Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_G12
(912 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U44772-1|AAB06236.1| 306|Homo sapiens palmitoyl protein thioest... 123 1e-27
L42809-1|AAA85337.1| 306|Homo sapiens palmitoyl-protein thioest... 123 1e-27
CR542053-1|CAG46850.1| 306|Homo sapiens PPT1 protein. 123 1e-27
BC008426-1|AAH08426.1| 306|Homo sapiens palmitoyl-protein thioe... 123 1e-27
AL512599-15|CAI11025.1| 306|Homo sapiens palmitoyl-protein thio... 123 1e-27
AF022211-1|AAB72224.1| 306|Homo sapiens palmitoyl-protein thioe... 123 1e-27
AL512599-16|CAI11026.1| 279|Homo sapiens palmitoyl-protein thio... 103 2e-23
AL512599-14|CAI11024.1| 177|Homo sapiens palmitoyl-protein thio... 33 1.1
>U44772-1|AAB06236.1| 306|Homo sapiens palmitoyl protein
thioesterase protein.
Length = 306
Score = 123 bits (296), Expect = 1e-27
Identities = 51/86 (59%), Positives = 64/86 (74%)
Frame = +1
Query: 187 PTPIVLWHGMGDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQ 366
P P+V+WHGMGD+CC S+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N Q
Sbjct: 32 PLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQ 91
Query: 367 VEYVCEKLAADPKLSNGFNVMGFSQG 444
V VC+ LA DPKL G+N MGFSQG
Sbjct: 92 VTTVCQALAKDPKLQQGYNAMGFSQG 117
Score = 33.5 bits (73), Expect = 1.1
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 440 RGCXFIRAVXQRCGHKLPQIKNMVSLGGQXQG 535
+G F+RAV QRC P + N++S+GGQ QG
Sbjct: 116 QGGQFLRAVAQRC--PSPPMINLISVGGQHQG 145
>L42809-1|AAA85337.1| 306|Homo sapiens palmitoyl-protein
thioesterase protein.
Length = 306
Score = 123 bits (296), Expect = 1e-27
Identities = 51/86 (59%), Positives = 64/86 (74%)
Frame = +1
Query: 187 PTPIVLWHGMGDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQ 366
P P+V+WHGMGD+CC S+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N Q
Sbjct: 32 PLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQ 91
Query: 367 VEYVCEKLAADPKLSNGFNVMGFSQG 444
V VC+ LA DPKL G+N MGFSQG
Sbjct: 92 VTTVCQALAKDPKLQQGYNAMGFSQG 117
Score = 33.5 bits (73), Expect = 1.1
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 440 RGCXFIRAVXQRCGHKLPQIKNMVSLGGQXQG 535
+G F+RAV QRC P + N++S+GGQ QG
Sbjct: 116 QGGQFLRAVAQRC--PSPPMINLISVGGQHQG 145
>CR542053-1|CAG46850.1| 306|Homo sapiens PPT1 protein.
Length = 306
Score = 123 bits (296), Expect = 1e-27
Identities = 51/86 (59%), Positives = 64/86 (74%)
Frame = +1
Query: 187 PTPIVLWHGMGDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQ 366
P P+V+WHGMGD+CC S+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N Q
Sbjct: 32 PLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQ 91
Query: 367 VEYVCEKLAADPKLSNGFNVMGFSQG 444
V VC+ LA DPKL G+N MGFSQG
Sbjct: 92 VTTVCQALAKDPKLQQGYNAMGFSQG 117
Score = 33.5 bits (73), Expect = 1.1
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 440 RGCXFIRAVXQRCGHKLPQIKNMVSLGGQXQG 535
+G F+RAV QRC P + N++S+GGQ QG
Sbjct: 116 QGGQFLRAVAQRC--PSPPMINLISVGGQHQG 145
>BC008426-1|AAH08426.1| 306|Homo sapiens palmitoyl-protein
thioesterase 1 (ceroid-lipofuscinosis, neuronal 1,
infantile) protein.
Length = 306
Score = 123 bits (296), Expect = 1e-27
Identities = 51/86 (59%), Positives = 64/86 (74%)
Frame = +1
Query: 187 PTPIVLWHGMGDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQ 366
P P+V+WHGMGD+CC S+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N Q
Sbjct: 32 PLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQ 91
Query: 367 VEYVCEKLAADPKLSNGFNVMGFSQG 444
V VC+ LA DPKL G+N MGFSQG
Sbjct: 92 VTTVCQALAKDPKLQQGYNAMGFSQG 117
Score = 33.5 bits (73), Expect = 1.1
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 440 RGCXFIRAVXQRCGHKLPQIKNMVSLGGQXQG 535
+G F+RAV QRC P + N++S+GGQ QG
Sbjct: 116 QGGQFLRAVAQRC--PSPPMINLISVGGQHQG 145
>AL512599-15|CAI11025.1| 306|Homo sapiens palmitoyl-protein
thioesterase 1 (ceroid-lipofuscinosis, neuronal 1,
infantile) protein.
Length = 306
Score = 123 bits (296), Expect = 1e-27
Identities = 51/86 (59%), Positives = 64/86 (74%)
Frame = +1
Query: 187 PTPIVLWHGMGDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQ 366
P P+V+WHGMGD+CC S+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N Q
Sbjct: 32 PLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQ 91
Query: 367 VEYVCEKLAADPKLSNGFNVMGFSQG 444
V VC+ LA DPKL G+N MGFSQG
Sbjct: 92 VTTVCQALAKDPKLQQGYNAMGFSQG 117
Score = 33.5 bits (73), Expect = 1.1
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 440 RGCXFIRAVXQRCGHKLPQIKNMVSLGGQXQG 535
+G F+RAV QRC P + N++S+GGQ QG
Sbjct: 116 QGGQFLRAVAQRC--PSPPMINLISVGGQHQG 145
>AF022211-1|AAB72224.1| 306|Homo sapiens palmitoyl-protein
thioesterase protein.
Length = 306
Score = 123 bits (296), Expect = 1e-27
Identities = 51/86 (59%), Positives = 64/86 (74%)
Frame = +1
Query: 187 PTPIVLWHGMGDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQ 366
P P+V+WHGMGD+CC S+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N Q
Sbjct: 32 PLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQ 91
Query: 367 VEYVCEKLAADPKLSNGFNVMGFSQG 444
V VC+ LA DPKL G+N MGFSQG
Sbjct: 92 VTTVCQALAKDPKLQQGYNAMGFSQG 117
Score = 33.5 bits (73), Expect = 1.1
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 440 RGCXFIRAVXQRCGHKLPQIKNMVSLGGQXQG 535
+G F+RAV QRC P + N++S+GGQ QG
Sbjct: 116 QGGQFLRAVAQRC--PSPPMINLISVGGQHQG 145
>AL512599-16|CAI11026.1| 279|Homo sapiens palmitoyl-protein
thioesterase 1 (ceroid-lipofuscinosis, neuronal 1,
infantile) protein.
Length = 279
Score = 103 bits (246), Expect(2) = 2e-23
Identities = 44/77 (57%), Positives = 56/77 (72%)
Frame = +1
Query: 214 MGDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVCEKLA 393
+GD+CC S+G+ K +EK IPG+YVLSL+IG +ED EN +F+N N QV VC+ LA
Sbjct: 70 IGDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQALA 129
Query: 394 ADPKLSNGFNVMGFSQG 444
DPKL G+N MGFSQG
Sbjct: 130 KDPKLQQGYNAMGFSQG 146
Score = 33.5 bits (73), Expect = 1.1
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 440 RGCXFIRAVXQRCGHKLPQIKNMVSLGGQXQG 535
+G F+RAV QRC P + N++S+GGQ QG
Sbjct: 145 QGGQFLRAVAQRC--PSPPMINLISVGGQHQG 174
Score = 27.1 bits (57), Expect(2) = 2e-23
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1
Query: 187 PTPIVLWHGMG 219
P P+V+WHGMG
Sbjct: 32 PLPLVIWHGMG 42
>AL512599-14|CAI11024.1| 177|Homo sapiens palmitoyl-protein
thioesterase 1 (ceroid-lipofuscinosis, neuronal 1,
infantile) protein.
Length = 177
Score = 33.5 bits (73), Expect = 1.1
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 440 RGCXFIRAVXQRCGHKLPQIKNMVSLGGQXQG 535
+G F+RAV QRC P + N++S+GGQ QG
Sbjct: 11 QGGQFLRAVAQRC--PSPPMINLISVGGQHQG 40
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,619,004
Number of Sequences: 237096
Number of extensions: 2061161
Number of successful extensions: 4809
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4651
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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