Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_H05
(873 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53340-7|AAA96211.2| 1383|Caenorhabditis elegans Npc1 (human nie... 40 0.002
U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein rec... 39 0.005
U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein. 36 0.029
AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor... 36 0.029
AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor medi... 36 0.029
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 35 0.066
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 35 0.066
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 35 0.066
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 35 0.066
Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical pr... 34 0.15
U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta p... 34 0.15
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 33 0.35
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein. 33 0.35
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 33 0.35
U64601-8|AAB04576.2| 413|Caenorhabditis elegans Hypothetical pr... 31 0.81
U56966-4|AAA98719.2| 906|Caenorhabditis elegans Ace(angiotensin... 31 0.81
U56966-3|AAU05584.1| 332|Caenorhabditis elegans Ace(angiotensin... 31 0.81
Z83218-4|CAB05690.2| 706|Caenorhabditis elegans Hypothetical pr... 31 1.1
U55369-1|AAK52175.1| 1247|Caenorhabditis elegans Cystic fibrosis... 31 1.4
Z82055-4|CAB04846.1| 330|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 30 1.9
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin pro... 30 2.5
Z47068-6|CAA87334.2| 272|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 3.3
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 3.3
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 29 3.3
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 29 3.3
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 29 3.3
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 3.3
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 29 4.3
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 29 4.3
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 29 4.3
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 29 5.7
Z47073-4|CAM33507.1| 954|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z47073-3|CAA87374.1| 999|Caenorhabditis elegans Hypothetical pr... 28 7.6
>U53340-7|AAA96211.2| 1383|Caenorhabditis elegans Npc1 (human
niemann pick c disease)related protein 1 protein.
Length = 1383
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +3
Query: 606 DRSSLKDCNSRGCDQSCRRIGFPGGVCVNGRCKCDIIANNNIADLDEDRSSLKDCNXRG 782
DRS+ + N GCD+S R+G+P C C + A N+ DLD+ ++S + CN G
Sbjct: 223 DRSTYMNVNFTGCDKSA-RVGWP--ACSTSECNKEEYA--NLIDLDDGKTSGQTCNVHG 276
Score = 33.9 bits (74), Expect = 0.15
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +3
Query: 465 NQSTLENCDMRECDQSCRRIGFPGGVCVNGRCKCDIIANNNIADLDGDRSSLKDCNSRG 641
++ST N + CD+S R +G+P C C + AN + DLD ++S + CN G
Sbjct: 223 DRSTYMNVNFTGCDKSAR-VGWPA--CSTSECNKEEYAN--LIDLDDGKTSGQTCNVHG 276
>U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein
receptor precursor protein.
Length = 925
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/90 (27%), Positives = 37/90 (41%)
Frame = +3
Query: 564 CDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIGFPGGVCVNGRCKCDIIANNNIADLD 743
C A + L G + C++ G SC R G GVC+ C+ I + D D
Sbjct: 239 CQTNAPSEEEYLSGQADHMHSCSAAGM-YSCGRKGSEIGVCIPMNATCNGIKECPLGD-D 296
Query: 744 EDRSSLKDCNXRGCDQSCRXIGFPGRCVRQ 833
E + +C + CD +C RC+ Q
Sbjct: 297 ESKHC-SECARKRCDHTCMNTPHGARCICQ 325
>U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein.
Length = 925
Score = 36.3 bits (80), Expect = 0.029
Identities = 24/90 (26%), Positives = 36/90 (40%)
Frame = +3
Query: 564 CDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIGFPGGVCVNGRCKCDIIANNNIADLD 743
C A + L G + C++ G SC G GVC+ C+ I + D D
Sbjct: 239 CQTNAPSEEEYLSGQADHMHSCSAAGM-YSCGTKGSEIGVCIPMNATCNGIKECPLGD-D 296
Query: 744 EDRSSLKDCNXRGCDQSCRXIGFPGRCVRQ 833
E + +C + CD +C RC+ Q
Sbjct: 297 ESKHC-SECARKRCDHTCMNTPHGARCICQ 325
>AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor
RME-2 protein.
Length = 925
Score = 36.3 bits (80), Expect = 0.029
Identities = 24/90 (26%), Positives = 36/90 (40%)
Frame = +3
Query: 564 CDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIGFPGGVCVNGRCKCDIIANNNIADLD 743
C A + L G + C++ G SC G GVC+ C+ I + D D
Sbjct: 239 CQTNAPSEEEYLSGQADHMHSCSAAGM-YSCGTKGSEIGVCIPMNATCNGIKECPLGD-D 296
Query: 744 EDRSSLKDCNXRGCDQSCRXIGFPGRCVRQ 833
E + +C + CD +C RC+ Q
Sbjct: 297 ESKHC-SECARKRCDHTCMNTPHGARCICQ 325
>AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor
mediated endocytosis protein2 protein.
Length = 925
Score = 36.3 bits (80), Expect = 0.029
Identities = 24/90 (26%), Positives = 36/90 (40%)
Frame = +3
Query: 564 CDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIGFPGGVCVNGRCKCDIIANNNIADLD 743
C A + L G + C++ G SC G GVC+ C+ I + D D
Sbjct: 239 CQTNAPSEEEYLSGQADHMHSCSAAGM-YSCGTKGSEIGVCIPMNATCNGIKECPLGD-D 296
Query: 744 EDRSSLKDCNXRGCDQSCRXIGFPGRCVRQ 833
E + +C + CD +C RC+ Q
Sbjct: 297 ESKHC-SECARKRCDHTCMNTPHGARCICQ 325
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 35.1 bits (77), Expect = 0.066
Identities = 39/187 (20%), Positives = 60/187 (32%)
Frame = +3
Query: 264 CDGEQCVCDNFLKTRGSRTKTDNQLPQLDCTTSECDQLCRRFGFSXXXXXXXXXXXXXXH 443
CD C+ ++ K + N +L C + C F F
Sbjct: 3924 CDDGTCIAEH--KWCDRKKDCPNAADELHCEDVS-RRTCSPFEFECANSVCIPRKFMCDG 3980
Query: 444 KNADLNENQSTLENCDMRECDQSCRRIGFPGGVCVNGRCKCDIIANNNIADLDGDRSSLK 623
N + + T C +CD R +C+N C+ + D + S+
Sbjct: 3981 DNDCGDNSDETSSECRSAQCDPPLRFRCAHSRLCLNILQLCNGFNDCGPNDFSDEHLSMC 4040
Query: 624 DCNSRGCDQSCRRIGFPGGVCVNGRCKCDIIANNNIADLDEDRSSLKDCNXRGCDQSCRX 803
S D S + G CVNG CD ++ D ++ C+ G SC
Sbjct: 4041 SSFSEYGDCSSDQFKCANGKCVNGTVACD--RKDDCGDASDEIG----CSKHGGKTSCEA 4094
Query: 804 IGFPGRC 824
G G C
Sbjct: 4095 FGNNGGC 4101
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/96 (28%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Frame = +3
Query: 543 CVNGRCKCDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIGFPG-GVCVNGRCKCDIIA 719
C N RC+ + D GD S +C C + PG G C++ CD
Sbjct: 230 CKNKRCQPRKFRCDYYDDC-GDNSDEDECGEYRCPPG--KWNCPGTGHCIDQLKLCD--G 284
Query: 720 NNNIAD-LDEDRSSLKDCNXRGCDQSCRXIGFPGRC 824
+ + AD DE + S C GC C G C
Sbjct: 285 SKDCADGADEQQCSQNLCPSLGCQAGCHPSPHGGEC 320
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 35.1 bits (77), Expect = 0.066
Identities = 39/187 (20%), Positives = 60/187 (32%)
Frame = +3
Query: 264 CDGEQCVCDNFLKTRGSRTKTDNQLPQLDCTTSECDQLCRRFGFSXXXXXXXXXXXXXXH 443
CD C+ ++ K + N +L C + C F F
Sbjct: 3924 CDDGTCIAEH--KWCDRKKDCPNAADELHCEDVS-RRTCSPFEFECANSVCIPRKFMCDG 3980
Query: 444 KNADLNENQSTLENCDMRECDQSCRRIGFPGGVCVNGRCKCDIIANNNIADLDGDRSSLK 623
N + + T C +CD R +C+N C+ + D + S+
Sbjct: 3981 DNDCGDNSDETSSECRSAQCDPPLRFRCAHSRLCLNILQLCNGFNDCGPNDFSDEHLSMC 4040
Query: 624 DCNSRGCDQSCRRIGFPGGVCVNGRCKCDIIANNNIADLDEDRSSLKDCNXRGCDQSCRX 803
S D S + G CVNG CD ++ D ++ C+ G SC
Sbjct: 4041 SSFSEYGDCSSDQFKCANGKCVNGTVACD--RKDDCGDASDEIG----CSKHGGKTSCEA 4094
Query: 804 IGFPGRC 824
G G C
Sbjct: 4095 FGNNGGC 4101
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/96 (28%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Frame = +3
Query: 543 CVNGRCKCDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIGFPG-GVCVNGRCKCDIIA 719
C N RC+ + D GD S +C C + PG G C++ CD
Sbjct: 230 CKNKRCQPRKFRCDYYDDC-GDNSDEDECGEYRCPPG--KWNCPGTGHCIDQLKLCD--G 284
Query: 720 NNNIAD-LDEDRSSLKDCNXRGCDQSCRXIGFPGRC 824
+ + AD DE + S C GC C G C
Sbjct: 285 SKDCADGADEQQCSQNLCPSLGCQAGCHPSPHGGEC 320
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 35.1 bits (77), Expect = 0.066
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Frame = +3
Query: 498 ECDQSCRRIGFPGGVC--VNGRCKCDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIGF 671
+C+++C G +C ++G C C + R LK R C QSCR
Sbjct: 1209 KCEETCECEN--GALCDPISGHCSCQPGWRGKKCN----RPCLKGYFGRHCSQSCRCANS 1262
Query: 672 PGGVCVNGRCKCDI-IANNNIADLDEDRSSLKDCNXR-GCDQSCRXIGFPGRC 824
++GRC+C A ++ +L D + + C+ + C ++ G+C
Sbjct: 1263 KSCDHISGRCQCPKGYAGHSCTELCPDGTFGESCSQKCDCGENSMCDAISGKC 1315
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 35.1 bits (77), Expect = 0.066
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Frame = +3
Query: 498 ECDQSCRRIGFPGGVC--VNGRCKCDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIGF 671
+C+++C G +C ++G C C + R LK R C QSCR
Sbjct: 1209 KCEETCECEN--GALCDPISGHCSCQPGWRGKKCN----RPCLKGYFGRHCSQSCRCANS 1262
Query: 672 PGGVCVNGRCKCDI-IANNNIADLDEDRSSLKDCNXR-GCDQSCRXIGFPGRC 824
++GRC+C A ++ +L D + + C+ + C ++ G+C
Sbjct: 1263 KSCDHISGRCQCPKGYAGHSCTELCPDGTFGESCSQKCDCGENSMCDAISGKC 1315
>Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical
protein ZK1058.2 protein.
Length = 809
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 537 GVCVNGRCKCDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIGFPGGVCVNGRCKC 707
GVC GRC+C+ AN + G+ +C++ C + R+I G C G+C C
Sbjct: 539 GVCNCGRCECNPRANPE-EQISGE---FCECDNFNCPRHDRKICAEHGECNCGKCIC 591
Score = 32.3 bits (70), Expect = 0.47
Identities = 34/154 (22%), Positives = 53/154 (34%), Gaps = 3/154 (1%)
Frame = +3
Query: 255 SGACDGEQCVCDNFLKTRGSRTKTDNQLPQLDCTTSECDQLCRRFGFSXXXXXXXXXXXX 434
S C+G VC + +G + + +T+ ++ C+R S
Sbjct: 486 SADCNGGDMVC-GVCRCKGGNVGKYCECNRPGMSTAALNEKCKRTNESAICEGRGVCNCG 544
Query: 435 XXHKNADLN-ENQSTLE--NCDMRECDQSCRRIGFPGGVCVNGRCKCDIIANNNIADLDG 605
N N E Q + E CD C + R+I G C G+C C +
Sbjct: 545 RCECNPRANPEEQISGEFCECDNFNCPRHDRKICAEHGECNCGKCICAPGWTGRACECPI 604
Query: 606 DRSSLKDCNSRGCDQSCRRIGFPGGVCVNGRCKC 707
S N + C+ G C+ GRC+C
Sbjct: 605 STDSCLSANGKICNGK--------GECICGRCRC 630
>U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta
pat-3 protein.
Length = 809
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 537 GVCVNGRCKCDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIGFPGGVCVNGRCKC 707
GVC GRC+C+ AN + G+ +C++ C + R+I G C G+C C
Sbjct: 539 GVCNCGRCECNPRANPE-EQISGE---FCECDNFNCPRHDRKICAEHGECNCGKCIC 591
Score = 32.3 bits (70), Expect = 0.47
Identities = 34/154 (22%), Positives = 53/154 (34%), Gaps = 3/154 (1%)
Frame = +3
Query: 255 SGACDGEQCVCDNFLKTRGSRTKTDNQLPQLDCTTSECDQLCRRFGFSXXXXXXXXXXXX 434
S C+G VC + +G + + +T+ ++ C+R S
Sbjct: 486 SADCNGGDMVC-GVCRCKGGNVGKYCECNRPGMSTAALNEKCKRTNESAICEGRGVCNCG 544
Query: 435 XXHKNADLN-ENQSTLE--NCDMRECDQSCRRIGFPGGVCVNGRCKCDIIANNNIADLDG 605
N N E Q + E CD C + R+I G C G+C C +
Sbjct: 545 RCECNPRANPEEQISGEFCECDNFNCPRHDRKICAEHGECNCGKCICAPGWTGRACECPI 604
Query: 606 DRSSLKDCNSRGCDQSCRRIGFPGGVCVNGRCKC 707
S N + C+ G C+ GRC+C
Sbjct: 605 STDSCLSANGKICNGK--------GECICGRCRC 630
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform a protein.
Length = 2560
Score = 32.7 bits (71), Expect = 0.35
Identities = 30/95 (31%), Positives = 39/95 (41%), Gaps = 17/95 (17%)
Frame = +3
Query: 474 TLENCDMRECDQSCRRIG-FPGGVCV-----NGRCKCDIIAN-NNIADLDG----DRSSL 620
T CD C C G F GG+CV G+ +C++ N +AD +G D
Sbjct: 339 TGRTCDEAVCPVVCSGNGVFSGGICVCKSGFKGK-ECEMRHNWCEVADCNGRGRCDTDGR 397
Query: 621 KDCNSRGCDQSCRRIGFPG------GVCVNGRCKC 707
CN ++C P GVCVNG C C
Sbjct: 398 CRCNPGWTGEACELRACPHASCHDRGVCVNGTCYC 432
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 2/108 (1%)
Frame = +3
Query: 501 CDQSCRRIGFPGGVCVNGRCKCDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIG-FPG 677
C+ +C + G CV+G+C C G + C+ C C G F G
Sbjct: 317 CESNCNQ----RGECVHGKCHC-------APGFTG-----RTCDEAVCPVVCSGNGVFSG 360
Query: 678 GVCVNGRCKCDIIANNNIADLDEDRSSLKDCNXRG-CDQSCRXIGFPG 818
G+CV CK ++ + + DCN RG CD R PG
Sbjct: 361 GICV---CKSGFKGKE--CEMRHNWCEVADCNGRGRCDTDGRCRCNPG 403
>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
Length = 2502
Score = 32.7 bits (71), Expect = 0.35
Identities = 30/95 (31%), Positives = 39/95 (41%), Gaps = 17/95 (17%)
Frame = +3
Query: 474 TLENCDMRECDQSCRRIG-FPGGVCV-----NGRCKCDIIAN-NNIADLDG----DRSSL 620
T CD C C G F GG+CV G+ +C++ N +AD +G D
Sbjct: 281 TGRTCDEAVCPVVCSGNGVFSGGICVCKSGFKGK-ECEMRHNWCEVADCNGRGRCDTDGR 339
Query: 621 KDCNSRGCDQSCRRIGFPG------GVCVNGRCKC 707
CN ++C P GVCVNG C C
Sbjct: 340 CRCNPGWTGEACELRACPHASCHDRGVCVNGTCYC 374
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 2/108 (1%)
Frame = +3
Query: 501 CDQSCRRIGFPGGVCVNGRCKCDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIG-FPG 677
C+ +C + G CV+G+C C G + C+ C C G F G
Sbjct: 259 CESNCNQ----RGECVHGKCHC-------APGFTG-----RTCDEAVCPVVCSGNGVFSG 302
Query: 678 GVCVNGRCKCDIIANNNIADLDEDRSSLKDCNXRG-CDQSCRXIGFPG 818
G+CV CK ++ + + DCN RG CD R PG
Sbjct: 303 GICV---CKSGFKGKE--CEMRHNWCEVADCNGRGRCDTDGRCRCNPG 345
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 32.7 bits (71), Expect = 0.35
Identities = 30/95 (31%), Positives = 39/95 (41%), Gaps = 17/95 (17%)
Frame = +3
Query: 474 TLENCDMRECDQSCRRIG-FPGGVCV-----NGRCKCDIIAN-NNIADLDG----DRSSL 620
T CD C C G F GG+CV G+ +C++ N +AD +G D
Sbjct: 463 TGRTCDEAVCPVVCSGNGVFSGGICVCKSGFKGK-ECEMRHNWCEVADCNGRGRCDTDGR 521
Query: 621 KDCNSRGCDQSCRRIGFPG------GVCVNGRCKC 707
CN ++C P GVCVNG C C
Sbjct: 522 CRCNPGWTGEACELRACPHASCHDRGVCVNGTCYC 556
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 2/108 (1%)
Frame = +3
Query: 501 CDQSCRRIGFPGGVCVNGRCKCDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIG-FPG 677
C+ +C + G CV+G+C C G + C+ C C G F G
Sbjct: 441 CESNCNQ----RGECVHGKCHC-------APGFTG-----RTCDEAVCPVVCSGNGVFSG 484
Query: 678 GVCVNGRCKCDIIANNNIADLDEDRSSLKDCNXRG-CDQSCRXIGFPG 818
G+CV CK ++ + + DCN RG CD R PG
Sbjct: 485 GICV---CKSGFKGKE--CEMRHNWCEVADCNGRGRCDTDGRCRCNPG 527
>U64601-8|AAB04576.2| 413|Caenorhabditis elegans Hypothetical
protein M03F4.6 protein.
Length = 413
Score = 31.5 bits (68), Expect = 0.81
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 540 VCVNGRCKCDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIGFPGGVCVNGRCKC 707
VC N RC C N D+D +R+++ SC+R P +C +G+C+C
Sbjct: 47 VCRNSRCTCP--TNFEEYDID-ERTTICRLAPAKIGDSCQRDCKPPLLCRDGKCEC 99
>U56966-4|AAA98719.2| 906|Caenorhabditis elegans Ace(angiotensin
converting enzyme)-like non-peptidase protein 1, isoform
a protein.
Length = 906
Score = 31.5 bits (68), Expect = 0.81
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 660 RIGFPGGVCVNGR-CKCDIIANNNIADLDEDRSSLKDCNXRGC 785
R+ FPGG CVNG+ C D N I ++ +L+ N C
Sbjct: 794 RVAFPGGECVNGQECLLDSHCNGTICVCNDGLYTLEIGNTFNC 836
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 519 RIGFPGGVCVNGR-CKCDIIANNNIADLDGDRSSLKDCNSRGC 644
R+ FPGG CVNG+ C D N I + +L+ N+ C
Sbjct: 794 RVAFPGGECVNGQECLLDSHCNGTICVCNDGLYTLEIGNTFNC 836
>U56966-3|AAU05584.1| 332|Caenorhabditis elegans Ace(angiotensin
converting enzyme)-like non-peptidase protein 1, isoform
b protein.
Length = 332
Score = 31.5 bits (68), Expect = 0.81
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 660 RIGFPGGVCVNGR-CKCDIIANNNIADLDEDRSSLKDCNXRGC 785
R+ FPGG CVNG+ C D N I ++ +L+ N C
Sbjct: 220 RVAFPGGECVNGQECLLDSHCNGTICVCNDGLYTLEIGNTFNC 262
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 519 RIGFPGGVCVNGR-CKCDIIANNNIADLDGDRSSLKDCNSRGC 644
R+ FPGG CVNG+ C D N I + +L+ N+ C
Sbjct: 220 RVAFPGGECVNGQECLLDSHCNGTICVCNDGLYTLEIGNTFNC 262
>Z83218-4|CAB05690.2| 706|Caenorhabditis elegans Hypothetical
protein C31A11.7 protein.
Length = 706
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 4/114 (3%)
Frame = -2
Query: 872 YIGGGYNVALHRPLTHTPX-RKSNXATRLIASSXITIFERRSIFIQISYIVVGYNVAFAS 696
+ G G L+ + H P R L+ + +F +R I I V+G+ VAF
Sbjct: 481 FFGNGNTNLLYDMIYHKPWIRCPPYLIGLLIGYGLAVFGQRKIRIHWFLAVIGWLVAFGL 540
Query: 695 SVDAHTAR---KSNSATRLIASSAITIFERRSISIQISYIVVGYNVAFASAIDA 543
+ + + + A + F R + SI +S+++V ++ + IDA
Sbjct: 541 GMACMFSTYDYDKGAYWSIFARATYYNFSRIAWSIAVSWVIVANHMGWGGPIDA 594
>U55369-1|AAK52175.1| 1247|Caenorhabditis elegans Cystic fibrosis
transmembrane conductanceregulator homolog protein 1
protein.
Length = 1247
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = -2
Query: 302 FEEIIANALFTIARATWKPKFTAELVTSRKVTVTQFN*SLICIQAFIKDVNV 147
FE+ + N++ TI +W+P F +L + R ++ F + I +F+ +NV
Sbjct: 267 FEKTVLNSMETIKMFSWEPHFWKKLKSMRGKELSVFR-KTLSINSFMHSLNV 317
>Z82055-4|CAB04846.1| 330|Caenorhabditis elegans Hypothetical
protein T26H2.4 protein.
Length = 330
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 436 IYTKMRT*MKINLPSKIVICENVIN 510
I T MRT +KINL ++V CE V+N
Sbjct: 53 IVTVMRTMLKINLHFRVVTCELVLN 77
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 12/93 (12%)
Frame = +3
Query: 597 LDGDRSSLKDCNSRGCDQSCRRIGFP-----------GGVCVN-GRCKCDIIANNNIADL 740
+D D S + C GC CR I P G C++ R C+ + N +
Sbjct: 758 VDDDCSGHQKCCFDGCGAGCRDIATPLIEISKEIFEKAGTCISEQRVLCNRL-EKNTCEY 816
Query: 741 DEDRSSLKDCNXRGCDQSCRXIGFPGRCVRQRT 839
D D + + C GC ++C +C+ ++T
Sbjct: 817 DTDCAGVAKCCDDGCVKACAYPLQTSKCLVRKT 849
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
T01D3.7 protein.
Length = 2882
Score = 29.9 bits (64), Expect = 2.5
Identities = 34/116 (29%), Positives = 42/116 (36%), Gaps = 13/116 (11%)
Frame = +3
Query: 480 ENCDMREC-DQSCRRIGFPGGVCVNGRCKCDIIANNNIADLDGDRSSLKDCNSRGCDQSC 656
E C + C D C G NG CKC+ G R + CNS + C
Sbjct: 852 ETCSVTSCIDSQCTH----GHCGTNGLCKCE-------DGWQGSRCQIPLCNSCSLNGIC 900
Query: 657 RRIGF------PGG----VCVNGRCK-CDIIANNNIAD-LDEDRSSLKDCNXRGCD 788
R GF GG CV C+ CD N+ I + L + S K CD
Sbjct: 901 TRPGFCSCFEDYGGSDCSKCVGDSCEACDFDCNHGICEPLTKTCSCAKGWMGGACD 956
>Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical
protein F33C8.1b protein.
Length = 1234
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 537 GVCVNGRCKCDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIGFP--GGVCVNGRCKC 707
G C+NG+C C+ DG + +C + C S + P G CV+GRC+C
Sbjct: 213 GSCLNGKCDCE----------DGYKGL--NCEYQVCQLSGKSTESPCHEGQCVDGRCEC 259
>Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical
protein F33C8.1a protein.
Length = 1271
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 537 GVCVNGRCKCDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIGFP--GGVCVNGRCKC 707
G C+NG+C C+ DG + +C + C S + P G CV+GRC+C
Sbjct: 213 GSCLNGKCDCE----------DGYKGL--NCEYQVCQLSGKSTESPCHEGQCVDGRCEC 259
>AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin
protein.
Length = 1329
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 537 GVCVNGRCKCDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIGFP--GGVCVNGRCKC 707
G C+NG+C C+ DG + +C + C S + P G CV+GRC+C
Sbjct: 213 GSCLNGKCDCE----------DGYKGL--NCEYQVCQLSGKSTESPCHEGQCVDGRCEC 259
>Z47068-6|CAA87334.2| 272|Caenorhabditis elegans Hypothetical
protein F15G9.5 protein.
Length = 272
Score = 29.5 bits (63), Expect = 3.3
Identities = 28/125 (22%), Positives = 46/125 (36%), Gaps = 9/125 (7%)
Frame = +3
Query: 450 ADLNENQSTLENCDMR---ECDQSCRRIGFPGGVCVNGRCKCDIIANNNIADLDGDRSSL 620
A + N + + C +R EC+ + C N +C ++NI +G+R
Sbjct: 48 ATVCRNNTCVSACSLRGMQECECDAEEDNYCYLCCGNSEHQCMAAHHHNILRPNGERWER 107
Query: 621 KDCNSRGCDQSCRRIGFP------GGVCVNGRCKCDIIANNNIADLDEDRSSLKDCNXRG 782
+ C SR G P +C+ GRC + + + DR K C
Sbjct: 108 EAC-SRCRMHGAELEGLPCDDTDSARLCIGGRCSNSVCHTKSPGSVC-DRKMEKLCVDNT 165
Query: 783 CDQSC 797
C+ C
Sbjct: 166 CENPC 170
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 29.5 bits (63), Expect = 3.3
Identities = 28/105 (26%), Positives = 39/105 (37%), Gaps = 3/105 (2%)
Frame = +3
Query: 543 CVNGRCKCDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIGFPGGVCVNGRCKCDIIAN 722
C+ G CD A +D D S + C S D S PG VCV + +C +N
Sbjct: 1028 CLTGEHDCDRSARC----IDTDESYICACQSGFIDHSPNPSERPGRVCVALQNECLDGSN 1083
Query: 723 N---NIADLDEDRSSLKDCNXRGCDQSCRXIGFPGRCVRQRTMQC 848
N D + + C D S FPG ++ +C
Sbjct: 1084 RCSPNALCTDTEEGYVCRCKSGFVDYSPNPQTFPGMVCKELVNEC 1128
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 29.5 bits (63), Expect = 3.3
Identities = 28/105 (26%), Positives = 39/105 (37%), Gaps = 3/105 (2%)
Frame = +3
Query: 543 CVNGRCKCDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIGFPGGVCVNGRCKCDIIAN 722
C+ G CD A +D D S + C S D S PG VCV + +C +N
Sbjct: 1612 CLTGEHDCDRSARC----IDTDESYICACQSGFIDHSPNPSERPGRVCVALQNECLDGSN 1667
Query: 723 N---NIADLDEDRSSLKDCNXRGCDQSCRXIGFPGRCVRQRTMQC 848
N D + + C D S FPG ++ +C
Sbjct: 1668 RCSPNALCTDTEEGYVCRCKSGFVDYSPNPQTFPGMVCKELVNEC 1712
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.5 bits (63), Expect = 3.3
Identities = 28/105 (26%), Positives = 39/105 (37%), Gaps = 3/105 (2%)
Frame = +3
Query: 543 CVNGRCKCDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIGFPGGVCVNGRCKCDIIAN 722
C+ G CD A +D D S + C S D S PG VCV + +C +N
Sbjct: 1028 CLTGEHDCDRSARC----IDTDESYICACQSGFIDHSPNPSERPGRVCVALQNECLDGSN 1083
Query: 723 N---NIADLDEDRSSLKDCNXRGCDQSCRXIGFPGRCVRQRTMQC 848
N D + + C D S FPG ++ +C
Sbjct: 1084 RCSPNALCTDTEEGYVCRCKSGFVDYSPNPQTFPGMVCKELVNEC 1128
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.5 bits (63), Expect = 3.3
Identities = 28/105 (26%), Positives = 39/105 (37%), Gaps = 3/105 (2%)
Frame = +3
Query: 543 CVNGRCKCDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIGFPGGVCVNGRCKCDIIAN 722
C+ G CD A +D D S + C S D S PG VCV + +C +N
Sbjct: 1612 CLTGEHDCDRSARC----IDTDESYICACQSGFIDHSPNPSERPGRVCVALQNECLDGSN 1667
Query: 723 N---NIADLDEDRSSLKDCNXRGCDQSCRXIGFPGRCVRQRTMQC 848
N D + + C D S FPG ++ +C
Sbjct: 1668 RCSPNALCTDTEEGYVCRCKSGFVDYSPNPQTFPGMVCKELVNEC 1712
>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical
protein R107.8 protein.
Length = 1429
Score = 29.5 bits (63), Expect = 3.3
Identities = 37/136 (27%), Positives = 53/136 (38%), Gaps = 15/136 (11%)
Frame = +3
Query: 486 CDMRECDQSCRRIG---FPGGVCVNGRCKC--DIIANNNIADLDGDRSSLKD--CNSRGC 644
CD+R C R G F GG C++G C C D N + +SSL + C S C
Sbjct: 453 CDLRLEIGICSRQGGKCFNGGKCLSGFCVCPPDFTGNQCEVNRKNGKSSLSENLCLSDPC 512
Query: 645 DQSCRRIGFPGGVCVNGRCKCDIIANNNIADLDEDRSSLKDCNXRG-CDQ-----SCR-X 803
+ I + C C +I + +D C+ G C Q SC
Sbjct: 513 MNNATCIDVDAH--IGYACICKQGFEGDICERHKDLCLENPCSNGGVCHQHRESFSCDCP 570
Query: 804 IGFPGR-CVRQRTMQC 848
GF G C +++ +C
Sbjct: 571 PGFYGNGCEQEKMFRC 586
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 29.5 bits (63), Expect = 3.3
Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 7/93 (7%)
Frame = +3
Query: 453 DLNENQSTLENCDMRECDQSCRRIGFPGGVCVNGRCKCDIIAN--NNIAD---LDGDRSS 617
+LN Q+ +C + C Q C G C N C C + NN+ D +
Sbjct: 1838 ELNPGQTCDPSCAYQPCMQRCSG----GSSCSNSICSCPQGSGVLNNVCSPSFPQNDNYN 1893
Query: 618 LKDCNSRG--CDQSCRRIGFPGGVCVNGRCKCD 710
L G CD + IG G C+ G C CD
Sbjct: 1894 LTRTARPGDSCDNTIVCIG--GSSCLIGTCLCD 1924
>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein (
C.elegans homeotic lin-12 protein gene, complete cds. ).
Length = 1429
Score = 29.5 bits (63), Expect = 3.3
Identities = 37/136 (27%), Positives = 53/136 (38%), Gaps = 15/136 (11%)
Frame = +3
Query: 486 CDMRECDQSCRRIG---FPGGVCVNGRCKC--DIIANNNIADLDGDRSSLKD--CNSRGC 644
CD+R C R G F GG C++G C C D N + +SSL + C S C
Sbjct: 453 CDLRLEIGICSRQGGKCFNGGKCLSGFCVCPPDFTGNQCEVNRKNGKSSLSENLCLSDPC 512
Query: 645 DQSCRRIGFPGGVCVNGRCKCDIIANNNIADLDEDRSSLKDCNXRG-CDQ-----SCR-X 803
+ I + C C +I + +D C+ G C Q SC
Sbjct: 513 MNNATCIDVDAH--IGYACICKQGFEGDICERHKDLCLENPCSNGGVCHQHRESFSCDCP 570
Query: 804 IGFPGR-CVRQRTMQC 848
GF G C +++ +C
Sbjct: 571 PGFYGNGCEQEKMFRC 586
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 29.5 bits (63), Expect = 3.3
Identities = 28/105 (26%), Positives = 39/105 (37%), Gaps = 3/105 (2%)
Frame = +3
Query: 543 CVNGRCKCDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRIGFPGGVCVNGRCKCDIIAN 722
C+ G CD A +D D S + C S D S PG VCV + +C +N
Sbjct: 1612 CLTGEHDCDRSARC----IDTDESYICACQSGFIDHSPNPSERPGRVCVALQNECLDGSN 1667
Query: 723 N---NIADLDEDRSSLKDCNXRGCDQSCRXIGFPGRCVRQRTMQC 848
N D + + C D S FPG ++ +C
Sbjct: 1668 RCSPNALCTDTEEGYVCRCKSGFVDYSPNPQTFPGMVCKELVNEC 1712
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 29.1 bits (62), Expect = 4.3
Identities = 39/134 (29%), Positives = 48/134 (35%), Gaps = 8/134 (5%)
Frame = +3
Query: 447 NADLNENQST--LENCDMRECDQSCRRIGFPGGVCVNGRCKCDIIANNNIADLDGDRSSL 620
NA L+ ST + C + C GG GRC +A N + DG
Sbjct: 148 NAKLHWECSTHGVRRCSAGWSGEDCSNPICAGGCSNRGRC----VAPNQCSCADG----- 198
Query: 621 KDCNSRGCDQSCRRIGFPGGVCVN---GRCKCDIIANNNIADLDEDRSSL-KDCNXRG-C 785
N C+Q R G G CVN CKC + D+D SL K C G C
Sbjct: 199 --FNGTRCEQCLPRAGCVNGDCVNETPNTCKCRDGFIGDRCDIDIKICSLEKPCANGGIC 256
Query: 786 D-QSCRXIGFPGRC 824
S G+ C
Sbjct: 257 SIDSSSSTGYKCHC 270
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 29.1 bits (62), Expect = 4.3
Identities = 39/134 (29%), Positives = 48/134 (35%), Gaps = 8/134 (5%)
Frame = +3
Query: 447 NADLNENQST--LENCDMRECDQSCRRIGFPGGVCVNGRCKCDIIANNNIADLDGDRSSL 620
NA L+ ST + C + C GG GRC +A N + DG
Sbjct: 148 NAKLHWECSTHGVRRCSAGWSGEDCSNPICAGGCSNRGRC----VAPNQCSCADG----- 198
Query: 621 KDCNSRGCDQSCRRIGFPGGVCVN---GRCKCDIIANNNIADLDEDRSSL-KDCNXRG-C 785
N C+Q R G G CVN CKC + D+D SL K C G C
Sbjct: 199 --FNGTRCEQCLPRAGCVNGDCVNETPNTCKCRDGFIGDRCDIDIKICSLEKPCANGGIC 256
Query: 786 D-QSCRXIGFPGRC 824
S G+ C
Sbjct: 257 SIDSSSSTGYKCHC 270
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 29.1 bits (62), Expect = 4.3
Identities = 35/172 (20%), Positives = 57/172 (33%), Gaps = 7/172 (4%)
Frame = +3
Query: 201 RNCDFTACDQLCRELGFPSGACDGEQCVCDNFLKTRGSRTKTDNQLPQLDCTTSECDQLC 380
R C+ C + C +GE C F T + Q C T+ C+ +C
Sbjct: 1671 RQCEINECSETC---------WNGETCAVQEFGSTTNVVCHCPSNYTQSSCATNVCEGVC 1721
Query: 381 RRFGFSXXXXXXXXXXXXXXHKNADLNENQSTLENCDMRECDQSCRRIGFPGGVC----- 545
G + + ++ T +C + + C F GG C
Sbjct: 1722 GPRGSCKTVPCPKDEPHCRSYSFCECDKGW-TGPHCRHKADAKVCYGHCFSGGACDGEGP 1780
Query: 546 VNGRCKC-DIIANNNIADLDGDRSSLKDCNSRG-CDQSCRRIGFPGGVCVNG 695
+N RC C D + N + G +C + G C + P +C +G
Sbjct: 1781 LNLRCSCGDGLTGNRCQNCVG-----HECLNGGFCSYANSNRSLPHCICPSG 1827
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily assigned
gene nameprotein 162 protein.
Length = 2643
Score = 28.7 bits (61), Expect = 5.7
Identities = 26/114 (22%), Positives = 40/114 (35%), Gaps = 9/114 (7%)
Frame = +3
Query: 486 CDMRECDQSCRRIGFPGGVCVNGRCKCDIIANNNIADLDGDRSSLKDCNSRGCDQSCRRI 665
C CD + G C++ + +CD + D GD S K C D++ R
Sbjct: 1175 CPPSMCDSTTHLSCLNGQKCISKQLECDGV------DDCGDNSDEKHCTEIRLDEAALRC 1228
Query: 666 GFPGGVCVNGRCKC----DIIANNNIADLDEDRS-----SLKDCNXRGCDQSCR 800
P C KC + N + +D + D + GC +CR
Sbjct: 1229 QSPMYQCDGPNFKCISDKHLCDGTNDCEEGDDEGLWCTFNCTDADDLGCSHTCR 1282
>Z47073-4|CAM33507.1| 954|Caenorhabditis elegans Hypothetical
protein ZC506.4b protein.
Length = 954
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Frame = -3
Query: 394 NPNLRHN*SHSDVVQSS*GSWLSVFVREPRVLR--KLSQTHCSPSHAPLGNPSSRQSWSQ 221
+PNL+ +V GS+ SV V+ +LR +++Q + ++A L + + + +++
Sbjct: 136 DPNLKKQSQKKNVAAVVGGSYSSVSVQLANLLRLFRIAQVSPASTNADLSDKNRFEYFAR 195
Query: 220 AVKS---QLRNLIEVLFVFKPSLKMLMFITD 137
V S Q ++E+ FK S L++ D
Sbjct: 196 TVPSDDYQAMAMVEIAVKFKWSYVSLVYSAD 226
>Z47073-3|CAA87374.1| 999|Caenorhabditis elegans Hypothetical
protein ZC506.4a protein.
Length = 999
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Frame = -3
Query: 394 NPNLRHN*SHSDVVQSS*GSWLSVFVREPRVLR--KLSQTHCSPSHAPLGNPSSRQSWSQ 221
+PNL+ +V GS+ SV V+ +LR +++Q + ++A L + + + +++
Sbjct: 181 DPNLKKQSQKKNVAAVVGGSYSSVSVQLANLLRLFRIAQVSPASTNADLSDKNRFEYFAR 240
Query: 220 AVKS---QLRNLIEVLFVFKPSLKMLMFITD 137
V S Q ++E+ FK S L++ D
Sbjct: 241 TVPSDDYQAMAMVEIAVKFKWSYVSLVYSAD 271
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,335,982
Number of Sequences: 27780
Number of extensions: 456679
Number of successful extensions: 1475
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1426
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -