Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_G14
(875 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 42 1e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.053
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.071
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.093
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.12
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.22
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 2.0
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 2.0
SPBC11C11.01 ||SPBC17D1.08|RNA-binding protein|Schizosaccharomyc... 26 8.1
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 26 8.1
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 41.9 bits (94), Expect = 1e-04
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +1
Query: 721 PXPPXXXPXXXPPPXXXXPPXPXXXXXXPPXPPXXPXXXXPXXPPPPXP 867
P P P P P PP P PP PP P PPPP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.9 bits (64), Expect = 0.50
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 754 PPPXXXXPPXPXXXXXXPPXPPXXPXXXXPXXPPPP 861
PPP P P P PP P P PPPP
Sbjct: 734 PPPPAVIVPTPAPAPI--PVPPPAPIMGGPPPPPPP 767
Score = 29.5 bits (63), Expect = 0.66
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 697 PXXGXXKXPXPPXXXPXXXPPPXXXXPPXPXXXXXXPPXPPXXP 828
P P PP PPP PP P PP PP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPP---PPPPPGVAGAGPPPPPPPP 782
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.1 bits (72), Expect = 0.053
Identities = 23/82 (28%), Positives = 24/82 (29%), Gaps = 2/82 (2%)
Frame = +1
Query: 628 PPLSXAXXGPPKXFXXXXXFFFPPXXGXXKXPXPPXXXPXXXPPPXXXXPPXPXXXXXXP 807
PP+ PP P G P P P P P PP P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV-PAPSSGIPPVPKPAAGVP 1189
Query: 808 PXPP--XXPXXXXPXXPPPPXP 867
P PP P P PP P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVP 1211
Score = 31.1 bits (67), Expect = 0.22
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +1
Query: 697 PXXGXXKXPXPPXXXPXXXPPPXXXXPPXPXXXXXXPPXPP--XXPXXXXPXXPPPPXP 867
P G P P P PP PP P PP PP P P PP P
Sbjct: 1174 PSSGIPPVPKPAAGVPPV--PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 28.7 bits (61), Expect = 1.1
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 5/52 (9%)
Frame = +1
Query: 727 PPXXXPXXXPP---PXXXXPPXPXXXXXXPPXPPXX--PXXXXPXXPPPPXP 867
PP P PP P PP P PP P P P PP P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVP 1134
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/58 (25%), Positives = 15/58 (25%)
Frame = +1
Query: 694 PPXXGXXKXPXPPXXXPXXXPPPXXXXPPXPXXXXXXPPXPPXXPXXXXPXXPPPPXP 867
P G P P P P P P P P P P PP P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +1
Query: 694 PPXXGXXKXPXPPXXXPXXXPPPXXXXPPXPXXXXXXPPXPPXXPXXXXPXXPPP 858
PP P P P PP PP P PP P P P P P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPV--PPPSTAPPVPTPSAGLPPVP--VPTAKAPPVPAP 1242
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/51 (29%), Positives = 15/51 (29%), Gaps = 2/51 (3%)
Frame = +1
Query: 721 PXPPXXXPXXXPPPXXXXPPXPXXXXXXPPXPPXX--PXXXXPXXPPPPXP 867
P PP P P PP P P P P P PP P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/57 (24%), Positives = 14/57 (24%)
Frame = +1
Query: 697 PXXGXXKXPXPPXXXPXXXPPPXXXXPPXPXXXXXXPPXPPXXPXXXXPXXPPPPXP 867
P P P P P P P P P P P PP P
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.071
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +1
Query: 730 PXXXPXXXPPPXXXXPPXPXXXXXXPPXPPXXP-XXXXPXXPPPPXP 867
P P PP P P PP P P P PPPP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.5 bits (63), Expect = 0.66
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +1
Query: 694 PPXXGXXKXPXPPXXXPXXXPPPXXXXPPXPXXXXXXPPXPPXXPXXXXPXXPPP 858
PP P PP P PPP PP P P PP P P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVP---PPPSA--PPMPAGPPSAP--PPPLPASSAPSVPNP 1746
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/38 (31%), Positives = 12/38 (31%)
Frame = +1
Query: 754 PPPXXXXPPXPXXXXXXPPXPPXXPXXXXPXXPPPPXP 867
PPP P P P PP P P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.3 bits (70), Expect = 0.093
Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 2/60 (3%)
Frame = +1
Query: 694 PPXXGXXKXPXPPXXXPXXXP--PPXXXXPPXPXXXXXXPPXPPXXPXXXXPXXPPPPXP 867
PP P P P P P PP P PP PP P P P P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 30.7 bits (66), Expect = 0.28
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 3/61 (4%)
Frame = +1
Query: 694 PPXXGXXKXPXPPXXXPXXXPPPXXXXPPXPXXXXXXPPXP---PXXPXXXXPXXPPPPX 864
PP P P P P PP P PP P P P PPP
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPA 479
Query: 865 P 867
P
Sbjct: 480 P 480
Score = 29.1 bits (62), Expect = 0.87
Identities = 26/94 (27%), Positives = 28/94 (29%), Gaps = 14/94 (14%)
Frame = +1
Query: 628 PPLSXAXX-----GPPKXFXXXXXFFFPPXXGXXKXPXPPXXXPXXXPP------PXXXX 774
PPLS + PP PP + PP P PP P
Sbjct: 377 PPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAP 436
Query: 775 PPXPXXXXXXPPXPPXXP-XXXXPXXPP--PPXP 867
P P PP PP P P P PP P
Sbjct: 437 PSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.9 bits (69), Expect = 0.12
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -1
Query: 875 GXXGXGGGGXXGXXXXGXXGGXGGXXXXXXGXGGXXXXGGGXXXGXXXGGXG 720
G G GGG G GG GG GG GGG G GG G
Sbjct: 189 GFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGG--PGGFEGGPG 238
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.22
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 805 PPXPPXXPXXXXPXXPPPPXP 867
PP PP P P PPPP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +1
Query: 784 PXXXXXXPPXPPXXPXXXXPXXPPPP 861
P PP PP P PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +1
Query: 694 PPXXGXXKXPXPPXXXPXXXPPPXXXXPPXPXXXXXXPPXPPXXPXXXXPXXPPPP 861
PP + PP P PP PP P PP P P P P P
Sbjct: 139 PPTSAPPRPSIPPPS-PASAPPIPSKAPPIPSSLP--PPAQPAAPVKSPPSAPSLP 191
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/56 (26%), Positives = 15/56 (26%)
Frame = +1
Query: 694 PPXXGXXKXPXPPXXXPXXXPPPXXXXPPXPXXXXXXPPXPPXXPXXXXPXXPPPP 861
PP P P P P P P P P P PPPP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/54 (25%), Positives = 14/54 (25%)
Frame = +1
Query: 694 PPXXGXXKXPXPPXXXPXXXPPPXXXXPPXPXXXXXXPPXPPXXPXXXXPXXPP 855
PP P P PP PP P P P P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/58 (24%), Positives = 15/58 (25%)
Frame = +1
Query: 694 PPXXGXXKXPXPPXXXPXXXPPPXXXXPPXPXXXXXXPPXPPXXPXXXXPXXPPPPXP 867
P + P P PP PP P P P P PP P
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Score = 26.6 bits (56), Expect = 4.6
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Frame = +1
Query: 721 PXPPXXXPXXXPP-PXXXXPPX-PXXXXXXPPXPPXXPXXXXPXXPPPPXP 867
P P PP P PP P PP P P P P P P
Sbjct: 154 PASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -1
Query: 875 GXXGXGGGGXXGXXXXGXXGGXGGXXXXXXGXGGXXXXGGGXXXGXXXGG 726
G G GGG G G G GG GG GG G GG
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG--RGGAKGG 70
>SPBC11C11.01 ||SPBC17D1.08|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 493
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -2
Query: 301 WTYF*QSSRHXRRLAIDAFIXSKQLINKMKNIANCRK 191
W Y H RL D ++ SK+L ++K C+K
Sbjct: 329 WRYRFSFEPHVERLLDDLYLFSKRLGGRIKEDIFCKK 365
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 25.8 bits (54), Expect = 8.1
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = -1
Query: 875 GXXGXGGGGXXGXXXXGXXGGXGGXXXXXXGXGGXXXXGGGXXXGXXXGGXGXXXXPXXG 696
G G GG G G GG GG GG GGG G G G G
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGN-----SRGGF---GGGSRGGFGGGSRGGSRGGFRG 184
Query: 695 GKK 687
G +
Sbjct: 185 GSR 187
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,396,298
Number of Sequences: 5004
Number of extensions: 37470
Number of successful extensions: 139
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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