Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_H07
         (1153 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0904 + 20717005-20718087                                         31   1.7  
04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888     29   6.9  

>04_03_0904 + 20717005-20718087
          Length = 360

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 23/79 (29%), Positives = 25/79 (31%)
 Frame = +1

Query: 793  PSTXXAXTXXTQXPXXXXXXKXXXTPPXPXKTXXPXXXXXXKKNTPPNXXSXKXPTXXKX 972
            P T       T  P      K   TP  P  T  P       K TP        P   K 
Sbjct: 143  PPTYKPQPKPTPPPTYKPQPKPTPTPYTPTPT--PPSYKPQPKPTPTPYTPTPTPPSYKP 200

Query: 973  KPXPXXXHDTPTXTPXAXK 1029
            +P P     TPT TP + K
Sbjct: 201  QPKPTPTPYTPTPTPPSYK 219



 Score = 28.7 bits (61), Expect = 9.2
 Identities = 53/259 (20%), Positives = 59/259 (22%), Gaps = 3/259 (1%)
 Frame = +1

Query: 262  TPXXXXXXEXXXAXXXKPGAXGXXPPXKKXTKPEXXTXNQKKTTXPXXPXXXXAPRXXXP 441
            TP          A    P      P   K T P       K T  P  P          P
Sbjct: 92   TPPPYTPKPTPPAHTPTPPTYTPTPTPPKPTPPTYKP-QPKPTPAPYTPTPTPPTYKPQP 150

Query: 442  RXXTGTPXKSXQEKXXKTXXXPXKXXTRXXXXXRPX-SRXXKXXHPAXXXKXXXETGXPX 618
            +  T  P    Q K   T   P           +P  +       P         T  P 
Sbjct: 151  KP-TPPPTYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPY 209

Query: 619  TXRPDXXRXGGXXXPXXAXRXA-HPXXXPKPXNAQTXPXXATNXKHXPTKXXXKRKXQXP 795
            T  P          P         P   P P      P      K  P      +    P
Sbjct: 210  TPTPTPPSYKPQPKPNPPPTYKPQPKPNPPPTYKPAPPTYKPQPKPNPPPTYKPQPKPTP 269

Query: 796  STXXAXTXXTQXPXXXXXXKXXXTP-PXPXKTXXPXXXXXXKKNTPPNXXSXKXPTXXKX 972
            +     T   Q            TP P P  T  P         TP        P+    
Sbjct: 270  TPYTPPTYKPQPKPTPTPTPYTPTPKPNPPPTYKPQPKPTPTP-TPYKPQPKPTPSPYTP 328

Query: 973  KPXPXXXHDTPTXTPXAXK 1029
            KP P     TPT TP   K
Sbjct: 329  KPTPTPPTYTPTPTPPYHK 347


>04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888
          Length = 213

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 15/54 (27%), Positives = 17/54 (31%)
 Frame = -2

Query: 258 CXXARLPPXXXSSXXVXGRVCXXXXXPPCSXXPPXSXPXPXSLCSFPPAXCXXY 97
           C    +PP         G  C     PP    PP   P   S   +PP  C  Y
Sbjct: 147 CNKPAVPPCAGGCSISDGGACGASCKPP-PPPPPAIWPPQPSFYYYPPPPCGGY 199


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.305    0.125    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,360,119
Number of Sequences: 37544
Number of extensions: 152984
Number of successful extensions: 355
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 337
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3503158800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)