Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_G23
(888 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M13934-2|AAB59505.1| 151|Homo sapiens ribosomal protein S14 pro... 99 2e-20
BC091474-1|AAH91474.1| 151|Homo sapiens ribosomal protein S14 p... 99 2e-20
BC020515-1|AAH20515.1| 151|Homo sapiens ribosomal protein S14 p... 99 2e-20
BC006784-1|AAH06784.1| 151|Homo sapiens ribosomal protein S14 p... 99 2e-20
BC003401-1|AAH03401.1| 151|Homo sapiens ribosomal protein S14 p... 99 2e-20
BC001126-1|AAH01126.1| 151|Homo sapiens ribosomal protein S14 p... 99 2e-20
BC072682-1|AAH72682.1| 170|Homo sapiens similar to ribosomal pr... 92 3e-18
>M13934-2|AAB59505.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 99.1 bits (236), Expect = 2e-20
Identities = 51/78 (65%), Positives = 54/78 (69%)
Frame = +2
Query: 254 TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXX 433
TGGMKVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA AQ
Sbjct: 57 TGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSAL 116
Query: 434 XXXXXXXMKIGXIEDVTP 487
MKIG IEDVTP
Sbjct: 117 RALARSGMKIGRIEDVTP 134
Score = 89.0 bits (211), Expect = 2e-17
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = +1
Query: 85 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARV 252
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RV
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRV 56
>BC091474-1|AAH91474.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 99.1 bits (236), Expect = 2e-20
Identities = 51/78 (65%), Positives = 54/78 (69%)
Frame = +2
Query: 254 TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXX 433
TGGMKVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA AQ
Sbjct: 57 TGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSAL 116
Query: 434 XXXXXXXMKIGXIEDVTP 487
MKIG IEDVTP
Sbjct: 117 RALARSGMKIGRIEDVTP 134
Score = 89.0 bits (211), Expect = 2e-17
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = +1
Query: 85 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARV 252
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RV
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRV 56
>BC020515-1|AAH20515.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 99.1 bits (236), Expect = 2e-20
Identities = 51/78 (65%), Positives = 54/78 (69%)
Frame = +2
Query: 254 TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXX 433
TGGMKVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA AQ
Sbjct: 57 TGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSAL 116
Query: 434 XXXXXXXMKIGXIEDVTP 487
MKIG IEDVTP
Sbjct: 117 RALARSGMKIGRIEDVTP 134
Score = 89.0 bits (211), Expect = 2e-17
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = +1
Query: 85 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARV 252
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RV
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRV 56
>BC006784-1|AAH06784.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 99.1 bits (236), Expect = 2e-20
Identities = 51/78 (65%), Positives = 54/78 (69%)
Frame = +2
Query: 254 TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXX 433
TGGMKVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA AQ
Sbjct: 57 TGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSAL 116
Query: 434 XXXXXXXMKIGXIEDVTP 487
MKIG IEDVTP
Sbjct: 117 RALARSGMKIGRIEDVTP 134
Score = 89.0 bits (211), Expect = 2e-17
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = +1
Query: 85 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARV 252
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RV
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRV 56
>BC003401-1|AAH03401.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 99.1 bits (236), Expect = 2e-20
Identities = 51/78 (65%), Positives = 54/78 (69%)
Frame = +2
Query: 254 TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXX 433
TGGMKVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA AQ
Sbjct: 57 TGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSAL 116
Query: 434 XXXXXXXMKIGXIEDVTP 487
MKIG IEDVTP
Sbjct: 117 RALARSGMKIGRIEDVTP 134
Score = 89.0 bits (211), Expect = 2e-17
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = +1
Query: 85 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARV 252
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RV
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRV 56
>BC001126-1|AAH01126.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 99.1 bits (236), Expect = 2e-20
Identities = 51/78 (65%), Positives = 54/78 (69%)
Frame = +2
Query: 254 TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXX 433
TGGMKVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA AQ
Sbjct: 57 TGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSAL 116
Query: 434 XXXXXXXMKIGXIEDVTP 487
MKIG IEDVTP
Sbjct: 117 RALARSGMKIGRIEDVTP 134
Score = 89.0 bits (211), Expect = 2e-17
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = +1
Query: 85 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARV 252
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RV
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRV 56
>BC072682-1|AAH72682.1| 170|Homo sapiens similar to ribosomal
protein S14 protein.
Length = 170
Score = 91.9 bits (218), Expect = 3e-18
Identities = 47/78 (60%), Positives = 51/78 (65%)
Frame = +2
Query: 254 TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXX 433
TGGMKVKADRDE+SPYAAML QDVA++CK LGI ALHI+LRA AQ
Sbjct: 57 TGGMKVKADRDESSPYAAMLTTQDVAQRCKELGIIALHIQLRATGGNRTKTLGPGAQSAL 116
Query: 434 XXXXXXXMKIGXIEDVTP 487
MKIG IEDVTP
Sbjct: 117 RALACSGMKIGRIEDVTP 134
Score = 84.6 bits (200), Expect = 4e-16
Identities = 40/56 (71%), Positives = 43/56 (76%)
Frame = +1
Query: 85 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARV 252
MAP K K KEE + LGPQ GE VFGV HIFASFNDTFVHVTDLSG++TI RV
Sbjct: 1 MAPGKGKEKKEEQVINLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKQTICRV 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,473,775
Number of Sequences: 237096
Number of extensions: 2043906
Number of successful extensions: 3968
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3965
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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