Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_G17
         (842 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0219 + 21007875-21008253,21009774-21009811,21009948-210099...    29   3.5  

>02_04_0219 +
           21007875-21008253,21009774-21009811,21009948-21009976,
           21010398-21010443,21010567-21010681,21010790-21010857,
           21011780-21011974,21012180-21012281,21012889-21013119,
           21013514-21013684
          Length = 457

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 17/46 (36%), Positives = 28/46 (60%)
 Frame = -1

Query: 266 TVLRYLTKLFQCKLLYSQMSLLFEIEHSILPHTIFTFDTIRTKRRS 129
           TV+  + K+ +C+LL S M+ LFE+   +L ++IF  +  R   RS
Sbjct: 394 TVMLNVKKIAECRLLLSCMNELFELSVHLL-YSIFLAEAQRNFSRS 438


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,760,371
Number of Sequences: 37544
Number of extensions: 276534
Number of successful extensions: 429
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)