Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_G12
(912 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1751 - 29215074-29216270 35 0.10
06_03_1326 - 29355467-29355817 31 0.96
07_03_0560 + 19479597-19480667 30 2.2
02_05_0157 - 26353971-26354336,26354645-26354726,26354838-263549... 30 2.2
07_03_1546 + 27602598-27602917,27602995-27603052,27603130-276032... 29 3.9
06_03_1506 + 30641428-30642168 29 3.9
02_03_0192 - 16204575-16204582,16204798-16204966,16205708-162057... 29 3.9
01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983 29 3.9
09_02_0369 - 8012470-8013120 29 6.8
03_02_0765 + 11000724-11002496 29 6.8
01_01_0570 - 4231100-4232560 29 6.8
11_07_0007 - 27262229-27262638,27263252-27263312 28 9.0
09_02_0274 + 6611555-6611615,6612229-6612638 28 9.0
02_02_0582 - 11798252-11798908 28 9.0
>07_03_1751 - 29215074-29216270
Length = 398
Score = 34.7 bits (76), Expect = 0.10
Identities = 19/44 (43%), Positives = 20/44 (45%)
Frame = -2
Query: 911 GGXRXGRAGCXGRXXAGAXLGXXGGXG*GVXSXGXHXGGGXXFG 780
GG G AG G GA G GG G G + G H GGG G
Sbjct: 202 GGGAGGGAGGGGGLGGGAGGGAGGGGGLGGGAGGGHGGGGGLGG 245
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = -1
Query: 912 GGGPXGAGXVXGAXGXGSRFGXXXGXXVRGXXXXXPXGGG 793
GGG G G + G G G+ G G G GGG
Sbjct: 270 GGGAGGGGGIGGGAGGGAGAGGGFGGGKGGGFGGGGGGGG 309
>06_03_1326 - 29355467-29355817
Length = 116
Score = 31.5 bits (68), Expect = 0.96
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -2
Query: 911 GGXRXGRAGCXGRXXAGAXLGXXGGXG*GVXSXGXHXGGG 792
GG + G G G+ G G GG G S G H GGG
Sbjct: 42 GGGKGGGEGGSGKYGGGYSGGHAGGGGGAGKSGGYHGGGG 81
>07_03_0560 + 19479597-19480667
Length = 356
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -1
Query: 912 GGGPXGAGXVXGAXGXGSRFGXXXGXXVRGXXXXXPXGGG 793
GGG G G + G G G FG G G GGG
Sbjct: 90 GGGAGGGGGLGGGGGKGGGFGGGVGGGGGGEGGGLGGGGG 129
>02_05_0157 -
26353971-26354336,26354645-26354726,26354838-26354933,
26355365-26356068
Length = 415
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = -2
Query: 908 GXRXGRAGCXGRXXAGAXLGXXGGXG*GVXSXGXHXGGGXXFGI 777
G G AG G AGA G GG G GV G GG G+
Sbjct: 98 GAGGGVAGGDGGGVAGAGGGCDGGDGGGVVGAGGGVAGGDGGGV 141
>07_03_1546 +
27602598-27602917,27602995-27603052,27603130-27603252,
27603896-27603992,27604095-27604131,27604244-27604349,
27604547-27604604,27604705-27604802,27604911-27605030,
27605622-27605667,27606336-27606522,27606747-27607263,
27607361-27607453,27608101-27608286,27608364-27608574,
27609263-27609387,27609518-27609664,27610114-27610236,
27610445-27610799,27611076-27611305,27611785-27611877
Length = 1109
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -2
Query: 434 KPMTLNPFDSFGSAANFSHTYSTWRFGFMKYPFSKSSTVLLPIWRDRT*TPGMFFS 267
+P+ P S GS+A +Y TW F + SS + +W R P FS
Sbjct: 159 EPVVFPPLKSVGSSAQAEISYLTWNPKFQHILATASSNGMTVVWDLRNQKPLTSFS 214
>06_03_1506 + 30641428-30642168
Length = 246
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -1
Query: 912 GGGPXGAGXVXGAXGXGSRFGXXXGXXVRGXXXXXPXGGG 793
GGGP G G G G G + G G GGG
Sbjct: 204 GGGPGGGGGGAGGGGGGGSYNGGTGGYGEGHGSGYGGGGG 243
>02_03_0192 -
16204575-16204582,16204798-16204966,16205708-16205785,
16206442-16206567,16206723-16206968,16207368-16207487,
16207947-16208198,16208441-16208517,16208581-16208680,
16210071-16210511
Length = 538
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 191 HPSSCGTAWVTHAACPLVLVPSKYS*RRTYL 283
HP CG A A CPL L+P + R +L
Sbjct: 5 HPPPCGVAPAAAATCPLFLLPRRSLSRSLHL 35
>01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983
Length = 448
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = -1
Query: 912 GGGPXGAGXVXGAXGXGSR-FGXXXGXXVRGXXXXXPXGGGXXF 784
GGG G + G+ G G R G G G P GGG F
Sbjct: 289 GGGGNTGGGIGGSTGGGGRGAGAGVGGITGGGDGGFPGGGGGGF 332
>09_02_0369 - 8012470-8013120
Length = 216
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 781 PKXXPPPXWXPXLXTPHPXPPXXP 852
P PPP + P + P P PP P
Sbjct: 69 PPLKPPPSFYPAVLPPEPPPPRRP 92
>03_02_0765 + 11000724-11002496
Length = 590
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -1
Query: 912 GGGPXGAGXVXGAXGXGSRFGXXXGXXVRGXXXXXPXGGG 793
GGG G G V G G G+ G G G GGG
Sbjct: 173 GGGAGGGGGVGGGLGGGAGGGLGSGAGGGGGLGGGAGGGG 212
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -1
Query: 912 GGGPXGAGXVXGAXGXGSRFGXXXGXXVRGXXXXXPXGGG 793
GGG G G G G G+ G G G GGG
Sbjct: 223 GGGAGGGGGAGGGLGGGAGGGGGLGGGAGGGLGGGAGGGG 262
>01_01_0570 - 4231100-4232560
Length = 486
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = -1
Query: 912 GGGPXGAGXVXGAXGXGSRFGXXXGXXVRGXXXXXPXGGG 793
GGG G G GA G GS G G +RG GGG
Sbjct: 116 GGGGGGVGGGVGA-GFGSGGGVGAGGGLRGGGGVGAGGGG 154
>11_07_0007 - 27262229-27262638,27263252-27263312
Length = 156
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -2
Query: 911 GGXRXGRAGCXGRXXAGAXLGXXG-GXG*GVXSXGXHXGGGXXFG 780
GG + G G G GA G G G G + G H GGG G
Sbjct: 71 GGGQSGGIGAPGGGCGGAGHGGGSAGGGRGGGAGGSHRGGGGGRG 115
>09_02_0274 + 6611555-6611615,6612229-6612638
Length = 156
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -2
Query: 911 GGXRXGRAGCXGRXXAGAXLGXXG-GXG*GVXSXGXHXGGGXXFG 780
GG + G G G GA G G G G + G H GGG G
Sbjct: 71 GGGQSGGIGAPGGGCGGAGHGGGSAGGGRGGGAGGSHRGGGGGRG 115
>02_02_0582 - 11798252-11798908
Length = 218
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -2
Query: 911 GGXRXGRAGCXGRXXAGAXLGXXGGXG*GVXSXGXHXGGGXXFGI 777
GG G G G +G GG G V G H GGG G+
Sbjct: 91 GGGAGGGVGIDV-GHGGVDVGIGGGGGAAVNGGGVHAGGGGGGGV 134
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,706,402
Number of Sequences: 37544
Number of extensions: 390866
Number of successful extensions: 1773
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1668
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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