Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_G15
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.068
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.068
AF098986-1|AAC67425.1| 747|Caenorhabditis elegans T box family ... 32 0.48
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.64
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.64
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.64
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 1.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.1
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 31 1.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.1
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 31 1.5
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 1.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 1.9
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 30 2.6
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 30 2.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 30 2.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 3.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 3.4
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 3.4
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 29 4.5
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 29 4.5
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 29 4.5
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 4.5
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 29 4.5
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 29 4.5
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 29 4.5
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 29 4.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.5
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 5.9
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ... 29 5.9
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical... 29 5.9
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 7.8
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 28 7.8
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 7.8
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 7.8
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.1 bits (77), Expect = 0.068
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = +3
Query: 711 PGPPXXSIXPPXX--TPXXKTRXQXPXALXXXXPPVPGAPXVXXXXPPLKXXXPPPPP 878
P PP + PP TP R P + PP P P P + PPPPP
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/56 (32%), Positives = 21/56 (37%)
Frame = +3
Query: 711 PGPPXXSIXPPXXTPXXKTRXQXPXALXXXXPPVPGAPXVXXXXPPLKXXXPPPPP 878
P PP + PP P R P + PP P + PP PPPPP
Sbjct: 288 PPPPSSGMWPPPPPPPPG-RTPGPPGMPGMPPPPPPS----RFGPPGMGGMPPPPP 338
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +3
Query: 780 PXALXXXXPPVPGAPXV--XXXXPPLKXXXPPPPPXXP 887
P ++ PP+P P + PP PPPPP P
Sbjct: 267 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 304
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/83 (25%), Positives = 26/83 (31%), Gaps = 6/83 (7%)
Frame = +2
Query: 656 PPPNXNXPXKXXLXXXXNSXTPIXLXXATPXXPXXQNPXPXTXCPSXXXSPGSRXAGGXX 835
PPP+ + P + P P + P PG R GG
Sbjct: 289 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 348
Query: 836 GXPPPQXXXA------PPPPXXP 886
PPP+ A PPPP P
Sbjct: 349 PPPPPRYPSAGPGMYPPPPPSRP 371
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.1 bits (77), Expect = 0.068
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = +3
Query: 711 PGPPXXSIXPPXX--TPXXKTRXQXPXALXXXXPPVPGAPXVXXXXPPLKXXXPPPPP 878
P PP + PP TP R P + PP P P P + PPPPP
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/56 (32%), Positives = 21/56 (37%)
Frame = +3
Query: 711 PGPPXXSIXPPXXTPXXKTRXQXPXALXXXXPPVPGAPXVXXXXPPLKXXXPPPPP 878
P PP + PP P R P + PP P + PP PPPPP
Sbjct: 298 PPPPSSGMWPPPPPPPPG-RTPGPPGMPGMPPPPPPS----RFGPPGMGGMPPPPP 348
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +3
Query: 780 PXALXXXXPPVPGAPXV--XXXXPPLKXXXPPPPPXXP 887
P ++ PP+P P + PP PPPPP P
Sbjct: 277 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 314
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/83 (25%), Positives = 26/83 (31%), Gaps = 6/83 (7%)
Frame = +2
Query: 656 PPPNXNXPXKXXLXXXXNSXTPIXLXXATPXXPXXQNPXPXTXCPSXXXSPGSRXAGGXX 835
PPP+ + P + P P + P PG R GG
Sbjct: 299 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 358
Query: 836 GXPPPQXXXA------PPPPXXP 886
PPP+ A PPPP P
Sbjct: 359 PPPPPRYPSAGPGMYPPPPPSRP 381
>AF098986-1|AAC67425.1| 747|Caenorhabditis elegans T box family
protein 31 protein.
Length = 747
Score = 32.3 bits (70), Expect = 0.48
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -2
Query: 391 LNYILKLTSRLNNXSIYGVRFKDHFPMALAEPRTSIAGPALTMP 260
L ++L L+ L S Y + K HFP TS+ GPA+ +P
Sbjct: 610 LEHLLNLSHHLCRFSEYNLFVKAHFPRGSYGSLTSMTGPAVEIP 653
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.64
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 804 PPVPGAPXVXXXXPPLKXXXPPPPP 878
PP+ G P PP+ PPPPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPP 731
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = +2
Query: 743 PXXPXXQNPXPXTXCPSXXXSPGSRX--AGGXXGXPPPQXXXAPPPPXXP 886
P P P T P PG +GG PPP PPPP P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/57 (29%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +3
Query: 717 PPXXSIXPPXXTPXXKTRXQXPXALXXXXPPVPGA---PXVXXXXPPLKXXXPPPPP 878
PP PP T P PP+ G P PP+ PPPPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.64
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 804 PPVPGAPXVXXXXPPLKXXXPPPPP 878
PP+ G P PP+ PPPPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPP 731
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = +2
Query: 743 PXXPXXQNPXPXTXCPSXXXSPGSRX--AGGXXGXPPPQXXXAPPPPXXP 886
P P P T P PG +GG PPP PPPP P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/57 (29%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +3
Query: 717 PPXXSIXPPXXTPXXKTRXQXPXALXXXXPPVPGA---PXVXXXXPPLKXXXPPPPP 878
PP PP T P PP+ G P PP+ PPPPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.64
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 804 PPVPGAPXVXXXXPPLKXXXPPPPP 878
PP+ G P PP+ PPPPP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPP 314
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = +2
Query: 743 PXXPXXQNPXPXTXCPSXXXSPGSRX--AGGXXGXPPPQXXXAPPPPXXP 886
P P P T P PG +GG PPP PPPP P
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/57 (29%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +3
Query: 717 PPXXSIXPPXXTPXXKTRXQXPXALXXXXPPVPGA---PXVXXXXPPLKXXXPPPPP 878
PP PP T P PP+ G P PP+ PPPPP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/57 (33%), Positives = 21/57 (36%)
Frame = +3
Query: 708 IPGPPXXSIXPPXXTPXXKTRXQXPXALXXXXPPVPGAPXVXXXXPPLKXXXPPPPP 878
IP PP PP P P + PP P P + PP PPPPP
Sbjct: 764 IPPPPPPP-PPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPP---PPPPPPP 816
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/53 (28%), Positives = 17/53 (32%)
Frame = +3
Query: 729 SIXPPXXTPXXKTRXQXPXALXXXXPPVPGAPXVXXXXPPLKXXXPPPPPXXP 887
SI PP P + P P PP+ PPPPP P
Sbjct: 763 SIPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPP 815
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/57 (33%), Positives = 21/57 (36%)
Frame = +3
Query: 708 IPGPPXXSIXPPXXTPXXKTRXQXPXALXXXXPPVPGAPXVXXXXPPLKXXXPPPPP 878
IP PP PP P P + PP P P + PP PPPPP
Sbjct: 764 IPPPPPPP-PPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPP---PPPPPPP 816
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/53 (28%), Positives = 17/53 (32%)
Frame = +3
Query: 729 SIXPPXXTPXXKTRXQXPXALXXXXPPVPGAPXVXXXXPPLKXXXPPPPPXXP 887
SI PP P + P P PP+ PPPPP P
Sbjct: 763 SIPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPP 815
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = +3
Query: 729 SIXPPXXTPXXKTRXQXPXALXXXXPPVPGAPXVXXXXPPLKXXXPPPPPXXPXS 893
++ PP P ++ P + PP P P P + PPPPP P S
Sbjct: 607 AVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPM---GLPAVGAGAPPPPPPPPPS 658
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +3
Query: 738 PPXXTPXXKTRXQXPXALXXXXPPVPGAPXVXXXXPPLKXXXPPPPPXXP 887
P P T P A+ PP P P P+ PPPPP P
Sbjct: 591 PLPQAPNYGTPENRPHAVP---PPPPPPPPQSFGMAPISSAAPPPPPPPP 637
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = +3
Query: 729 SIXPPXXTPXXKTRXQXPXALXXXXPPVPGAPXVXXXXPPLKXXXPPPPPXXPXS 893
++ PP P ++ P + PP P P P + PPPPP P S
Sbjct: 433 AVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPM---GLPAVGAGAPPPPPPPPPS 484
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +3
Query: 738 PPXXTPXXKTRXQXPXALXXXXPPVPGAPXVXXXXPPLKXXXPPPPPXXP 887
P P T P A+ PP P P P+ PPPPP P
Sbjct: 417 PLPQAPNYGTPENRPHAVP---PPPPPPPPQSFGMAPISSAAPPPPPPPP 463
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = -2
Query: 886 GXXGGGGGXXXLRGGXXXXTXGAPGTGGXXX*RAXGXWXRVLXXGVXXGGXXEXNGG 716
G GGGGG GG G G+GG G L G GG GG
Sbjct: 55 GGGGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGG 111
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/56 (28%), Positives = 20/56 (35%)
Frame = +2
Query: 719 PIXLXXATPXXPXXQNPXPXTXCPSXXXSPGSRXAGGXXGXPPPQXXXAPPPPXXP 886
P+ + P P +P P GS G PPP +PPPP P
Sbjct: 248 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +2
Query: 740 TPXXPXXQNPXPXTXCPSXXXSPGSRXAGGXXGXPPPQXXXAPPPP 877
+P P +P P P GS G PPP +PPPP
Sbjct: 288 SPPPPRAGSPPPPPP-PRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/56 (28%), Positives = 20/56 (35%)
Frame = +2
Query: 719 PIXLXXATPXXPXXQNPXPXTXCPSXXXSPGSRXAGGXXGXPPPQXXXAPPPPXXP 886
P+ + P P +P P GS G PPP +PPPP P
Sbjct: 269 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +2
Query: 740 TPXXPXXQNPXPXTXCPSXXXSPGSRXAGGXXGXPPPQXXXAPPPP 877
+P P +P P P GS G PPP +PPPP
Sbjct: 309 SPPPPRAGSPPPPPP-PRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/56 (28%), Positives = 20/56 (35%)
Frame = +2
Query: 719 PIXLXXATPXXPXXQNPXPXTXCPSXXXSPGSRXAGGXXGXPPPQXXXAPPPPXXP 886
P+ + P P +P P GS G PPP +PPPP P
Sbjct: 254 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +2
Query: 740 TPXXPXXQNPXPXTXCPSXXXSPGSRXAGGXXGXPPPQXXXAPPPP 877
+P P +P P P GS G PPP +PPPP
Sbjct: 294 SPPPPRAGSPPPPPP-PRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/68 (33%), Positives = 26/68 (38%), Gaps = 6/68 (8%)
Frame = +3
Query: 702 GKIPGPPXXS--IXPPXXTPXXK---TRXQXPXALXXXXP-PVPGAPXVXXXXPPLKXXX 863
G +P PP S P +P +R P A P PVP AP PP
Sbjct: 1412 GAVPSPPPSSSRFSTPPVSPVSSCPSSRFSSPSATRPQSPDPVPAAPAENCDLPP----- 1466
Query: 864 PPPPPXXP 887
PPP P P
Sbjct: 1467 PPPEPPLP 1474
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +3
Query: 717 PPXXSIXPPXXTPXXKTRXQXPXALXXXXPPVPGAPXVXXXXPPLKXXXPPPP 875
PP PP P P PP P P PP PPPP
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +3
Query: 729 SIXPPXXTPXXKTRXQXPXALXXXXPPVPGAPXVXXXXPPLKXXXPPPPP 878
S+ PP P P PP P P PP+ PPPPP
Sbjct: 24 SMGPPPCPPPPPPMCAPPPL---PCPPPPICPPQFCPPPPMCPPPPPPPP 70
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/59 (30%), Positives = 21/59 (35%), Gaps = 5/59 (8%)
Frame = +3
Query: 717 PPXXSIXPPXXTPXXKTRXQXPXALXXXXPP-----VPGAPXVXXXXPPLKXXXPPPPP 878
PP SI PP + PP + GAP PP+ PPPPP
Sbjct: 536 PPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/61 (31%), Positives = 23/61 (37%)
Frame = -2
Query: 892 EXGXXGGGGGXXXLRGGXXXXTXGAPGTGGXXX*RAXGXWXRVLXXGVXXGGXXEXNGGP 713
+ G GGGGG +GG G G+ G + G W G GG GP
Sbjct: 190 QGGNQGGGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQGGWGN---QGGQQGGGRGGQQGP 246
Query: 712 G 710
G
Sbjct: 247 G 247
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1
Query: 824 RRXGNRGXXXXKGXWXLVXGFXGGGXXGWRNXAXWG 717
++ G RG G W G GGG GW + WG
Sbjct: 235 QQGGGRGGQQGPGGWG--GGGRGGGWGGWGRGSRWG 268
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/79 (29%), Positives = 28/79 (35%), Gaps = 1/79 (1%)
Frame = +2
Query: 653 GPPPNXNXPXKXXLXXXXNSXTPIXLXXATPXXPXXQNPXPXTXCPSXXXSPGSRXAGGX 832
GPPPN P N P + P N + P+ SP +G
Sbjct: 262 GPPPNI-PPSSIYSMPRANDLPPTEMAPTLPQISTSSNGASPSVSPAST-SP----SGPA 315
Query: 833 XGXPPPQXXX-APPPPXXP 886
PPP+ APPPP P
Sbjct: 316 PSIPPPRPPALAPPPPVAP 334
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/59 (30%), Positives = 21/59 (35%)
Frame = +3
Query: 711 PGPPXXSIXPPXXTPXXKTRXQXPXALXXXXPPVPGAPXVXXXXPPLKXXXPPPPPXXP 887
P P + PP P Q P + PP P P + P PPPPP P
Sbjct: 467 PTTPKPAPPPPSRIPNPSPSPQ-PAEVSKSPPPPPPLPPIAT--PSSVPPPPPPPPPPP 522
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/79 (29%), Positives = 28/79 (35%), Gaps = 1/79 (1%)
Frame = +2
Query: 653 GPPPNXNXPXKXXLXXXXNSXTPIXLXXATPXXPXXQNPXPXTXCPSXXXSPGSRXAGGX 832
GPPPN P N P + P N + P+ SP +G
Sbjct: 262 GPPPNI-PPSSIYSMPRANDLPPTEMAPTLPQISTSSNGASPSVSPAST-SP----SGPA 315
Query: 833 XGXPPPQXXX-APPPPXXP 886
PPP+ APPPP P
Sbjct: 316 PSIPPPRPPALAPPPPVAP 334
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/53 (28%), Positives = 18/53 (33%)
Frame = +3
Query: 720 PXXSIXPPXXTPXXKTRXQXPXALXXXXPPVPGAPXVXXXXPPLKXXXPPPPP 878
P I PP + + P PP PG + P PPPPP
Sbjct: 47 PPSGILPPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPP 99
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/56 (26%), Positives = 19/56 (33%)
Frame = +3
Query: 711 PGPPXXSIXPPXXTPXXKTRXQXPXALXXXXPPVPGAPXVXXXXPPLKXXXPPPPP 878
P PP PP +P + P + P P +P PPPPP
Sbjct: 141 PPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 804 PPVPGAPXVXXXXPPLKXXXPPPPP 878
PP+P P + PP K PPPPP
Sbjct: 73 PPLP-PPPLPLSNPPAKPTPPPPPP 96
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 804 PPVPGAPXVXXXXPPLKXXXPPPPP 878
PP+P P + PP K PPPPP
Sbjct: 295 PPLP-PPPLPLSNPPAKPTPPPPPP 318
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/62 (29%), Positives = 23/62 (37%)
Frame = +2
Query: 707 NSXTPIXLXXATPXXPXXQNPXPXTXCPSXXXSPGSRXAGGXXGXPPPQXXXAPPPPXXP 886
N+ +P P +P P PS P +R A G P APPPP P
Sbjct: 1054 NNKSPPQACLFNPFTQSAPSPAPP---PSTIPLPPTRGASVGPGPPAVPVRKAPPPPPRP 1110
Query: 887 XL 892
+
Sbjct: 1111 VI 1112
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/62 (29%), Positives = 23/62 (37%)
Frame = +2
Query: 707 NSXTPIXLXXATPXXPXXQNPXPXTXCPSXXXSPGSRXAGGXXGXPPPQXXXAPPPPXXP 886
N+ +P P +P P PS P +R A G P APPPP P
Sbjct: 1048 NNKSPPQACLFNPFTQSAPSPAPP---PSTIPLPPTRGASVGPGPPAVPVRKAPPPPPRP 1104
Query: 887 XL 892
+
Sbjct: 1105 VI 1106
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +3
Query: 738 PPXXTPXXKTRXQXPXALXXXXPPVPGAPXVXXXXPPLKXXXPPPPP 878
PP R P PVP P V P+ PPPPP
Sbjct: 1684 PPPVDNVRLIRPITPAQPPITQSPVPSEPVVVRTPSPVPQPTPPPPP 1730
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 813 PGAPXVXXXXPPLKXXXPPPPPXXP 887
P AP PP+ PPPPP P
Sbjct: 34 PAAPACAPPPPPMCGCAPPPPPPPP 58
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/62 (29%), Positives = 23/62 (37%)
Frame = +2
Query: 707 NSXTPIXLXXATPXXPXXQNPXPXTXCPSXXXSPGSRXAGGXXGXPPPQXXXAPPPPXXP 886
N+ +P P +P P PS P +R A G P APPPP P
Sbjct: 1054 NNKSPPQACLFNPFTQSAPSPAPP---PSTIPLPPTRGASVGPGPPAVPVRKAPPPPPRP 1110
Query: 887 XL 892
+
Sbjct: 1111 VI 1112
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/62 (29%), Positives = 23/62 (37%)
Frame = +2
Query: 707 NSXTPIXLXXATPXXPXXQNPXPXTXCPSXXXSPGSRXAGGXXGXPPPQXXXAPPPPXXP 886
N+ +P P +P P PS P +R A G P APPPP P
Sbjct: 1048 NNKSPPQACLFNPFTQSAPSPAPP---PSTIPLPPTRGASVGPGPPAVPVRKAPPPPPRP 1104
Query: 887 XL 892
+
Sbjct: 1105 VI 1106
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/62 (29%), Positives = 23/62 (37%)
Frame = +2
Query: 707 NSXTPIXLXXATPXXPXXQNPXPXTXCPSXXXSPGSRXAGGXXGXPPPQXXXAPPPPXXP 886
N+ +P P +P P PS P +R A G P APPPP P
Sbjct: 1048 NNKSPPQACLFNPFTQSAPSPAPP---PSTIPLPPTRGASVGPGPPAVPVRKAPPPPPRP 1104
Query: 887 XL 892
+
Sbjct: 1105 VI 1106
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/62 (29%), Positives = 23/62 (37%)
Frame = +2
Query: 707 NSXTPIXLXXATPXXPXXQNPXPXTXCPSXXXSPGSRXAGGXXGXPPPQXXXAPPPPXXP 886
N+ +P P +P P PS P +R A G P APPPP P
Sbjct: 1054 NNKSPPQACLFNPFTQSAPSPAPP---PSTIPLPPTRGASVGPGPPAVPVRKAPPPPPRP 1110
Query: 887 XL 892
+
Sbjct: 1111 VI 1112
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/61 (27%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Frame = +3
Query: 705 KIPGPPXXSIXPPXXTPXXKTRXQXPXAL--XXXXPPVPG-APXVXXXXPPLKXXXPPPP 875
++PG P + PP P P + PP PG P PP+ PP
Sbjct: 684 QLPGQPRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPP 743
Query: 876 P 878
P
Sbjct: 744 P 744
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = +3
Query: 720 PXXSIXPPXXTPXXKTRXQXPXALXXXXPPVPGAPXVXXXXPPLKXXXPPPPPXXP 887
P I PP P P A +P PP PPPPP P
Sbjct: 318 PTTFILPPPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPPPPPQTP 373
>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 182 EHDQCCSRAQVEDLQEN*KNGQEHP*RHRQSGPGDRGPR 298
E C S + L EN KN P RH+Q+G D+ +
Sbjct: 1052 ERTSCPSSKKRPKLAENEKNAASPPTRHQQNGSKDKNEK 1090
>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 182 EHDQCCSRAQVEDLQEN*KNGQEHP*RHRQSGPGDRGPR 298
E C S + L EN KN P RH+Q+G D+ +
Sbjct: 1052 ERTSCPSSKKRPKLAENEKNAASPPTRHQQNGSKDKNEK 1090
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/56 (30%), Positives = 20/56 (35%)
Frame = +3
Query: 711 PGPPXXSIXPPXXTPXXKTRXQXPXALXXXXPPVPGAPXVXXXXPPLKXXXPPPPP 878
P P + PP P Q P + PP P P + P PPPPP
Sbjct: 460 PTTPKPAPPPPSRIPNPSPSPQ-PAEVSKSPPPPPPLPPI---ATPSSVPPPPPPP 511
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = -1
Query: 767 GFXGGGXXGWRNXAXWGSXNFXXXXXXFFXGXWXWG 660
G+ G G GW N WG + + G W G
Sbjct: 692 GWGGNGGGGWGNNDPWGGSRWGGGRGGWGGGGWGGG 727
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 804 PPVPGAPXVXXXXPPLKXXXPPPPP 878
PP P P P L+ PPPPP
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPPPPP 794
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 804 PPVPGAPXVXXXXPPLKXXXPPPPP 878
PP P P P L+ PPPPP
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPPPPP 794
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,573,728
Number of Sequences: 27780
Number of extensions: 283148
Number of successful extensions: 1853
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1493
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -