Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_H08
(866 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0836 - 6795224-6795263,6796027-6796128,6796264-6796401,679... 136 2e-32
07_01_0482 + 3627980-3628270,3628785-3629012,3629116-3629237,362... 97 2e-20
07_03_0517 + 19000050-19000427,19000539-19000766,19001142-190012... 93 3e-19
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 31 1.2
01_06_1796 - 39932487-39932633,39933150-39933201,39933370-399334... 31 1.6
09_04_0388 + 17234485-17234583,17234710-17234893,17235252-172360... 30 2.8
07_03_1700 - 28810239-28810870,28811304-28812594 30 2.8
10_08_0523 - 18518158-18518442,18518786-18518899,18518994-185192... 29 4.8
01_03_0229 + 13995610-13995844,13996391-13996445,13998126-139982... 29 6.4
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 8.4
06_03_0757 + 24267599-24268882 28 8.4
03_05_1016 + 29726949-29727503,29728863-29729504 28 8.4
03_02_0320 + 7437528-7437623,7437725-7437772,7438885-7438994,743... 28 8.4
>07_01_0836 -
6795224-6795263,6796027-6796128,6796264-6796401,
6796790-6796932,6797388-6797607,6798087-6798208,
6798317-6798544,6798993-6799355
Length = 451
Score = 136 bits (330), Expect = 2e-32
Identities = 71/201 (35%), Positives = 123/201 (61%), Gaps = 1/201 (0%)
Frame = +1
Query: 130 SKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRML 309
++ DLT ++ +D HLVFPLLEFL + Y E+L+AKL +LS TNM+DY DI + L
Sbjct: 2 AEHDLTARMAGQMDCHLVFPLLEFLQERALYANKEILEAKLRLLSGTNMVDYAMDIHKSL 61
Query: 310 YPEEDTPEEIIQRRGVVLSELQELQDAVEPVLRLMQRDDVMKTIETMRDPKTLINHLSTN 489
+ ++ P+++++RR V+S L+ L +A P++ +Q + ++ +R K H+ +
Sbjct: 62 HDTDEVPDDMVRRRTDVVSRLRALDEATAPIVSFLQNQQL---VQELRPDKQYNLHMLQD 118
Query: 490 KEYEFKIEMIDSMYRLXKYRYECGNYVESASYLYFCQLVMSPT*XELFVGSL-G*IG*RN 666
+ ++ E I+++Y+ K++++CGNY ++A YLY Q T E + +L G +
Sbjct: 119 R-FQIGPEQIETLYQFAKFQFDCGNYSDAAVYLY--QYRALCTNSERSLSALWGKLAAEI 175
Query: 667 LVXNWDGALDDLTQXREFIDN 729
L+ NWD ALD+L + +E ID+
Sbjct: 176 LMQNWDVALDELNRLKEIIDS 196
>07_01_0482 +
3627980-3628270,3628785-3629012,3629116-3629237,
3629747-3629966,3630434-3630576,3631004-3631141,
3631275-3631380
Length = 415
Score = 96.7 bits (230), Expect = 2e-20
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 1/201 (0%)
Frame = +1
Query: 130 SKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRML 309
++ DLT ++ +LD HLV PLLEFL + Y + E+L+AK+ +L TNM+DY DI +
Sbjct: 2 AEHDLTARMAGHLDCHLVLPLLEFLQERHLYPEEEILEAKIRLLRGTNMVDYAMDIHKSR 61
Query: 310 YPEEDTPEEIIQRRGVVLSELQELQDAVEPVLRLMQRDDVMKTIETMRDPKTLINHLSTN 489
Y +D PE++++RR E V RL + + I +
Sbjct: 62 YGTDDVPEDMVKRRA-------------EVVSRLTSLGEAIDNI---------------H 93
Query: 490 KEYEFKIEMIDSMYRLXKYRYECGNYVESASYLYFCQLVMSPT*XELFVGSL-G*IG*RN 666
+ + + I+++Y+ K++++CGNY +A YL+ Q T E + +L G +
Sbjct: 94 QNQQIGPDQIETLYQYAKFQFDCGNYSFAAQYLH--QYRALCTNIERSLSALWGKLAAEI 151
Query: 667 LVXNWDGALDDLTQXREFIDN 729
L+ NWD AL++L + +E ID+
Sbjct: 152 LMQNWDVALEELNRLKEIIDS 172
>07_03_0517 +
19000050-19000427,19000539-19000766,19001142-19001221,
19001222-19001441,19001571-19001713,19002023-19002160,
19002295-19002376
Length = 422
Score = 92.7 bits (220), Expect = 3e-19
Identities = 59/209 (28%), Positives = 112/209 (53%), Gaps = 9/209 (4%)
Frame = +1
Query: 130 SKFDLTFKIGQYLDRHLVFPLLEFLAAK--ETYDQSELLQAKLEILSK-TNMIDYVTDIR 300
++ DLT ++ +++ HLVFPLLEFL + Y E+LQAKL +L + TNM+DY D
Sbjct: 2 AEHDLTARMAAHMNCHLVFPLLEFLQWRPGRVYAVEEILQAKLRLLIQGTNMVDYAMDTH 61
Query: 301 RMLYPEED------TPEEIIQRRGVVLSELQELQDAVEPVLRLMQRDDVMKTIETMRDPK 462
++L+ + D P+++++RR V++ L L P++ ++ + P
Sbjct: 62 KLLHGDTDDDVVVPVPDDMVERRHEVVTRLGALAAPAAPIVSALKNHHL--------GPD 113
Query: 463 TLINHLSTNKEYEFKIEMIDSMYRLXKYRYECGNYVESASYLYFCQLVMSPT*XELFVGS 642
N ++ ++ + I+++Y+ K++++CGNY ++A L+ + + + + L
Sbjct: 114 KEHNIRMLHERFQIGPDQIEALYQYAKFQFDCGNYPDAAENLHRYRALCTSSERSL-SAQ 172
Query: 643 LG*IG*RNLVXNWDGALDDLTQXREFIDN 729
G + L NWD AL++L +E ID+
Sbjct: 173 WGKLSAEILNNNWDVALEELNCLKEMIDS 201
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +1
Query: 220 YDQSELLQAKLEILSKTNMIDYVTDIRRMLYPEEDTPEEIIQRRGVVLSELQELQDAVEP 399
YD + + +T D D L P+EDT E ++RRGV L+E + +AV+
Sbjct: 363 YDPPQDPNVFIHRAGRTARYDQEGDAIVFLLPKEDTYVEFLKRRGVPLTERECSTNAVDI 422
Query: 400 V 402
V
Sbjct: 423 V 423
>01_06_1796 -
39932487-39932633,39933150-39933201,39933370-39933495,
39933645-39933743,39934039-39934258,39934599-39934764,
39935108-39935161,39935527-39935657,39935747-39935818,
39936524-39936602,39936705-39936783,39936868-39936902,
39936986-39937111
Length = 461
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 664 NLVXNWDGALDDLTQXREFIDNGGAGSHWPAXCQAPTATGPGLGP 798
+L NW+ ALD T + + + + W + PTA PG+ P
Sbjct: 234 SLPENWEEALDQSTGQKYYYNTNTQATQW----EPPTAVNPGVAP 274
>09_04_0388 +
17234485-17234583,17234710-17234893,17235252-17236057,
17236148-17236432
Length = 457
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 555 MWKLCGVSIISLLLSTGDVAHL-TRIICRFFGVNW 656
M LCG +++LL T DVAH T+I+ F G NW
Sbjct: 5 MAALCGFLLVALLWLTPDVAHAQTQIL--FQGFNW 37
>07_03_1700 - 28810239-28810870,28811304-28812594
Length = 640
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = +1
Query: 217 TYDQSELLQAKLEILSKTNMIDYVTDIRRMLYPEEDTPEEIIQRRGVVLSELQELQDAVE 396
T+D +LL+A E+L K + Y T + +L ED +++R V++ +E + +E
Sbjct: 336 TFDLEDLLRASAEVLGKGS---YGTAYKAIL---EDGTVVVVKRLKDVVAGKKEFEQQME 389
Query: 397 PVLRLMQRDDV--MKTIETMRDPKTLINHLSTNKEYEFKIEMI 519
+ RL + ++ ++ +D K ++ TN + K+ I
Sbjct: 390 LIGRLGKHANLVPLRAYYYSKDEKLIVYDYLTNGSFSTKLHGI 432
>10_08_0523 -
18518158-18518442,18518786-18518899,18518994-18519219,
18519364-18519470,18519809-18519964,18520100-18520210
Length = 332
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +1
Query: 250 LEILSKTNMIDY---VTDIRRMLYPEEDTPEEIIQRRGVVLSELQELQDAVEPVL 405
+EIL ++ +++ V I ++LY ED P + + + ++ + Q Q + P+L
Sbjct: 225 VEILCQSPEVEHLPIVNAIHKVLYAAEDDPSMVAEAQAMISQQQQSEQPMLSPIL 279
>01_03_0229 +
13995610-13995844,13996391-13996445,13998126-13998211,
13999484-13999671,14000111-14000169,14000618-14000646,
14000742-14001138,14001569-14002028
Length = 502
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -1
Query: 821 KEHGIATXGPSPGPVAVGAWHXAGQWEPAPP 729
+ HG+ +PG G W AG+ P PP
Sbjct: 455 QSHGVTDHSAAPGRRLFGQWIGAGRSPPPPP 485
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +2
Query: 53 GCWFLPTTCVSIFIRIHENKLST*VTQNLI----*RLK*DSILIGISCFLY*NS*QQRRH 220
GC LP + + F+R+ E+ LST QN+I R S+ +SC L Q H
Sbjct: 108 GCPVLPLSLIQHFLRVCEHWLSTGNNQNIILLHCERGGWPSLAFMLSCLLIFKKLQSAEH 167
Query: 221 MT 226
T
Sbjct: 168 KT 169
>06_03_0757 + 24267599-24268882
Length = 427
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 812 GIATXGPSPGPVAVGAWHXAGQWEPAPPLSMNSRXWVRSSSA 687
G + G S G VA +W AG W P + W R SSA
Sbjct: 333 GFSAGGSSTGWVANPSWRPAGPWVCFNPWPAQQQAW-RPSSA 373
>03_05_1016 + 29726949-29727503,29728863-29729504
Length = 398
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -1
Query: 824 LKEHGIATXGPSPGPVAVGAWHXAGQWEPAPPLSMNSRXWVR 699
+ H +A P+ +GAW AG P PP W R
Sbjct: 54 MARHTLAAAAPALFRPCLGAWGAAGAPPPPPPPPEGLERWTR 95
>03_02_0320 +
7437528-7437623,7437725-7437772,7438885-7438994,
7439651-7439735,7439839-7440115,7440296-7440454,
7440563-7440666,7440930-7441168,7441265-7441583,
7441665-7442069,7442157-7442294,7442376-7442555
Length = 719
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = -2
Query: 454 PSWFQL----FSLHHLFA*VSILALLHLEVPAVPKELHLSAV*FLQECLLQD 311
PS F+L FSL L A VS ++L H E +P+++H + L+ C+ +D
Sbjct: 367 PSVFRLRYGWFSLAELEAGVSEISLTHFENCLIPEDIHAKSP--LEACVQKD 416
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,365,963
Number of Sequences: 37544
Number of extensions: 455863
Number of successful extensions: 1130
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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