Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_H05
(873 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce... 26 6.1
SPCC132.03 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 26 6.1
SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 26 6.1
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 26 6.1
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 26 6.1
SPAC13G7.11 |||mitochondrial inner membrane protein|Schizosaccha... 26 8.1
SPAC1783.02c |vps66||acyltransferase |Schizosaccharomyces pombe|... 26 8.1
SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyce... 26 8.1
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 26 8.1
>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2310
Score = 26.2 bits (55), Expect = 6.1
Identities = 22/87 (25%), Positives = 35/87 (40%)
Frame = -3
Query: 334 WLSVFVREPRVLRKLSQTHCSPSHAPLGNPSSRQSWSQAVKSQLRNLIEVLFVFKPSLKM 155
W V +R V KLSQ H SH N RQS A +++ +F+ +
Sbjct: 1979 WFHVQLRN--VTSKLSQKHFEESHERFAN--IRQSLKNAKILVVKSFTTSRSIFRSLFSL 2034
Query: 154 LMFITDACIVHKTLTKHSIDSIVTSYP 74
+ D ++ + + IDS+ P
Sbjct: 2035 A--VVDTTTIYSDIEQQLIDSLDKRQP 2059
>SPCC132.03 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 616 EDRSPSRSAILLLAIMSHLHRPLTHTPPG 530
+D S + +ILL+ + L +P+T TP G
Sbjct: 67 DDWSEQQESILLMCYENELQKPITCTPMG 95
>SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 780
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 291 NFLKTRGSRTKTDNQLPQLDCTTSECDQLCR 383
N LK +G + DNQ+P L +C+
Sbjct: 442 NLLKNKGKKKSQDNQIPHLVGFLGHLSTICK 472
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = -1
Query: 870 YWWWX*CXIASSVDAHTXQEIQXCDTTDRILGYY 769
YWW + AHT + DT D I YY
Sbjct: 107 YWWQSSDTMGGICIAHTDDNQRVMDTDDTIPSYY 140
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +1
Query: 277 NAFAIISSKHVVHAQKLTTNYLNWIVLRQSVINCVADSDFLAVSVLVDNANVEIYT 444
+ F +S HV H T + W+ L I CV + + + A V +YT
Sbjct: 205 STFFCLSRYHVYHKAPFTFYWFKWLFLTGVCIGCVCSVKLVGLFI---TAVVGLYT 257
>SPAC13G7.11 |||mitochondrial inner membrane
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 269
Score = 25.8 bits (54), Expect = 8.1
Identities = 8/17 (47%), Positives = 13/17 (76%), Gaps = 2/17 (11%)
Frame = +2
Query: 383 QIRIFWRYLY--WWTMR 427
+IR +WRYL+ WW ++
Sbjct: 73 KIRFWWRYLFYGWWNLK 89
>SPAC1783.02c |vps66||acyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 328
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 528 FPGGVCVNGRCKC 566
FP GVC NGR C
Sbjct: 214 FPEGVCTNGRALC 226
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 669 FPGGVCVNGRCKC 707
FP GVC NGR C
Sbjct: 214 FPEGVCTNGRALC 226
>SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 817
Score = 25.8 bits (54), Expect = 8.1
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -3
Query: 277 CSPSHAPLGNPSSRQSWSQAVKSQLRNLIEVLFVFKPSLKMLMF---ITDACIVHKTLTK 107
CSP + L +++ S A + Q + + F F P+L+ L +T+A V + TK
Sbjct: 334 CSPENPSLLVNTAKTSKMSARREQFQTNQNLPFCFTPNLEKLTIPYSVTEAANVFQNKTK 393
Query: 106 HSI 98
++
Sbjct: 394 RTL 396
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 39 RFWLVQLYASKTG*EVTMLSILCFVSVLCT-IHASVININI 158
RF+ +Y +K G V + +I V + C+ +H S++ I +
Sbjct: 98 RFYEQSVYNAKNGMLVYVNAIFAVVGIYCSVVHKSILQIGV 138
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,576,742
Number of Sequences: 5004
Number of extensions: 75273
Number of successful extensions: 212
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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