Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_G23
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M21045-2|AAA28853.1|  151|Drosophila melanogaster protein ( D.me...   105   1e-22
M21045-1|AAA28852.1|  151|Drosophila melanogaster protein ( D.me...   105   1e-22
AY071321-1|AAL48943.1|  151|Drosophila melanogaster RE34379p pro...   105   1e-22
AE014298-1091|AAF46299.1|  151|Drosophila melanogaster CG1527-PA...   105   1e-22
AE014298-1090|AAF46297.1|  151|Drosophila melanogaster CG1524-PB...   105   1e-22
AE014298-1089|AAF46298.1|  151|Drosophila melanogaster CG1524-PA...   105   1e-22
AY070665-1|AAL48136.1|  123|Drosophila melanogaster RH04612p pro...    97   2e-20

>M21045-2|AAA28853.1|  151|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S14 A and B genes,
           complete cds. ).
          Length = 151

 Score =  105 bits (251), Expect = 1e-22
 Identities = 55/78 (70%), Positives = 55/78 (70%)
 Frame = +2

Query: 254 TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXX 433
           TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA            AQ   
Sbjct: 57  TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSAL 116

Query: 434 XXXXXXXMKIGXIEDVTP 487
                  MKIG IEDVTP
Sbjct: 117 RALARSSMKIGRIEDVTP 134



 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 48/56 (85%), Positives = 49/56 (87%)
 Frame = +1

Query: 85  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARV 252
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARV
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARV 56


>M21045-1|AAA28852.1|  151|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S14 A and B genes,
           complete cds. ).
          Length = 151

 Score =  105 bits (251), Expect = 1e-22
 Identities = 55/78 (70%), Positives = 55/78 (70%)
 Frame = +2

Query: 254 TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXX 433
           TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA            AQ   
Sbjct: 57  TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSAL 116

Query: 434 XXXXXXXMKIGXIEDVTP 487
                  MKIG IEDVTP
Sbjct: 117 RALARSSMKIGRIEDVTP 134



 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 48/56 (85%), Positives = 49/56 (87%)
 Frame = +1

Query: 85  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARV 252
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARV
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARV 56


>AY071321-1|AAL48943.1|  151|Drosophila melanogaster RE34379p
           protein.
          Length = 151

 Score =  105 bits (251), Expect = 1e-22
 Identities = 55/78 (70%), Positives = 55/78 (70%)
 Frame = +2

Query: 254 TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXX 433
           TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA            AQ   
Sbjct: 57  TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSAL 116

Query: 434 XXXXXXXMKIGXIEDVTP 487
                  MKIG IEDVTP
Sbjct: 117 RALARSSMKIGRIEDVTP 134



 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 48/56 (85%), Positives = 49/56 (87%)
 Frame = +1

Query: 85  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARV 252
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARV
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARV 56


>AE014298-1091|AAF46299.1|  151|Drosophila melanogaster CG1527-PA
           protein.
          Length = 151

 Score =  105 bits (251), Expect = 1e-22
 Identities = 55/78 (70%), Positives = 55/78 (70%)
 Frame = +2

Query: 254 TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXX 433
           TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA            AQ   
Sbjct: 57  TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSAL 116

Query: 434 XXXXXXXMKIGXIEDVTP 487
                  MKIG IEDVTP
Sbjct: 117 RALARSSMKIGRIEDVTP 134



 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 48/56 (85%), Positives = 49/56 (87%)
 Frame = +1

Query: 85  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARV 252
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARV
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARV 56


>AE014298-1090|AAF46297.1|  151|Drosophila melanogaster CG1524-PB,
           isoform B protein.
          Length = 151

 Score =  105 bits (251), Expect = 1e-22
 Identities = 55/78 (70%), Positives = 55/78 (70%)
 Frame = +2

Query: 254 TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXX 433
           TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA            AQ   
Sbjct: 57  TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSAL 116

Query: 434 XXXXXXXMKIGXIEDVTP 487
                  MKIG IEDVTP
Sbjct: 117 RALARSSMKIGRIEDVTP 134



 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 48/56 (85%), Positives = 49/56 (87%)
 Frame = +1

Query: 85  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARV 252
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARV
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARV 56


>AE014298-1089|AAF46298.1|  151|Drosophila melanogaster CG1524-PA,
           isoform A protein.
          Length = 151

 Score =  105 bits (251), Expect = 1e-22
 Identities = 55/78 (70%), Positives = 55/78 (70%)
 Frame = +2

Query: 254 TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXX 433
           TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA            AQ   
Sbjct: 57  TGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSAL 116

Query: 434 XXXXXXXMKIGXIEDVTP 487
                  MKIG IEDVTP
Sbjct: 117 RALARSSMKIGRIEDVTP 134



 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 48/56 (85%), Positives = 49/56 (87%)
 Frame = +1

Query: 85  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARV 252
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARV
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARV 56


>AY070665-1|AAL48136.1|  123|Drosophila melanogaster RH04612p
           protein.
          Length = 123

 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 48/56 (85%), Positives = 49/56 (87%)
 Frame = +1

Query: 85  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARV 252
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARV
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARV 56



 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = +2

Query: 254 TGGMKVKADRDEASPYAAM 310
           TGGMKVKADRDEASPYAAM
Sbjct: 57  TGGMKVKADRDEASPYAAM 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,555,670
Number of Sequences: 53049
Number of extensions: 612984
Number of successful extensions: 1205
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)