Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_H08
(866 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic in... 116 2e-26
Z30662-2|CAA83135.1| 181|Caenorhabditis elegans Hypothetical pr... 33 0.35
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 31 1.1
Z29121-2|CAA82388.2| 294|Caenorhabditis elegans Hypothetical pr... 29 3.3
U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1... 29 4.3
U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1... 29 4.3
U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1... 29 4.3
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF047881-1|AAC27552.1| 942|Caenorhabditis elegans truncated CLR... 29 4.3
AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein. 29 4.3
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 28 7.5
Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical pr... 28 9.9
CU457741-7|CAM36348.1| 710|Caenorhabditis elegans Hypothetical ... 28 9.9
>AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic
initiation factor protein3.E protein.
Length = 432
Score = 116 bits (280), Expect = 2e-26
Identities = 62/215 (28%), Positives = 115/215 (53%), Gaps = 3/215 (1%)
Frame = +1
Query: 130 SKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRML 309
S FDLT ++ +LD HL+ PLLEF+ + YD+ L + ++L+KTNMID V +
Sbjct: 2 STFDLTQRMAPFLDLHLIIPLLEFIEPRGIYDEKSLTEMHRQLLTKTNMIDSVIE----T 57
Query: 310 YPEEDTPEEIIQRRGVVLSELQELQDAVEPVLRLMQRDDVMKTIETMRDPK---TLINHL 480
Y + P I ++ ++ E EL+ V+ V+ +++ +V + ++ R+ ++ HL
Sbjct: 58 YNGKPIPAAIEAKKKQIIKERDELKSKVDSVVAILEIPEVKEMMDNNRERDGNVRILEHL 117
Query: 481 STNKEYEFKIEMIDSMYRLXKYRYECGNYVESASYLYFCQLVMSPT*XELFVGSLG*IG* 660
+ N + F ++M+D++++ K+ YECGNY ++ LY+ + +++ G +
Sbjct: 118 TQN--HNFTVDMVDTLFKYSKFMYECGNYTVASVCLYYYRNLVNQADPNYLNALYGKLAS 175
Query: 661 RNLVXNWDGALDDLTQXREFIDNGGAGSHWPAXCQ 765
L+ W+ A DDL + R +ID + W Q
Sbjct: 176 EILLQEWEHARDDLLKLRAYIDANPFDTEWELVTQ 210
>Z30662-2|CAA83135.1| 181|Caenorhabditis elegans Hypothetical
protein T16H12.2 protein.
Length = 181
Score = 32.7 bits (71), Expect = 0.35
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +1
Query: 247 KLEILSKTNMIDYVTDIRRMLYPEEDTPEEIIQRRGVVLSELQELQDAVEP 399
K I+ +T +V + +LYP++DTP +I++ R L Q+ +D EP
Sbjct: 110 KHHIVCRTCQQSHVKAVCPILYPKKDTPPKILRARRRSLIRAQKKKDFQEP 160
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/77 (23%), Positives = 38/77 (49%)
Frame = -3
Query: 522 IDHFNFKLILLVCRKMVYKSFRIPHGFNCFHYIISLHESQYWLYCILKFLQFRKNYTSPL 343
++H + K I C + V ++ H F +++++ + S+Y + I+ LQ+ TS
Sbjct: 2727 VEHHDLKRIKSACVQSVRRAVAFSHAFRVWNWLLRMVSSEYSVSDII--LQYLTTLTS-- 2782
Query: 342 YNFFRSVFFRIEHSSDV 292
YN F + +S++
Sbjct: 2783 YNRLAEYMFSAKKNSNI 2799
>Z29121-2|CAA82388.2| 294|Caenorhabditis elegans Hypothetical
protein ZK757.2 protein.
Length = 294
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 677 IGMARSMI*PNXESSSITVEPVPTGQXHAKPLQXPDLGWVPGSLFRVPSNHGQKDR 844
IG + +++ P+ SSS P+P + H +P + + +P S R S G+K +
Sbjct: 230 IGASPTLLVPSSSSSSSVRGPIPLQRAHTEPPKEASI--LPKSALRDKSKSGEKKK 283
>U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1,
isoform c protein.
Length = 942
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 658 SQFTPKNRQIILVRWATSPVDKSKDMMLTPHNFHIHSD 545
+ T KNRQ W + + D+++ P +F HSD
Sbjct: 890 ANLTEKNRQQCAKYWPDEQITRYGDIIVEPASFSFHSD 927
>U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1,
isoform a protein.
Length = 1409
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 658 SQFTPKNRQIILVRWATSPVDKSKDMMLTPHNFHIHSD 545
+ T KNRQ W + + D+++ P +F HSD
Sbjct: 890 ANLTEKNRQQCAKYWPDEQITRYGDIIVEPASFSFHSD 927
>U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1,
isoform b protein.
Length = 1444
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 658 SQFTPKNRQIILVRWATSPVDKSKDMMLTPHNFHIHSD 545
+ T KNRQ W + + D+++ P +F HSD
Sbjct: 925 ANLTEKNRQQCAKYWPDEQITRYGDIIVEPASFSFHSD 962
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 166 LDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRMLYPEEDTP 330
L R ++ L EF +TY E L+AKLE + + + ++ PE+D+P
Sbjct: 408 LRRPVILRLREFDKDDKTYYDEETLKAKLEEHAVKKLEEEKDKLQSAAAPEDDSP 462
>AF047881-1|AAC27552.1| 942|Caenorhabditis elegans truncated CLR-1
protein.
Length = 942
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 658 SQFTPKNRQIILVRWATSPVDKSKDMMLTPHNFHIHSD 545
+ T KNRQ W + + D+++ P +F HSD
Sbjct: 890 ANLTEKNRQQCAKYWPDEQITRYGDIIVEPASFSFHSD 927
>AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein.
Length = 1409
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 658 SQFTPKNRQIILVRWATSPVDKSKDMMLTPHNFHIHSD 545
+ T KNRQ W + + D+++ P +F HSD
Sbjct: 890 ANLTEKNRQQCAKYWPDEQITRYGDIIVEPASFSFHSD 927
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 217 TYDQSELLQAKLEILSKTN-MIDYVTDIRRMLYPEEDTPEEIIQRR 351
T+ Q E L+ T +ID+ I M+Y + TPEE+IQR+
Sbjct: 271 TFPQDYRTSEHAEFLNWTRVLIDFGASIG-MVYDRKTTPEEVIQRQ 315
>Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical
protein K08E3.4 protein.
Length = 643
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = -1
Query: 794 PSPGPVAVGAWHXAGQWEPAPPLSMNSRXWVRSSSAPSQFXTKFR*PIYPKEPTNNSXQV 615
P P P + H A Q++ APP+ + V SAPS + +++ P P + ++S Q+
Sbjct: 485 PPPEPTPAPS-HYASQYD-APPVHESFEPAVPPVSAPSHYASQYDAPPEPIDSHSSSSQL 542
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 217 TYDQSELLQAKLEILSKTN-MIDYVTDIRRMLYPEEDTPEEIIQRR 351
T+ Q E L+ T +ID+ I M+Y + TPEE+IQR+
Sbjct: 271 TFPQDYRTSEHAEFLNWTRVLIDFGASIG-MVYDRKTTPEEVIQRQ 315
>Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical protein
F36G3.1 protein.
Length = 964
Score = 27.9 bits (59), Expect = 9.9
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +1
Query: 232 ELLQAK-LEILSKTNMIDYVTDIRRMLYPEEDTPEEIIQRRGVVLSELQELQDAVEPVL- 405
E++Q K E+ + V +I L + D+ + I+QR+ ++ L+E DA+ L
Sbjct: 723 EIVQRKDQELAILKEKVTNVINIENSLKDDVDSQKVIVQRQKEIIENLREELDAITKKLG 782
Query: 406 RLMQRDDVMKTIETMRDPKTLINHLSTNKEYEFKIEMIDSMYRLXKYR 549
+ + D T+ K + ++E + +E+ D L K +
Sbjct: 783 EVTKLRDKAVEEATLYKMKNMERDRFLSREAQMSMEIEDLQRELNKQK 830
>CU457741-7|CAM36348.1| 710|Caenorhabditis elegans Hypothetical
protein C42C1.7 protein.
Length = 710
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -3
Query: 405 QYWLYCILKFLQFRKNYTSPLYNFFRSVFFRIEHSSDVSNIIYHVSFAQN 256
++ YC+L + +TSP F SVF RI + I+Y + F ++
Sbjct: 170 KFGYYCLLGVISISYYFTSPQTTAFNSVFARIWQFL-IGMIVYLIYFKKS 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,208,640
Number of Sequences: 27780
Number of extensions: 399129
Number of successful extensions: 1027
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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