        PP
Sbjct: 524 TGGPLGPPPPPPPGGAVLNIPPQFLPPPLNLL-RAPFFPLNPAQLRFPAGFPNLPNAQPP 582

Query: 711 PXGPPPXPXG 740
           P  PPP P G
Sbjct: 583 PAPPPPPPMG 592



 Score = 25.4 bits (53), Expect(2) = 0.079
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 705 PPPXGPPPXP 734
           PPP GPPP P
Sbjct: 588 PPPMGPPPSP 597



 Score = 23.4 bits (48), Expect(2) = 0.079
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +3

Query: 492 PSXXGXSPGXPXXSGATPGPHPXXPXGPPXXPAPA 596
           P+      G P    A P P P  P  PP  P P+
Sbjct: 564 PAQLRFPAGFPNLPNAQPPPAPPPP--PPMGPPPS 596


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 18/64 (28%), Positives = 18/64 (28%)
 Frame = -3

Query: 733 GXGGGPXGGGXPXXXRMGGXXXXXXXXXXXXXXXXGKXXXXGGXXXAGAGXXGGPXGXXG 554
           G GGG  GGG                         G     GG    G G  GGP    G
Sbjct: 168 GGGGGGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGG 227

Query: 553 WGPG 542
            G G
Sbjct: 228 GGGG 231


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 17/56 (30%), Positives = 18/56 (32%)
 Frame = +1

Query: 199 GXFGPXPGLXXXXKXGXXGXXGXLWXXWXPFXPGFXXVPXXXGLPXXXPGPGGXXG 366
           G  G   G     + G  G  G       P  PG   VP   G P   PG  G  G
Sbjct: 571 GLKGELGGRCTDCRPGMKGDKGERGYAGEPGRPGASGVPGERGYP-GMPGEDGTPG 625


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -2

Query: 380 KXQKPPXXPPGPGXXXGRPXXXGTXXNPG*KG 285
           K +  P  P G     GRP   G    PG KG
Sbjct: 160 KGEPGPKGPAGHPGAPGRPGVDGVKGLPGLKG 191


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 388,099
Number of Sequences: 2352
Number of extensions: 5216
Number of successful extensions: 48
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103362750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)