Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_G17
         (842 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF101318-7|AAC69345.1|  826|Caenorhabditis elegans Hypothetical ...    28   7.2  
AF039042-6|AAC48244.1|  219|Caenorhabditis elegans Glutathione s...    28   7.2  
Z81124-8|CAD56599.1|  426|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>AF101318-7|AAC69345.1|  826|Caenorhabditis elegans Hypothetical
           protein Y73C8C.3 protein.
          Length = 826

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 326 HYYNPVIQGYITHSSIRRYETVLRYLT 246
           H Y  ++QG I +S +RRYET +   T
Sbjct: 108 HDYFVILQGMIPYSPLRRYETEVAMAT 134


>AF039042-6|AAC48244.1|  219|Caenorhabditis elegans Glutathione
           s-transferase protein21 protein.
          Length = 219

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 329 DHYYNPVIQGYITHSSIRRYETVLRYLTKLFQCKLL 222
           DH Y+    G +TH    R ET+ ++  K+++  LL
Sbjct: 172 DHLYSLDTMGMLTHEDAWRCETLKKFQEKIYEHPLL 207


>Z81124-8|CAD56599.1|  426|Caenorhabditis elegans Hypothetical
           protein T21B4.14 protein.
          Length = 426

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
 Frame = -1

Query: 266 TVLRYLTKLFQCK--LLYSQMSLLFEIEHS---ILPHTIFTFDTIRTKRRSSSPV 117
           ++L + ++L  C   L++   + LFE+E+S      HT F F+T     +SSSP+
Sbjct: 30  SILVFDSRLDVCSKVLIFKLSNFLFELENSTRYFRNHTTFQFNTSHYFMQSSSPL 84


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,765,683
Number of Sequences: 27780
Number of extensions: 253105
Number of successful extensions: 391
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 391
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)