Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_H04
(875 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 79 4e-15
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 79 4e-15
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 71 1e-12
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 71 1e-12
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 69 3e-12
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 69 3e-12
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 69 3e-12
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 69 3e-12
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 69 3e-12
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 69 3e-12
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 67 1e-11
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 66 3e-11
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 54 1e-07
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 54 1e-07
U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein ... 46 5e-05
AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or cys... 43 3e-04
Z83113-4|CAB05546.2| 1020|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF180730-1|AAF06159.1| 1020|Caenorhabditis elegans RNA interfere... 31 1.4
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 30 1.9
U23514-6|AAC46544.2| 816|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z75547-14|CAA99901.2| 461|Caenorhabditis elegans Hypothetical p... 29 4.4
Z68752-4|CAA92983.1| 447|Caenorhabditis elegans Hypothetical pr... 28 7.6
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 79.0 bits (186), Expect = 4e-15
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Frame = +3
Query: 480 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 659
++N+ ++F +A++IN++V ENT IK ++NPDS+S AVL NA YFK W
Sbjct: 118 LYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANW 177
Query: 660 SSKFDERLTSEP*LLREQRQNNQSTMMYKR-GDYKYGESAVLNXQLIEIPYK 812
+KF + T + + ++ ++ R + KY E+ Q++ +PYK
Sbjct: 178 QTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENG--QFQVLSLPYK 227
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 79.0 bits (186), Expect = 4e-15
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Frame = +3
Query: 480 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 659
++N+ ++F +A++IN++V ENT IK ++NPDS+S AVL NA YFK W
Sbjct: 118 LYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANW 177
Query: 660 SSKFDERLTSEP*LLREQRQNNQSTMMYKR-GDYKYGESAVLNXQLIEIPYK 812
+KF + T + + ++ ++ R + KY E+ Q++ +PYK
Sbjct: 178 QTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENG--QFQVLSLPYK 227
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 70.9 bits (166), Expect = 1e-12
Identities = 38/110 (34%), Positives = 61/110 (55%)
Frame = +3
Query: 483 FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWS 662
+N++ IDF K+ AAK +N ++ E+T +I D++ PD+L A+L+NAI+F+G W
Sbjct: 116 YNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMIKPDNLKDVD-AILINAIFFQGDWR 174
Query: 663 SKFDERLTSEP*LLREQRQNNQSTMMYKRGDYKYGESAVLNXQLIEIPYK 812
KF E +E +N M+ + DY Y + Q+I IP+K
Sbjct: 175 RKFGE--PAESNFSISATENRLVPMLRETRDYFYNKDD--EWQVIGIPFK 220
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 70.9 bits (166), Expect = 1e-12
Identities = 38/110 (34%), Positives = 61/110 (55%)
Frame = +3
Query: 483 FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWS 662
+N++ IDF K+ AAK +N ++ E+T +I D++ PD+L A+L+NAI+F+G W
Sbjct: 116 YNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMIKPDNLKDVD-AILINAIFFQGDWR 174
Query: 663 SKFDERLTSEP*LLREQRQNNQSTMMYKRGDYKYGESAVLNXQLIEIPYK 812
KF E +E +N M+ + DY Y + Q+I IP+K
Sbjct: 175 RKFGE--PAESNFSISATENRLVPMLRETRDYFYNKDD--EWQVIGIPFK 220
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 69.3 bits (162), Expect = 3e-12
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Frame = +3
Query: 453 RILQSFPGDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 623
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 624 VLVNAIYFKGAWSSKFDERLTSEP*LLREQRQNNQSTMMYKRG-DYKYGESAVLNXQLIE 800
VL NA+YFK W +KF + T + + ++ Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAEND--QFQVLS 214
Query: 801 IPYK 812
+PYK
Sbjct: 215 LPYK 218
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 69.3 bits (162), Expect = 3e-12
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Frame = +3
Query: 453 RILQSFPGDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 623
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 624 VLVNAIYFKGAWSSKFDERLTSEP*LLREQRQNNQSTMMYKRG-DYKYGESAVLNXQLIE 800
VL NA+YFK W +KF + T + + ++ Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAEND--QFQVLS 214
Query: 801 IPYK 812
+PYK
Sbjct: 215 LPYK 218
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 69.3 bits (162), Expect = 3e-12
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Frame = +3
Query: 453 RILQSFPGDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 623
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 624 VLVNAIYFKGAWSSKFDERLTSEP*LLREQRQNNQSTMMYKRG-DYKYGESAVLNXQLIE 800
VL NA+YFK W +KF + T + + ++ Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAEND--QFQVLS 214
Query: 801 IPYK 812
+PYK
Sbjct: 215 LPYK 218
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 69.3 bits (162), Expect = 3e-12
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Frame = +3
Query: 453 RILQSFPGDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 623
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 624 VLVNAIYFKGAWSSKFDERLTSEP*LLREQRQNNQSTMMYKRG-DYKYGESAVLNXQLIE 800
VL NA+YFK W +KF + T + + ++ Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAEND--QFQVLS 214
Query: 801 IPYK 812
+PYK
Sbjct: 215 LPYK 218
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 69.3 bits (162), Expect = 3e-12
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Frame = +3
Query: 453 RILQSFPGDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 623
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 624 VLVNAIYFKGAWSSKFDERLTSEP*LLREQRQNNQSTMMYKRG-DYKYGESAVLNXQLIE 800
VL NA+YFK W +KF + T + + ++ Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAEND--QFQVLS 214
Query: 801 IPYK 812
+PYK
Sbjct: 215 LPYK 218
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 69.3 bits (162), Expect = 3e-12
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Frame = +3
Query: 453 RILQSFPGDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 623
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 624 VLVNAIYFKGAWSSKFDERLTSEP*LLREQRQNNQSTMMYKRG-DYKYGESAVLNXQLIE 800
VL NA+YFK W +KF + T + + ++ Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAEND--QFQVLS 214
Query: 801 IPYK 812
+PYK
Sbjct: 215 LPYK 218
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 67.3 bits (157), Expect = 1e-11
Identities = 36/110 (32%), Positives = 65/110 (59%)
Frame = +3
Query: 480 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 659
++ + +++DFS+ AAK++N +VE +TN +IKDL+ DS ++A A LVNA+YFK W
Sbjct: 105 LYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIPADSANNA-FAFLVNAMYFKADW 163
Query: 660 SSKFDERLTSEP*LLREQRQNNQSTMMYKRGDYKYGESAVLNXQLIEIPY 809
SKF + T+ + ++ Q + + +++ VL Q++ + Y
Sbjct: 164 QSKFAKESTTGREFFTSEAESRQIPFLTELDEHRDYTEDVL-FQVLSLKY 212
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 230 SIVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSI-KGVEL 406
S+VLS S+ LA + + G T +EL +G I EF+ + GVE
Sbjct: 24 SVVLSPLSISLGLALIHAGACGSTQKELEDVLG---GSRIFEEFSGLMEAVGDTDNGVET 80
Query: 407 KMANKVYVHDGGKLDENF 460
K+ N+V+V+ + +++
Sbjct: 81 KIVNRVFVNQAYTIHQDY 98
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 66.1 bits (154), Expect = 3e-11
Identities = 36/110 (32%), Positives = 64/110 (58%)
Frame = +3
Query: 480 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 659
++ + +++DFS+ AAK++N +VE +TN +IKDL+ DS ++A A LVNA+YFK W
Sbjct: 105 LYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIPADSANNA-FAFLVNAMYFKADW 163
Query: 660 SSKFDERLTSEP*LLREQRQNNQSTMMYKRGDYKYGESAVLNXQLIEIPY 809
SKF + T+ + ++ Q + +++ VL Q++ + Y
Sbjct: 164 QSKFAKESTTGREFFTSEAESRQIPFLTDVDEHRDYTEDVL-FQVLSLKY 212
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 230 SIVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSI-KGVEL 406
S+VLS S+ LA + + G T +EL +G I EF+ + GVE
Sbjct: 24 SVVLSPLSISLGLALIHAGACGSTQKELEDVLG---GSRIFEEFSGLMEAVGDTDNGVET 80
Query: 407 KMANKVYVHDGGKLDENF 460
K+ N+V+V+ + +++
Sbjct: 81 KIVNRVFVNQAYTIHQDY 98
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +3
Query: 483 FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWS 662
+ +D +++D + A + IN +V TN +IK++ DS+ A A +L+N+IYFK W
Sbjct: 109 YGADAKSLDLT-TPAAVQEINSFVNTATNGKIKNIATQDSIKDAIA-LLINSIYFKADWD 166
Query: 663 SKFDERLTSE 692
KFD SE
Sbjct: 167 DKFDGMSVSE 176
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +2
Query: 218 IQGKSIVLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRTEFASKSRDLRS- 388
+ +S+V S S+ L+ + G + +++ + G D+ + F+ S+++++
Sbjct: 19 VHNESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVE-HFSFVSKEVKNG 77
Query: 389 IKGVELKMANKVYVHDGGKLDENF 460
KGVE+ +ANKVY+ G ++ F
Sbjct: 78 TKGVEVYLANKVYLKKGFTVNPTF 101
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +3
Query: 483 FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWS 662
+ +D +++D + A + IN +V TN +IK++ DS+ A A +L+N+IYFK W
Sbjct: 109 YGADAKSLDLT-TPAAVQEINSFVNTATNGKIKNIATQDSIKDAIA-LLINSIYFKADWD 166
Query: 663 SKFDERLTSE 692
KFD SE
Sbjct: 167 DKFDGMSVSE 176
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +2
Query: 218 IQGKSIVLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRTEFASKSRDLRS- 388
+ +S+V S S+ L+ + G + +++ + G D+ + F+ S+++++
Sbjct: 19 VHNESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVE-HFSFVSKEVKNG 77
Query: 389 IKGVELKMANKVYVHDGGKLDENF 460
KGVE+ +ANKVY+ G ++ F
Sbjct: 78 TKGVEVYLANKVYLKKGFTVNPTF 101
>U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein 8
protein.
Length = 339
Score = 45.6 bits (103), Expect = 5e-05
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +3
Query: 480 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 659
++N +V + D K+IN + ENT+ IK + S+ V ++A F+ W
Sbjct: 110 LYNCEVSSHDLDNEKETIKTINKLIRENTDGHIKKINTKISIDKDQVVVFLSAACFEAQW 169
Query: 660 SSKFDERLTSEP*LLREQRQNNQSTMMYKRG-DYKYGESAVLNXQLIEIPY 809
+KF + TS+ + ++ G + KY E+ Q++ +PY
Sbjct: 170 QNKFHKLSTSKKEFFCTANSHRNIKFLHATGANRKYCEND--KFQVLSLPY 218
>AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 199
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +3
Query: 480 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 659
++N +V + D K+IN + ENT+ IK + S+ V ++A F+ W
Sbjct: 109 LYNCEVSSHDLDNEKETIKTINKLIRENTDGHIKKINTKISIDKDQVVVFLSAACFEAQW 168
Query: 660 SSKFDERLTSE 692
+KF + TS+
Sbjct: 169 QNKFHKLSTSK 179
>Z83113-4|CAB05546.2| 1020|Caenorhabditis elegans Hypothetical protein
K08H10.7 protein.
Length = 1020
Score = 30.7 bits (66), Expect = 1.4
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Frame = +3
Query: 420 KYTFMMVE--N*TRILQSFPGD--VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDL 587
KYTF++++ + TR+L+ D V N D+ ++ VA ++ W E+ ++ +
Sbjct: 838 KYTFIVIQKRHNTRLLRRMEKDKPVVNKDLTP---AETDVAVAAVKQWEEDMKESKETGI 894
Query: 588 VNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSEP*LLREQRQNNQSTMMYKRG 752
VNP S T L+ + Y KFD L S +L R + + M +G
Sbjct: 895 VNPS--SGTTVDKLIVSKY-------KFDFFLASHHGVLGTSRPGHYTVMYDDKG 940
>AF180730-1|AAF06159.1| 1020|Caenorhabditis elegans RNA interference
promoting factorRDE-1 protein.
Length = 1020
Score = 30.7 bits (66), Expect = 1.4
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Frame = +3
Query: 420 KYTFMMVE--N*TRILQSFPGD--VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDL 587
KYTF++++ + TR+L+ D V N D+ ++ VA ++ W E+ ++ +
Sbjct: 838 KYTFIVIQKRHNTRLLRRMEKDKPVVNKDLTP---AETDVAVAAVKQWEEDMKESKETGI 894
Query: 588 VNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSEP*LLREQRQNNQSTMMYKRG 752
VNP S T L+ + Y KFD L S +L R + + M +G
Sbjct: 895 VNPS--SGTTVDKLIVSKY-------KFDFFLASHHGVLGTSRPGHYTVMYDDKG 940
>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
protein R05D3.1 protein.
Length = 1053
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 287 SDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENFAV 466
SD + H K G DDDAIR F D R K + N++ D GK + ++
Sbjct: 531 SDLDHHTVNFKYTGTTDDDAIRMAFDRDKSDER--KEWIRRSENEITNEDDGKTEISYQE 588
Query: 467 VSRGRL-QFG 493
G+L QFG
Sbjct: 589 FVDGQLMQFG 598
>U23514-6|AAC46544.2| 816|Caenorhabditis elegans Hypothetical
protein F48E8.4 protein.
Length = 816
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +1
Query: 10 NYDLTIGNSLRFWSVSLDIRETQATNMKTIICLFTIAIAAMAAVTNLSNVLKNGNDNFTA 189
+YD IG + +++ LDIR+ A+N+ + I + NL V G F
Sbjct: 30 SYDANIGENFLWFAPELDIRKVTASNIDDLEKRIVNRIPDDSTEQNLMFVTSKGGQKFAC 89
Query: 190 RM--FTEVVKNNPGXKHCPLGIFGAA 261
+ +V K+ P P I+G A
Sbjct: 90 SLPDVEDVKKDKPKSSKNP-KIYGDA 114
>Z75547-14|CAA99901.2| 461|Caenorhabditis elegans Hypothetical
protein R11D1.7 protein.
Length = 461
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = -1
Query: 215 FFTTSVNILAVKLSFPFLSTLERFVTAAIAAMA--IVNKQMI-VFMFVACVSRMSRLTLQ 45
F +V +LA +F F S + + +A +A + + Q++ +F+F+ C + RLT++
Sbjct: 102 FLAITVFLLAAFFTFAFFSICQWVIEDPLALLASRLFSYQIVQIFLFLFCTISVIRLTMR 161
Query: 44 NLKE 33
+E
Sbjct: 162 QDRE 165
>Z68752-4|CAA92983.1| 447|Caenorhabditis elegans Hypothetical
protein T12G3.4 protein.
Length = 447
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 159 HIREICDGCHCRDGDSKQTNDCLHVCGLRLSNV 61
H ++ G H DG K+ N C GLRLS+V
Sbjct: 147 HAVQLAQGNHDCDGSYKKMNLCGRPLGLRLSDV 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,642,247
Number of Sequences: 27780
Number of extensions: 376721
Number of successful extensions: 1174
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -