Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_G11
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0883 + 21279913-21280235,21281066-21281327,21281998-212821...    33   0.23 
09_04_0568 + 18591757-18592251                                         31   1.6  
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533...    29   4.9  
11_06_0016 - 19284810-19284926,19285527-19286879                       28   8.6  
04_04_0973 + 29825057-29825344,29825447-29825552,29825750-298258...    28   8.6  
01_05_0157 + 18699566-18699853,18699956-18700061,18700268-187007...    28   8.6  

>10_08_0883 +
           21279913-21280235,21281066-21281327,21281998-21282199,
           21282289-21282436,21282541-21283084
          Length = 492

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -2

Query: 653 SNIDLIPLYQVSRGWLAVLVRARIMRFPWY 564
           SN  L+PL  V   WLA++    +M FPWY
Sbjct: 405 SNAFLLPLLAVLTPWLAIIGMFFVMAFPWY 434


>09_04_0568 + 18591757-18592251
          Length = 164

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
 Frame = -3

Query: 652 QTSI*SRCTRCRE----AGWRCWCGLASCG 575
           +TS  +RC+RCR+     G+RC CG   CG
Sbjct: 98  KTSAVNRCSRCRKRVGLTGFRCRCGHLFCG 127


>07_03_1147 +
           24349811-24350161,24351031-24351366,24353260-24353376,
           24353585-24353647,24354066-24354139,24354216-24354306,
           24354791-24354850,24355270-24355462,24356242-24356522,
           24357435-24357536,24357664-24357774,24358410-24358475,
           24358562-24358660,24358757-24358788,24359171-24359274,
           24359380-24359507,24359625-24359756,24360051-24360359,
           24360887-24361071,24361161-24361263,24361407-24361552,
           24361748-24361827,24361901-24362103
          Length = 1121

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 325 WVVEKCARWAVPPPLDQDERPQPELIRPLP 414
           W + KC R+A PPP      P P  + P P
Sbjct: 37  WRLAKCPRFAPPPPQPTLPPPPPRTLPPPP 66


>11_06_0016 - 19284810-19284926,19285527-19286879
          Length = 489

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 358 PPPLDQDERPQPELIRPLPWVFFLMMLIAL 447
           PPP     RP P L   LP+ F+L   ++L
Sbjct: 90  PPPPPPPPRPAPSLASALPFWFYLTAAVSL 119


>04_04_0973 +
           29825057-29825344,29825447-29825552,29825750-29825845,
           29826335-29826690,29826980-29827721,29828064-29828083
          Length = 535

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 22/81 (27%), Positives = 35/81 (43%)
 Frame = +1

Query: 280 YRAGQTTLRYIDRALWVVEKCARWAVPPPLDQDERPQPELIRPLPWVFFLMMLIALRITR 459
           YR+G+T  R+ +  L  V +  +  +  P      P PE      W +F   L AL  T 
Sbjct: 52  YRSGETVSRHFNLCLLAVLRLHQLLLKKP-----EPIPEDTTDDRWKYFKNCLGALDGTH 106

Query: 460 ETISLANLIMGKPPLRSADVV 522
             +++   I G+   R  D+V
Sbjct: 107 IKVTVPTRIKGRYMSRKGDIV 127


>01_05_0157 +
           18699566-18699853,18699956-18700061,18700268-18700712,
           18700852-18700880,18701014-18701207,18701497-18702211,
           18702552-18702571
          Length = 598

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 22/81 (27%), Positives = 35/81 (43%)
 Frame = +1

Query: 280 YRAGQTTLRYIDRALWVVEKCARWAVPPPLDQDERPQPELIRPLPWVFFLMMLIALRITR 459
           YR+G+T  R+ +  L  V +  +  +  P      P PE      W +F   L AL  T 
Sbjct: 52  YRSGETVSRHFNLCLLAVLRLHQLLLKKP-----EPIPEDTTDDRWKYFKNCLGALDGTH 106

Query: 460 ETISLANLIMGKPPLRSADVV 522
             +++   I G+   R  D+V
Sbjct: 107 IKVTVPTRIKGRYRSRKGDIV 127


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,396,474
Number of Sequences: 37544
Number of extensions: 448132
Number of successful extensions: 1177
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1175
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)