Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_G20
(895 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 40 0.003
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 39 0.006
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 38 0.007
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 36 0.039
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 35 0.090
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.12
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.12
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.12
Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical pr... 33 0.21
AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical ... 33 0.21
AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical ... 33 0.21
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 33 0.36
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 32 0.48
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 32 0.64
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 32 0.64
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 32 0.64
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 32 0.64
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 32 0.64
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 32 0.64
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 31 0.84
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 1.1
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.1
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 31 1.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.5
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 1.9
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 30 1.9
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 30 1.9
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 1.9
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 1.9
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 1.9
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 1.9
Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.6
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 30 2.6
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 30 2.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 29 3.4
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 3.4
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 4.5
AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying de... 29 4.5
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 29 4.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.5
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 5.9
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 29 5.9
Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 28 7.8
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 7.8
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 28 7.8
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 28 7.8
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 28 7.8
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 28 7.8
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 28 7.8
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 28 7.8
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 28 7.8
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 28 7.8
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 7.8
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +2
Query: 125 LCWLWPTLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHI---TW 295
LC+LW L T T T T T+ + T T++++ TTT +TTV + T
Sbjct: 179 LCYLWVPLTTTTT--TTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVPLNGTTT 236
Query: 296 TVPKADLTSSLPLS 337
TVP + T++ PL+
Sbjct: 237 TVPTNETTTTSPLN 250
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 38.7 bits (86), Expect = 0.006
Identities = 31/88 (35%), Positives = 33/88 (37%), Gaps = 3/88 (3%)
Frame = +1
Query: 553 PGXGFPPXGGLXGPXXXKXXXGGFGPPPXXKGXXKXXSFXGKXXGXPPXFXPPPXXXXPK 732
PG PP P GG+GPPP G S+ G G P F PPP P
Sbjct: 387 PGAFAPPPSAFGAPQGP-GGPGGYGPPPPG-GPGAPGSY-GPPQGGPGGFGPPP-PGGPG 442
Query: 733 XXXTPPLXFSFXXXPXXG--GRXGG-PF 807
PP F P G G GG PF
Sbjct: 443 AYGPPPTGFPPVGAPPPGAAGAPGGNPF 470
Score = 35.9 bits (79), Expect = 0.039
Identities = 28/87 (32%), Positives = 28/87 (32%), Gaps = 4/87 (4%)
Frame = +1
Query: 556 GXGFPPXGGLXGPXXXKXXXGGFG-PPPXXKGXXKXXSFXGKXX---GXPPXFXPPPXXX 723
G G PP G P G FG PPP SF G P F PPP
Sbjct: 330 GFGAPPQG----PPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSG 385
Query: 724 XPKXXXTPPLXFSFXXXPXXGGRXGGP 804
P PP F P G G P
Sbjct: 386 PPGAFAPPPSAFGAPQGPGGPGGYGPP 412
Score = 28.7 bits (61), Expect = 5.9
Identities = 23/84 (27%), Positives = 25/84 (29%)
Frame = +1
Query: 556 GXGFPPXGGLXGPXXXKXXXGGFGPPPXXKGXXKXXSFXGKXXGXPPXFXPPPXXXXPKX 735
G G PP GG P G +GPP G G PP PP P
Sbjct: 408 GYGPPPPGGPGAP-------GSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPG 460
Query: 736 XXTPPLXFSFXXXPXXGGRXGGPF 807
P F P G P+
Sbjct: 461 AAGAPGGNPFARGPSATGYRQSPY 484
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/50 (42%), Positives = 24/50 (48%)
Frame = +2
Query: 173 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 322
TPT ET T TT T+ TTT ET T +TT T T P T+
Sbjct: 111 TPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTT 160
Score = 32.7 bits (71), Expect = 0.36
Identities = 22/61 (36%), Positives = 25/61 (40%)
Frame = +2
Query: 143 TLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 322
T TP TPT T T T T+ P TTT T T +TT T T P T
Sbjct: 91 TTTTPTTTTTTPTTTTETTTTPTTETTTT-PTTTTPTTTTTTPTTTTTETTTTPTTTTTE 149
Query: 323 S 325
+
Sbjct: 150 T 150
Score = 32.3 bits (70), Expect = 0.48
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = +2
Query: 143 TLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLT 319
T TP TPT T T TT T+ +TTT T T +TT T T + T
Sbjct: 84 TTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTT 142
Score = 32.3 bits (70), Expect = 0.48
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +2
Query: 173 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLP 331
TPT T T TT T+ P TTT T T +TT T T T++ P
Sbjct: 124 TPTTTTTTPTTTTTETT-TTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTP 175
Score = 31.9 bits (69), Expect = 0.64
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 173 TPTQETATNLLTTARTSLILPKTTTLMETATNLS-TTVHITWTVPKADLTSS 325
T T T T TT T+ P TTT T T + TT T T P + T++
Sbjct: 68 TTTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTT 119
Score = 31.9 bits (69), Expect = 0.64
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 173 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHI-TWTVPKADLTSSLPLS 337
T T T T TT T+ +P TTT T T +TT T T P T + S
Sbjct: 197 TTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTS 252
Score = 31.9 bits (69), Expect = 0.64
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = +2
Query: 143 TLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 304
T TP PT T T TT T+ TTT T T +TT T T P
Sbjct: 206 TTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTP 259
Score = 31.5 bits (68), Expect = 0.84
Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Frame = +2
Query: 143 TLKTPLG*WKTPTQETA--TNLLTTARTSLILPKTTTLM-ETATNLSTTVHITWTVPKAD 313
T TP TPT T T TT T+ P TTT + T T TT T T P
Sbjct: 178 TTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTT 237
Query: 314 LTS 322
T+
Sbjct: 238 TTT 240
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = +2
Query: 173 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 322
T T T T TT T+ P TTT T TT T T P T+
Sbjct: 82 TTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTT 131
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +2
Query: 143 TLKTPLG*WKTPTQETATNLLTTARTSLILP----KTTTLMETATNLSTTVHITWTVPKA 310
T TP TPT T T TT+ T+ P +TTT T T TT T T P
Sbjct: 230 TTTTPTTTTTTPTT-TTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTT 288
Query: 311 DLTSS 325
T++
Sbjct: 289 TTTTA 293
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/63 (34%), Positives = 26/63 (41%)
Frame = +2
Query: 143 TLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 322
T TP +T T+ T TT T P TTT T T + T T T K T+
Sbjct: 255 TTTTPTTTTQTTTKPT-----TTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTKTT 309
Query: 323 SLP 331
S P
Sbjct: 310 STP 312
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = +2
Query: 173 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 322
TPT T T TT T+ TTT T T +TT T T P T+
Sbjct: 119 TPTTTTPTTTTTTPTTTTT-ETTTTPTTTTTETTTTPTTTTTTPTTTTTT 167
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = +2
Query: 143 TLKTPLG*WKTPTQETATNLLTTARTSLILPKTTT-LMETATNLSTTVHITWTVPKADLT 319
T TP TPT T T TT + TTT ET T +TT T T T
Sbjct: 77 TPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTT 136
Query: 320 S 322
+
Sbjct: 137 T 137
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +2
Query: 143 TLKTPLG*WKTPTQETAT-NLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLT 319
T TP TPT T T TTA T+ TTT T T +T T T P T
Sbjct: 171 TTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTT-TTTPTTTTTVPTTTTTTPTTTTT 229
Query: 320 SS 325
++
Sbjct: 230 TT 231
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 35.9 bits (79), Expect = 0.039
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +3
Query: 747 PPXVFFFXXPXPXGXXWGXXXSRXXXNPPPPPGXKXXXXXSXPXPPPPP 893
PP V P P + PPPPP + P PPPPP
Sbjct: 535 PPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPP 583
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 827 PPPPPRXKXXFXXFXPPSPAPPP 895
PPPPP PP P PPP
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPPP 584
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 34.7 bits (76), Expect = 0.090
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP K S P PPPPP
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPP 144
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +3
Query: 708 PPXQXXXKXXXXTPPXVFFFXXPXPXGXXWGXXXSRXXXNPPPPPGXKXXXXXSXPXPPP 887
PP PP P P G G PPPPPG P PPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPG---GLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Query: 888 PP 893
PP
Sbjct: 764 PP 765
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP P PPPPP
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/70 (32%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +2
Query: 686 GGPRXFXPP--LXXXXQKXXXHPPXGFLFXXPXXXGXGVGXXFXPXXXKPPPPPRXKXXF 859
GGP PP L PP G L P G P PPPPP F
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGL---PPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 860 XXFXPPSPAP 889
PP P P
Sbjct: 781 KGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +3
Query: 708 PPXQXXXKXXXXTPPXVFFFXXPXPXGXXWGXXXSRXXXNPPPPPGXKXXXXXSXPXPPP 887
PP PP P P G G PPPPPG P PPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPG---GLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Query: 888 PP 893
PP
Sbjct: 764 PP 765
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP P PPPPP
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/70 (32%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +2
Query: 686 GGPRXFXPP--LXXXXQKXXXHPPXGFLFXXPXXXGXGVGXXFXPXXXKPPPPPRXKXXF 859
GGP PP L PP G L P G P PPPPP F
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGL---PPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 860 XXFXPPSPAP 889
PP P P
Sbjct: 781 KGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +3
Query: 708 PPXQXXXKXXXXTPPXVFFFXXPXPXGXXWGXXXSRXXXNPPPPPGXKXXXXXSXPXPPP 887
PP PP P P G G PPPPPG P PPP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPG---GLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
Query: 888 PP 893
PP
Sbjct: 347 PP 348
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP P PPPPP
Sbjct: 352 PPPPPPPPPGGFKGGPPPPPPP 373
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/70 (32%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +2
Query: 686 GGPRXFXPP--LXXXXQKXXXHPPXGFLFXXPXXXGXGVGXXFXPXXXKPPPPPRXKXXF 859
GGP PP L PP G L P G P PPPPP F
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGL---PPISGGPPPPPPPPGGCPPPPPPPPPGGF 363
Query: 860 XXFXPPSPAP 889
PP P P
Sbjct: 364 KGGPPPPPPP 373
>Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 163 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDRP 303
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 163 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDRP 303
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical
protein Y81G3A.1 protein.
Length = 243
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 163 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDRP 303
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +2
Query: 173 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 304
TPT T+T TT T TTT T T +T T T+P
Sbjct: 86 TPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMP 129
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +2
Query: 179 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 304
T T T TT+ T+ P TTT T STT T T P
Sbjct: 61 TTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 32.3 bits (70), Expect = 0.48
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP S P PPPPP
Sbjct: 156 PPPPPPPPVSVPSSKPTPPPPP 177
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 32.3 bits (70), Expect = 0.48
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP S P PPPPP
Sbjct: 156 PPPPPPPPVSVPSSKPTPPPPP 177
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 31.9 bits (69), Expect = 0.64
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 173 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS-SLPLSLV 343
T T T T TT T+ P TTT T T +TT T T P T+ S PL+ V
Sbjct: 89 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTT--TTTPTTTTTTPTTTTTTRSTPLTEV 144
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 31.9 bits (69), Expect = 0.64
Identities = 24/63 (38%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +2
Query: 143 TLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNL--STTVHITWTVPKADL 316
T TP TPT T T TT T+ P TTT T T +TT T T P
Sbjct: 265 TTTTPTTTTTTPTTTTTTP-TTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTTT 323
Query: 317 TSS 325
T+S
Sbjct: 324 TAS 326
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 152 TPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNL-STTVHITWTVPKADLTSS 325
TP TPT T T TT TS P TTT T T STT T T+ T++
Sbjct: 286 TPTTTTTTPTT-TTTESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTT 343
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 31.9 bits (69), Expect = 0.64
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 167 WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 328
W P ET TT T+ +P TTT+ T T +T T T A T+++
Sbjct: 298 WPLPA-ETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 31.9 bits (69), Expect = 0.64
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 167 WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 328
W P ET TT T+ +P TTT+ T T +T T T A T+++
Sbjct: 298 WPLPA-ETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 31.9 bits (69), Expect = 0.64
Identities = 23/66 (34%), Positives = 25/66 (37%)
Frame = +1
Query: 616 GGFGPPPXXKGXXKXXSFXGKXXGXPPXFXPPPXXXXPKXXXTPPLXFSFXXXPXXGGRX 795
G F PPP F G+ G PP F PPP P PP F P
Sbjct: 294 GFFPPPPRGHFPPPPPHFMGR--GMPPPFMPPP----PHFGMGPPR--GFMPPPHPMMFR 345
Query: 796 GGPFXP 813
GGP+ P
Sbjct: 346 GGPYPP 351
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 31.9 bits (69), Expect = 0.64
Identities = 23/66 (34%), Positives = 25/66 (37%)
Frame = +1
Query: 616 GGFGPPPXXKGXXKXXSFXGKXXGXPPXFXPPPXXXXPKXXXTPPLXFSFXXXPXXGGRX 795
G F PPP F G+ G PP F PPP P PP F P
Sbjct: 294 GFFPPPPRGHFPPPPPHFMGR--GMPPPFMPPP----PHFGMGPPR--GFMPPPHPMMFR 345
Query: 796 GGPFXP 813
GGP+ P
Sbjct: 346 GGPYPP 351
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 31.5 bits (68), Expect = 0.84
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP S P PPPPP
Sbjct: 490 PPPPPLPPIATPSSVPPPPPPP 511
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 825 NPPPPPGXKXXXXXSXPXPPPPP 893
+PPPPP S PPPPP
Sbjct: 488 SPPPPPPLPPIATPSSVPPPPPP 510
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 31.5 bits (68), Expect = 0.84
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 140 PTLKTPLG*WKTPTQETA--TNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKAD 313
PT L T T+ TA T + T ART+ P TTT + + T L TT+ + + D
Sbjct: 368 PTTSLALETTTTATRTTAKITAVATVARTNTTQPPTTTPLSSTTALPTTLTSSSSTESTD 427
Query: 314 LTSS 325
+S+
Sbjct: 428 GSST 431
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.5 bits (68), Expect = 0.84
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP S P PPPPP
Sbjct: 497 PPPPPLPPIATPSSVPPPPPPP 518
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 825 NPPPPPGXKXXXXXSXPXPPPPP 893
+PPPPP S PPPPP
Sbjct: 495 SPPPPPPLPPIATPSSVPPPPPP 517
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP + P PPPPP
Sbjct: 794 PPPPPPLPPISSGAPPPPPPPP 815
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP P PPPPP
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP + P PPPPP
Sbjct: 794 PPPPPPLPPISSGAPPPPPPPP 815
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP P PPPPP
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPP 816
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 170 KTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 325
KT Q T T + TT RTS +P TTT + + T P D T +
Sbjct: 288 KTNPQITTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFSTTTRQPNFDKTKT 339
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +2
Query: 170 KTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 337
K ++ N+ TT I TTT M T T ST + T T P+ ++P S
Sbjct: 274 KPEKKKEVFNVFTTKTNPQI---TTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFS 326
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/61 (32%), Positives = 21/61 (34%)
Frame = +1
Query: 568 PPXGGLXGPXXXKXXXGGFGPPPXXKGXXKXXSFXGKXXGXPPXFXPPPXXXXPKXXXTP 747
PP GGL P G GPPP +G G PP PP P P
Sbjct: 1554 PPMGGLPPPHGGMNGWRG-GPPP-PRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPP 1611
Query: 748 P 750
P
Sbjct: 1612 P 1612
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP P PPPPP
Sbjct: 1341 PPPPPPPPSDDLTPVPPPPPPP 1362
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP P PPPPP
Sbjct: 1342 PPPPPPPSDDLTPVPPPPPPPP 1363
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP P PPPPP
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPPP 1360
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPP K P PPPPP
Sbjct: 1360 PPPPTMSKAPTGVPLPVPPPPP 1381
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 825 NPPPPPGXKXXXXXSXPXPPPPP 893
NPPPPP S PPPPP
Sbjct: 502 NPPPPPPLLGIAPMSTNAPPPPP 524
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP P PPPPP
Sbjct: 39 PPPPPPPPCGGGYEAPPPPPPP 60
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Frame = +3
Query: 774 PXPXGXXWGXXXSRXXXNPPPPP--GXKXXXXXSXPXPPPPP 893
P P S PPPPP G + P PPPPP
Sbjct: 615 PPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPP 656
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Frame = +3
Query: 774 PXPXGXXWGXXXSRXXXNPPPPPGXKXXXXXSXPX----PPPPP 893
P P +G +R PPPPP P PPPPP
Sbjct: 591 PLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPP 634
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Frame = +3
Query: 774 PXPXGXXWGXXXSRXXXNPPPPP--GXKXXXXXSXPXPPPPP 893
P P S PPPPP G + P PPPPP
Sbjct: 441 PPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPP 482
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Frame = +3
Query: 774 PXPXGXXWGXXXSRXXXNPPPPPGXKXXXXXSXPX----PPPPP 893
P P +G +R PPPPP P PPPPP
Sbjct: 417 PLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPP 460
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -2
Query: 891 GGAGXGGXXXXNXXFXRGGGGGXXXXGXKXXPTPXPXXXGXXKRKPKGGC 742
GG G GG GG GG G P P P G GGC
Sbjct: 23 GGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGC 72
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Frame = -2
Query: 894 GGGAGXGGXXXXNXXFXRGGG---GGXXXXGXKXXPTPXPXXXGXXKRKPKGGC 742
GGG G GG GGG GG G P P P G GGC
Sbjct: 76 GGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGC 129
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +2
Query: 173 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 304
T T T T +T T+ P TTT E L+T TWT P
Sbjct: 627 TSTSTTTTTTTSTTATTTPQPTTTTTSEKPVTLTTQ---TWTAP 667
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +2
Query: 173 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 304
T T T T +T T+ P TTT E L+T TWT P
Sbjct: 627 TSTSTTTTTTTSTTATTTPQPTTTTTSEKPVTLTTQ---TWTAP 667
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/68 (30%), Positives = 28/68 (41%)
Frame = +2
Query: 173 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLAV 352
TP T T TT + + TTT T T TT T T P TS+ + +A
Sbjct: 416 TPLPTTTTTTTTTPKPTTTTTTTTTPAPTTTQKPTT---TTTTPAPTTTSTTSIPTTIAT 472
Query: 353 GSKEYLRK 376
+ L+K
Sbjct: 473 TTAAPLKK 480
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 774 PXPXGXXWGXXXSRXXXNPPPPPGXKXXXXXSXPXPPPPP 893
P P G PPPPP P PPPPP
Sbjct: 216 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 255
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 827 PPPPPRXKXXFXXFXPPSPAPPP 895
PPPPP PP P PPP
Sbjct: 234 PPPPPLPPVGAGAPPPPPPPPPP 256
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP P PPPPP
Sbjct: 69 PPPPPPPLISILQQAPPPPPPP 90
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP + P PPPPP
Sbjct: 70 PPPPPPLISILQQAPPPPPPPP 91
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP P PPPPP
Sbjct: 71 PPPPPLISILQQAPPPPPPPPP 92
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 774 PXPXGXXWGXXXSRXXXNPPPPPGXKXXXXXSXPXPPPPP 893
P P G PPPPP P PPPPP
Sbjct: 202 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 827 PPPPPRXKXXFXXFXPPSPAPPP 895
PPPPP PP P PPP
Sbjct: 220 PPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 774 PXPXGXXWGXXXSRXXXNPPPPPGXKXXXXXSXPXPPPPP 893
P P G PPPPP P PPPPP
Sbjct: 202 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 827 PPPPPRXKXXFXXFXPPSPAPPP 895
PPPPP PP P PPP
Sbjct: 220 PPPPPLPPVGAGAPPPPPPPPPP 242
>Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical
protein F31B9.4 protein.
Length = 181
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +2
Query: 173 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 304
T T A N+ TT T+ I P T T T +TTV T T P
Sbjct: 30 TTTTSPAPNITTTTTTTTIAPPTNTTTTILTT-TTTVTTTTTSP 72
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPPG PPPPP
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPP 321
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP + P PPPP
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPP 320
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPPG PPPPP
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPP 331
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPP + P PPPP
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPP 330
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 894 GGGAGXGGXXXXNXXFXRGGGGGXXXXG 811
GGG G GG N F GGGG G
Sbjct: 58 GGGGGGGGFGGGNGGFGGGGGGNYGGGG 85
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 894 GGGAGXGGXXXXNXXFXRGGGGGXXXXG 811
GGG G GG N F GGGG G
Sbjct: 58 GGGGGGGGFGGGNGGFGGGGGGSGGGGG 85
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 674 PXKXXFFXXPFXXGGGPXPPXXFFXXXGPXNPPXGGNPXP 555
P F P GG P PP F P P GG P P
Sbjct: 68 PVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPP 107
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/71 (30%), Positives = 23/71 (32%), Gaps = 4/71 (5%)
Frame = +3
Query: 693 PAFXXPPXQXXXKXXXXTPPXV---FFFXXPXPXGXXWGXXXSRXXXNPPPPP-GXKXXX 860
P+ PP Q K PP V F P P G PPPP G
Sbjct: 48 PSGILPPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPP 107
Query: 861 XXSXPXPPPPP 893
PPPPP
Sbjct: 108 PPMFGAPPPPP 118
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +2
Query: 176 PTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLAVG 355
P +ET T+L T PKTTT++ ++T ST +T +A T++ P + V
Sbjct: 440 PHKETTTSLATEQ------PKTTTIVASSTETST---VTTDATEATTTTTAPTTTVATTT 490
Query: 356 SKE 364
+K+
Sbjct: 491 TKK 493
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = +2
Query: 173 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 337
T T+E T T+ P TTT T T T T P T+ PL+
Sbjct: 325 TTTEEATTTTEEITTTTTKAPTTTTTQSTTTTTQLPTTTTTTEPTTTTTTVDPLA 379
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +2
Query: 806 FXPXXXKPPPPPRXKXXFXXFXPPSPAPPP 895
F P +PPPPP PP P P P
Sbjct: 199 FQPMFSQPPPPPLPPNSQFMTPPPRPPPAP 228
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Frame = -2
Query: 894 GGGAGXGGXXXXNXXFXRGGGGGXXXXGXK----XXPTPXPXXXGXXKRK 757
GGG G GG GGGGG G P P P G ++K
Sbjct: 32 GGGGGCGGGGGCGGGCGYGGGGGCGYGGGYGCGIPPPPPPPPQCGCGRKK 81
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = -2
Query: 894 GGGAGXGGXXXXNXXFXRGGGGGXXXXGXKXXPTPXPXXXGXXKRKP 754
GGG G GG GGG G G P P P G +R+P
Sbjct: 190 GGGGGMGG----------GGGSGGSGGGSGRFPPPPPPYGGGGRRRP 226
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 824 KPPPPPRXKXXFXXFXPPSPAPPP 895
+P PP F F PP P PPP
Sbjct: 424 RPFPPHHGHHHFPPFWPPCPPPPP 447
>AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying
defective protein 4,isoform a protein.
Length = 780
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 892 GGGGGXGXEXXKXXFXPGGGGG 827
GGGGG G PGGGGG
Sbjct: 11 GGGGGGGASGGAGGGAPGGGGG 32
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 828 PPPPPGXKXXXXXSXPXPPPPP 893
PPPPPG + P PPPPP
Sbjct: 2278 PPPPPG----YMHTPPLPPPPP 2295
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = +3
Query: 825 NPPPPP--GXKXXXXXSXPXPPPPP 893
+PPPPP G P PPPPP
Sbjct: 279 SPPPPPAGGSPPPPRAGSPPPPPPP 303
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 827 PPPPPRXKXXFXXFXPPSPAPP 892
PPPPPR K PP+ +PP
Sbjct: 329 PPPPPRQKRQAPERSPPTGSPP 350
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +3
Query: 774 PXPXGXXWGXXXSRXXXNPPPPPGXKXXXXXSXPXPPPPP 893
P P G +PPPPP PPPPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 276
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = +3
Query: 825 NPPPPP--GXKXXXXXSXPXPPPPP 893
+PPPPP G P PPPPP
Sbjct: 300 SPPPPPAGGSPPPPRAGSPPPPPPP 324
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 827 PPPPPRXKXXFXXFXPPSPAPP 892
PPPPPR K PP+ +PP
Sbjct: 350 PPPPPRQKRQAPERSPPTGSPP 371
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +3
Query: 774 PXPXGXXWGXXXSRXXXNPPPPPGXKXXXXXSXPXPPPPP 893
P P G +PPPPP PPPPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 297
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = +3
Query: 825 NPPPPP--GXKXXXXXSXPXPPPPP 893
+PPPPP G P PPPPP
Sbjct: 285 SPPPPPAGGSPPPPRAGSPPPPPPP 309
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 827 PPPPPRXKXXFXXFXPPSPAPP 892
PPPPPR K PP+ +PP
Sbjct: 335 PPPPPRQKRQAPERSPPTGSPP 356
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +3
Query: 774 PXPXGXXWGXXXSRXXXNPPPPPGXKXXXXXSXPXPPPPP 893
P P G +PPPPP PPPPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 282
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +2
Query: 755 GFLFXXPXXXGXGVGXXFXPXXXKPPPPPRXKXXFXXFXPPSPAPP 892
GFLF G G G PPPPP PP P PP
Sbjct: 17 GFLFPMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPP--PPPPPPP 60
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 894 GGGAGXGGXXXXNXXFXRGGGGG 826
GGG G GG + RGGGGG
Sbjct: 768 GGGGGGGGYRGNSYDDRRGGGGG 790
>Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +2
Query: 179 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 337
T T T +T T+L TTT T T + +I T+P T S L+
Sbjct: 213 TTTTTTTTITPKHTNLTTTATTTKKVTTTERAHLENILLTIPLKSTTQSPALT 265
>Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +2
Query: 179 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 337
T T T +T T+L TTT T T + +I T+P T S L+
Sbjct: 213 TTTTTTTTITPKHTNLTTTATTTKKVTTTERAHLENILLTIPLKSTTQSPALT 265
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 128 CWLWPTLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT 298
C L P P TPT T T + +T ++ TT+++ T T STT T T
Sbjct: 251 CGLVPETTKPTT--TTPTTTTTTTIPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTST 305
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +2
Query: 173 TPTQETATNLLTT----ARTSLILPKTTTLMETATNLSTTVHITWTVP-KADLTSSLP 331
T T +T+T + TT T+ PK TT ETAT S+T +T P T++LP
Sbjct: 497 TTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 553
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +2
Query: 173 TPTQETATNLLTT----ARTSLILPKTTTLMETATNLSTTVHITWTVP-KADLTSSLP 331
T T +T+T + TT T+ PK TT ETAT S+T +T P T++LP
Sbjct: 338 TTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 394
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 179 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 322
T T T + +T+ T TTTL + + STT T TV + TS
Sbjct: 409 TSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTS 456
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 179 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 322
T T T + +T+ T TTTL + + STT T TV + TS
Sbjct: 409 TSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTS 456
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +2
Query: 173 TPTQETATNLLTT----ARTSLILPKTTTLMETATNLSTTVHITWTVP-KADLTSSLP 331
T T +T+T + TT T+ PK TT ETAT S+T +T P T++LP
Sbjct: 378 TTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 434
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +2
Query: 179 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLAVGS 358
TQET T+ T+ TTT T +T T T P T++ P + V S
Sbjct: 200 TQETTTSTTAQPTTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNS 259
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +2
Query: 179 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLAVGS 358
TQET T+ T+ TTT T +T T T P T++ P + V S
Sbjct: 196 TQETTTSTTAQPTTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNS 255
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +2
Query: 179 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLAVGS 358
TQET T+ T+ TTT T +T T T P T++ P + V S
Sbjct: 139 TQETTTSTTAQPTTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNS 198
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.3 bits (60), Expect = 7.8
Identities = 29/92 (31%), Positives = 30/92 (32%), Gaps = 8/92 (8%)
Frame = +1
Query: 562 GFPPXGGLXGPXXXKXXXGGFGPPP--XXKGXXKXXSFXG--KXXGXPPXFXPP----PX 717
G PP GG GP GPP G G G PP PP P
Sbjct: 369 GAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPS 428
Query: 718 XXXPKXXXTPPLXFSFXXXPXXGGRXGGPFXP 813
P PP F+ P GG GPF P
Sbjct: 429 GAPPSGG--PPGPFNPSGAPPSGG-PPGPFNP 457
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +2
Query: 176 PTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 325
PT T + TT TS T+T T T ST+ H T + TSS
Sbjct: 274 PTTTVVTTVPTTTATST---STSTASTTTTTPSTSTHTTTVTYSTNATSS 320
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +2
Query: 176 PTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 325
PT T + TT TS T+T T T ST+ H T + TSS
Sbjct: 256 PTTTVVTTVPTTTATST---STSTASTTTTTPSTSTHTTTVTYSTNATSS 302
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 173 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 325
T T T T TT T+ +TTT + T+T+ +T T T P T++
Sbjct: 269 TTTSTTTTEPTTTTSTTT---QTTTTVPTSTSTISTTSTTTTTPTTTTTTT 316
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 894 GGGAGXGGXXXXNXXFXRGGGGG 826
GGG G GG + GGGGG
Sbjct: 362 GGGGGGGGGAAAGGGYNAGGGGG 384
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,842,659
Number of Sequences: 27780
Number of extensions: 446952
Number of successful extensions: 3346
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2560
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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