Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_H06
(954 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81489-7|CAB04009.1| 225|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical pr... 29 4.9
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 6.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 6.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 6.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 6.5
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +2
Query: 524 PRSXXPPPXPTXSVXPXHRXSQXPPAXHXSXPXXXGXXXPPXP 652
PR+ PPP PT S P PPA P G PP P
Sbjct: 267 PRTGSPPPPPTGSPPP-------PPAGGSPPPPRAGSPPPPPP 302
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 530 SXXPPPXPTXSVXPXHRXSQXPPAXHXSXPXXXGXXXPPXP 652
S PPP P P R PP S P PP P
Sbjct: 252 SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +2
Query: 524 PRSXXPPPXPTXSVXPXHRXSQXPPAXHXSXPXXXGXXXPPXP 652
P + PPP T S P S PP S P PP P
Sbjct: 259 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +2
Query: 524 PRSXXPPPXPTXSVXPXHRXSQXPPAXHXSXPXXXGXXXPPXP 652
PR+ PPP PT S P PPA P G PP P
Sbjct: 288 PRTGSPPPPPTGSPPP-------PPAGGSPPPPRAGSPPPPPP 323
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 530 SXXPPPXPTXSVXPXHRXSQXPPAXHXSXPXXXGXXXPPXP 652
S PPP P P R PP S P PP P
Sbjct: 273 SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +2
Query: 524 PRSXXPPPXPTXSVXPXHRXSQXPPAXHXSXPXXXGXXXPPXP 652
P + PPP T S P S PP S P PP P
Sbjct: 280 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +2
Query: 524 PRSXXPPPXPTXSVXPXHRXSQXPPAXHXSXPXXXGXXXPPXP 652
PR+ PPP PT S P PPA P G PP P
Sbjct: 273 PRTGSPPPPPTGSPPP-------PPAGGSPPPPRAGSPPPPPP 308
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 530 SXXPPPXPTXSVXPXHRXSQXPPAXHXSXPXXXGXXXPPXP 652
S PPP P P R PP S P PP P
Sbjct: 258 SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +2
Query: 524 PRSXXPPPXPTXSVXPXHRXSQXPPAXHXSXPXXXGXXXPPXP 652
P + PPP T S P S PP S P PP P
Sbjct: 265 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/67 (31%), Positives = 23/67 (34%), Gaps = 7/67 (10%)
Frame = +1
Query: 568 PXPQXF----PXPTGXPXFPPLXXXXXXPXXPLXN---XXPPXLLAPXPPXKHSRXXTPX 726
P P F P P G P PP+ P P+ PP AP PP S
Sbjct: 68 PVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAP 127
Query: 727 XPLSPXT 747
P P T
Sbjct: 128 QPPRPKT 134
>Z81489-7|CAB04009.1| 225|Caenorhabditis elegans Hypothetical
protein C55A1.9 protein.
Length = 225
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +1
Query: 640 PXXPLXNXXPPXLLAPXPPXKHSRXXTPXXPLSP 741
P PL N PP P PP + + P +SP
Sbjct: 46 PLNPLPNYIPPRASPPSPPKMNGKYSLPPLTMSP 79
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = +2
Query: 539 PPPXPTXSVXPXHRXSQXPPAXHXSXPXXXGXXXPPXP 652
PPP P + P + PP P G PP P
Sbjct: 504 PPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPP 541
>Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical
protein E01B7.1 protein.
Length = 410
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/68 (27%), Positives = 23/68 (33%), Gaps = 2/68 (2%)
Frame = +1
Query: 568 PXPQXFPXPTGXPXFPPLXXXXXXPXXPLXNXX--PPXLLAPXPPXKHSRXXTPXXPLSP 741
P Q P P P P L P + PP L + PP P P+ P
Sbjct: 333 PTAQTPPAPAAPPAAPALNRQSTIPPVAMTQRPMIPPSLPSSTPPAPLKPVAPPTPPIFP 392
Query: 742 XTLRTAXP 765
RT+ P
Sbjct: 393 LLDRTSKP 400
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/85 (25%), Positives = 26/85 (30%), Gaps = 1/85 (1%)
Frame = +1
Query: 514 IXVPXQXXAXTXPHALRXPXPQXFPXPTGXPXFPPLXXXXXXPXXPLXNXXPPXLL-APX 690
+ VP A HA+ P P P P P P P + PP P
Sbjct: 92 VPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPP 151
Query: 691 PPXKHSRXXTPXXPLSPXTLRTAXP 765
PP HS P +A P
Sbjct: 152 PPAPHSAYIDHSAPRPAYIEHSAPP 176
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +2
Query: 518 LXPRSXXPPPXPTXSVXPXHRXSQXPPAXHXSXPXXXGXXXPPXP 652
L P + PPP P P PP P G PP P
Sbjct: 719 LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +2
Query: 518 LXPRSXXPPPXPTXSVXPXHRXSQXPPAXHXSXPXXXGXXXPPXP 652
L P + PPP P P PP P G PP P
Sbjct: 719 LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +2
Query: 518 LXPRSXXPPPXPTXSVXPXHRXSQXPPAXHXSXPXXXGXXXPPXP 652
L P + PPP P P PP P G PP P
Sbjct: 302 LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,857,916
Number of Sequences: 27780
Number of extensions: 147384
Number of successful extensions: 388
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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